KEGG   Cervus canadensis (wapiti): 122447549
Entry
122447549         CDS       T07554                                 
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    122447549 (PCDH20)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ccad01009]
    122447549 (PCDH20)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ccad04515]
    122447549 (PCDH20)
Protein phosphatases and associated proteins [BR:ccad01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     122447549 (PCDH20)
Cell adhesion molecules [BR:ccad04515]
 Cadherins
  Protocadherins
   122447549 (PCDH20)
SSDB
Motif
Pfam: Cadherin Cadherin_CELSR2_9th Cadherin_2
Other DBs
NCBI-GeneID: 122447549
NCBI-ProteinID: XP_043334164
LinkDB
Position
9:49875169..49879874
AA seq 951 aa
MRGGRDACASRARAVSWSRATWRPSPDMGSLRCPSSSASHGSLPHLLLFLLFVGPFSCLA
SHSRATEILYSLNEGLPAGVLIGSLAEDLRLLPSAGGQDLQSQPPQHRVAERSPPLSFSL
ASQGLSGQYVTLDNRSGELHTSAQEIDREALCLEGGGGTAWGSSISISSSPSADSCLLLL
DVLVLPQEYFRFVKVKIAIRDINDNAPRFPISQISVWVPENAPVNTRLAIEHPAADPDMG
TNGVQTYRLLDYHRMFTLDVEENESGERTPYLIVMGQLDRETQDQYVSVIIAEDGGSPPL
LGSATLTIGITDVNDNCPLFTDSQINVTVYGNATVGTAIAAVQAVDRDLGNNAQITYSYS
QKVPQASKDLFHLHENTGVITLFSKIGGSVLQTHKLTILANGPGCIPAVITVLVTIIKVI
FRPPEIIPRYIANEIDGIIYLKELEPANTPIAFFTIRDPEGKYKMNCYLDGEGPFRLLPY
KPYSNEYLLETTKPMDYELQQFYEIAIVAWNSEGFQVKKMIKVQLLDDNDNAPVFLQPLV
ELTIEENNAPNAFLAKLDATDADSGERGQVSYFLGSDAPSYFSLDSVTGILTVSTQLDRE
EKEKYRYTVRAVDSGKPPQESVATVVITVLDKNDNSPRFINKDFSFFVPENFPGYGEIGV
ISVTDADTGQNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGVP
PLSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSLVTEVYAVDKDTGMNAVI
AYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVRVSDHGYPEPLHSTVMVN
LFVNDTVSNESYIENLLRKEPEISIEEKEPQISIEPTHRKAESVSCMPTLVALSVISLSS
ITFLTGMGIYICLRREKKHHREDDNLEVQTPLKGRIDLHMRERKPMAISNI
NT seq 2856 nt   +upstreamnt  +downstreamnt
atgcgcggcggcagggatgcgtgcgcctcgcgggcccgggcagtgagctggagtcgggcg
acctggcgcccgagcccggatatggggagtctccgttgtcctagcagcagcgccagccac
ggaagcctgccgcatctgcttctgtttctcctcttcgtgggacctttcagctgcctagcg
agtcacagccgggccacggagattctgtacagcctgaacgaggggctgccggcgggggtg
ctcatcggcagcctggcagaggacctgcggctgctgcccagcgccggggggcaggacctg
cagtctcagcccccgcagcaccgcgtcgccgagcggagccctcctctctccttcagcctg
gcctcccaggggctgagcggacagtacgtgaccctagacaaccgctccggagagctgcac
acttctgcccaggagatcgaccgggaagccttgtgtcttgaaggaggcggagggactgcc
tgggggagcagcatttccatctcctcttcgccttctgctgactcttgtcttttgcttctg
gatgtcctagtcctgcctcaggaatactttaggtttgtgaaggtaaaaatcgctatccgg
gacatcaatgacaatgccccgcggttccctatttctcaaatatcagtttgggtcccagaa
aatgcacctgtaaacacccggctggccatagagcatcctgccgcggacccagatatgggc
actaacggtgttcagacctaccgcttgctggactaccatcgcatgttcaccctggacgtg
gaggagaatgagagcggggagcgcaccccctacctaatcgtcatgggacagctggacaga
gagacccaggaccagtatgtgagcgtcatcatagctgaggatggtgggtctccaccactg
ctaggcagtgccaccctcaccattggcataactgacgttaatgacaactgcccactcttc
acagactcacaaatcaacgtcactgtgtatgggaatgctactgtgggcacagcgatcgca
gctgttcaggctgtggacagagacttgggaaacaatgctcagatcacctactcttacagt
cagaaagttccgcaagcatccaaggatttattccatttgcatgaaaacaccggggtcatt
acacttttcagtaagattggaggaagtgttctgcaaacacacaagctcaccatccttgct
aatgggccaggctgcatccctgctgtgatcactgtcctggtgactattatcaaagtcatt
ttcaggccacctgaaatcatccctcgttatatagcaaatgagatagatggtattatttat
ctgaaagaattggaacctgctaacactccaattgcattctttaccataagagatccagaa
ggtaaatacaagatgaactgctatctggatggtgaaggaccatttaggttattgccctac
aaaccatacagtaacgagtatcttctagaaacgacaaaacctatggattacgagctacag
caattctatgaaatagccatagtagcttggaactctgagggatttcaagtcaaaaaaatg
attaaagtgcaacttttagatgacaatgataatgctcctgttttccttcaacccttggta
gaactaaccattgaagaaaataatgcacccaatgcctttttggctaagctagatgctaca
gatgctgacagtggagagaggggccaagtttcatattttctgggatctgatgctccatca
tatttttccttggacagtgtcacaggaattctgacagtttctactcagttggatcgagag
gagaaagaaaagtatagatacacggtcagagctgttgactctgggaagccaccccaagaa
tcagtagccactgtggttatcacagtgttggataaaaatgacaacagccctaggttcatc
aacaaggacttcagcttctttgtgccagaaaattttccaggatacggtgaaattggagta
attagtgtcacagacgctgatactgggcaaaacggatgggtcgctctctccgtggtgaac
cagagtgatatttttgtcatagacactggaaagggcatgctaagagccaaagtctctttg
gacagagagcagcaaagctcctatactttgtgggttgaagccgtcgatgggggtgtgcct
cccctctcctctactgcaaaaatcacaattctccttctagacattaacgacaacccacct
ctcgttttatttcctcagtctaacatgtcttacttattggtgttgccttctactctccct
ggctcactagttacagaggtctacgcagttgacaaagatacaggcatgaatgcggtcata
gcctacagcatcatagggagaagagggcctaggcctgaatcctttagaattgaccctaaa
actggcaacattactttggaggaggcattgctgcagacagattatggactccatcgttta
ctggtgagagtgagtgatcatggttatccagaacctctccattccacagtcatggtgaat
ctatttgtcaatgacactgtcagtaatgagagctacattgagaatcttttaagaaaggaa
ccagaaattagcatagaggagaaagaaccgcagatttcaatagaaccaactcatagaaaa
gctgaatctgtgtcttgtatgcccaccttagtagctctatctgtaataagcttgagttct
atcacgttcttaacagggatgggcatatatatctgtttaaggagagagaagaaacaccat
agggaggatgacaatttggaagtacagactccattaaaaggaagaattgacttgcatatg
agagagaggaaaccaatggctatttctaatatttga

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