Cervus canadensis (wapiti): 122447615
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Entry
122447615 CDS
T07554
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03030
DNA replication
ccad03420
Nucleotide excision repair
ccad03430
Mismatch repair
ccad03440
Homologous recombination
ccad03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122447615 (RPA1)
03420 Nucleotide excision repair
122447615 (RPA1)
03430 Mismatch repair
122447615 (RPA1)
03440 Homologous recombination
122447615 (RPA1)
03460 Fanconi anemia pathway
122447615 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122447615 (RPA1)
03032 DNA replication proteins [BR:
ccad03032
]
122447615 (RPA1)
03400 DNA repair and recombination proteins [BR:
ccad03400
]
122447615 (RPA1)
Transcription factors [BR:
ccad03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122447615 (RPA1)
DNA replication proteins [BR:
ccad03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
122447615 (RPA1)
DNA repair and recombination proteins [BR:
ccad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
122447615 (RPA1)
MMR (mismatch excision repair)
122447615 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
122447615 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
122447615
NCBI-ProteinID:
XP_043334254
LinkDB
All DBs
Position
1:complement(37425788..37470089)
Genome browser
AA seq
616 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEERLSSNCICQINRFIVNTLKDGRRVVILMELEVLKSAEAVGSKIGNPMPYNE
GHGQQPVVPPPVSAASPPTSRPQQQNGSPGVASTASKAFGASKTFGKVGSTSQMNSSGGT
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QADKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNSETSVMPCEDGHHLPTVQF
DFTGIGDLESKSKDSLVDIIGICKNYEDVTKIIVKSNNREVSKRNIYLMDMSGKVVNATL
WGDDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQ
ALDGISISDLKSGGAGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILAVNIADFQENQWVTCFQESAEAIL
GQSTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVVDVKPVDYR
EYGRRLVMNIRRNAAM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgaaggggccattgcggccatcatgcaacagggagatacatct
ataaaacccatcctccaagtcattaacatccgtcccattactacagggaatagtccaccc
cgttatcgactgcttatgagtgatggactgaatactctgtcttctttcatgttggcaaca
cagctgaatcctcttgtggaggaggagcgattgtccagcaactgtatttgccaaattaac
cgatttattgtgaacacgctgaaagatggaaggagagtggttattttgatggagttagaa
gttttgaaatcagctgaagcagttggatcaaagattggcaatccaatgccttataatgaa
ggacacggacagcagccagtagttcctcctcctgtctcagcagccagtccaccaaccagc
aggccccagcaacagaatgggagcccaggagtggcttccactgcatctaaggcttttggt
gcctcaaagacatttggaaaagttggcagtaccagccaaatgaacagttctgggggaaca
caggccaaagtggtacccatcgccagccttaccccgtaccagtccaagtggactatttgt
gctcgtgtcaccaacaaaagtcagatccgtacctggagcaactcccgaggggaagggaag
cttttctccatagaactggttgatgagagtggtgaaatcagagcgactgctttcaatgag
caagcggacaagtttttcccccttattgacgtgaacaaggtctattacttctctaaaggc
accctgaagatcgccaacaaacaattcacagccgtcaaaaatgactatgagatgaccttc
aacagtgaaacttctgtcatgccctgtgaagacggtcatcacttacccacagttcagttt
gatttcacggggattggcgacctggagagcaaatctaaagactcgcttgtagatataatc
gggatctgcaagaactacgaagatgtcacaaaaatcatagtgaagtctaacaacagagaa
gtctcgaagagaaatatctatctgatggatatgtcagggaaagtggtgaacgctaccctg
tggggagatgatgctgataaatttgatggttctagacaacccgtgatggccatcaaagga
gccagagtttctgattttggtggacggagcctctctgtactgtcttcaagcaccatcatt
gtgaaccctgacatcccagaggcctataagcttcgtggatggtttgactcagaaggacaa
gccttagatggcatttccatctctgatctaaagagtggaggagcaggtgggagcaacacc
aactggaaaactttatatgaggtcaagtcggagaacctgggccaaggcgacaagcctgac
tattttagctctgtggcaaccgtggtgtatcttcgcaaagaaaactgtatgtaccaggcc
tgcccaactcaggattgcaacaagaaagtgattgaccagcagaacggattgtaccgctgc
gagaagtgtgacagtgaattccccaatttcaagtaccgcatgattctggcagtcaatatt
gcagattttcaagagaatcagtgggtcacgtgtttccaggagtctgcagaggccatcctt
ggacaaagcactgcttatctcggggagttaaaggagaagaacgagcaagcatttgaggaa
gttttccagaatgccaactttcgatcttttacgttcaggatcagggtcaaactggagacc
tacaatgatgagtctcgaattaaggccacggtggtggacgtgaagcctgtggactacaga
gaatacggcagaaggctggtcatgaacatcaggaggaacgcggcgatgtga
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integrated database retrieval system
