Cervus canadensis (wapiti): 122447549
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Entry
122447549 CDS
T07554
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
122447549 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccad01009
]
122447549 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccad04515
]
122447549 (PCDH20)
Protein phosphatases and associated proteins [BR:
ccad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122447549 (PCDH20)
Cell adhesion molecules [BR:
ccad04515
]
Cadherins
Protocadherins
122447549 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
122447549
NCBI-ProteinID:
XP_043334164
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Position
9:49875169..49879874
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AA seq
951 aa
AA seq
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MRGGRDACASRARAVSWSRATWRPSPDMGSLRCPSSSASHGSLPHLLLFLLFVGPFSCLA
SHSRATEILYSLNEGLPAGVLIGSLAEDLRLLPSAGGQDLQSQPPQHRVAERSPPLSFSL
ASQGLSGQYVTLDNRSGELHTSAQEIDREALCLEGGGGTAWGSSISISSSPSADSCLLLL
DVLVLPQEYFRFVKVKIAIRDINDNAPRFPISQISVWVPENAPVNTRLAIEHPAADPDMG
TNGVQTYRLLDYHRMFTLDVEENESGERTPYLIVMGQLDRETQDQYVSVIIAEDGGSPPL
LGSATLTIGITDVNDNCPLFTDSQINVTVYGNATVGTAIAAVQAVDRDLGNNAQITYSYS
QKVPQASKDLFHLHENTGVITLFSKIGGSVLQTHKLTILANGPGCIPAVITVLVTIIKVI
FRPPEIIPRYIANEIDGIIYLKELEPANTPIAFFTIRDPEGKYKMNCYLDGEGPFRLLPY
KPYSNEYLLETTKPMDYELQQFYEIAIVAWNSEGFQVKKMIKVQLLDDNDNAPVFLQPLV
ELTIEENNAPNAFLAKLDATDADSGERGQVSYFLGSDAPSYFSLDSVTGILTVSTQLDRE
EKEKYRYTVRAVDSGKPPQESVATVVITVLDKNDNSPRFINKDFSFFVPENFPGYGEIGV
ISVTDADTGQNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGVP
PLSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSLVTEVYAVDKDTGMNAVI
AYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVRVSDHGYPEPLHSTVMVN
LFVNDTVSNESYIENLLRKEPEISIEEKEPQISIEPTHRKAESVSCMPTLVALSVISLSS
ITFLTGMGIYICLRREKKHHREDDNLEVQTPLKGRIDLHMRERKPMAISNI
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcggcagggatgcgtgcgcctcgcgggcccgggcagtgagctggagtcgggcg
acctggcgcccgagcccggatatggggagtctccgttgtcctagcagcagcgccagccac
ggaagcctgccgcatctgcttctgtttctcctcttcgtgggacctttcagctgcctagcg
agtcacagccgggccacggagattctgtacagcctgaacgaggggctgccggcgggggtg
ctcatcggcagcctggcagaggacctgcggctgctgcccagcgccggggggcaggacctg
cagtctcagcccccgcagcaccgcgtcgccgagcggagccctcctctctccttcagcctg
gcctcccaggggctgagcggacagtacgtgaccctagacaaccgctccggagagctgcac
acttctgcccaggagatcgaccgggaagccttgtgtcttgaaggaggcggagggactgcc
tgggggagcagcatttccatctcctcttcgccttctgctgactcttgtcttttgcttctg
gatgtcctagtcctgcctcaggaatactttaggtttgtgaaggtaaaaatcgctatccgg
gacatcaatgacaatgccccgcggttccctatttctcaaatatcagtttgggtcccagaa
aatgcacctgtaaacacccggctggccatagagcatcctgccgcggacccagatatgggc
actaacggtgttcagacctaccgcttgctggactaccatcgcatgttcaccctggacgtg
gaggagaatgagagcggggagcgcaccccctacctaatcgtcatgggacagctggacaga
gagacccaggaccagtatgtgagcgtcatcatagctgaggatggtgggtctccaccactg
ctaggcagtgccaccctcaccattggcataactgacgttaatgacaactgcccactcttc
acagactcacaaatcaacgtcactgtgtatgggaatgctactgtgggcacagcgatcgca
gctgttcaggctgtggacagagacttgggaaacaatgctcagatcacctactcttacagt
cagaaagttccgcaagcatccaaggatttattccatttgcatgaaaacaccggggtcatt
acacttttcagtaagattggaggaagtgttctgcaaacacacaagctcaccatccttgct
aatgggccaggctgcatccctgctgtgatcactgtcctggtgactattatcaaagtcatt
ttcaggccacctgaaatcatccctcgttatatagcaaatgagatagatggtattatttat
ctgaaagaattggaacctgctaacactccaattgcattctttaccataagagatccagaa
ggtaaatacaagatgaactgctatctggatggtgaaggaccatttaggttattgccctac
aaaccatacagtaacgagtatcttctagaaacgacaaaacctatggattacgagctacag
caattctatgaaatagccatagtagcttggaactctgagggatttcaagtcaaaaaaatg
attaaagtgcaacttttagatgacaatgataatgctcctgttttccttcaacccttggta
gaactaaccattgaagaaaataatgcacccaatgcctttttggctaagctagatgctaca
gatgctgacagtggagagaggggccaagtttcatattttctgggatctgatgctccatca
tatttttccttggacagtgtcacaggaattctgacagtttctactcagttggatcgagag
gagaaagaaaagtatagatacacggtcagagctgttgactctgggaagccaccccaagaa
tcagtagccactgtggttatcacagtgttggataaaaatgacaacagccctaggttcatc
aacaaggacttcagcttctttgtgccagaaaattttccaggatacggtgaaattggagta
attagtgtcacagacgctgatactgggcaaaacggatgggtcgctctctccgtggtgaac
cagagtgatatttttgtcatagacactggaaagggcatgctaagagccaaagtctctttg
gacagagagcagcaaagctcctatactttgtgggttgaagccgtcgatgggggtgtgcct
cccctctcctctactgcaaaaatcacaattctccttctagacattaacgacaacccacct
ctcgttttatttcctcagtctaacatgtcttacttattggtgttgccttctactctccct
ggctcactagttacagaggtctacgcagttgacaaagatacaggcatgaatgcggtcata
gcctacagcatcatagggagaagagggcctaggcctgaatcctttagaattgaccctaaa
actggcaacattactttggaggaggcattgctgcagacagattatggactccatcgttta
ctggtgagagtgagtgatcatggttatccagaacctctccattccacagtcatggtgaat
ctatttgtcaatgacactgtcagtaatgagagctacattgagaatcttttaagaaaggaa
ccagaaattagcatagaggagaaagaaccgcagatttcaatagaaccaactcatagaaaa
gctgaatctgtgtcttgtatgcccaccttagtagctctatctgtaataagcttgagttct
atcacgttcttaacagggatgggcatatatatctgtttaaggagagagaagaaacaccat
agggaggatgacaatttggaagtacagactccattaaaaggaagaattgacttgcatatg
agagagaggaaaccaatggctatttctaatatttga
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