Cervus canadensis (wapiti): 122447880
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Entry
122447880 CDS
T07554
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122447880 (VPS53)
Membrane trafficking [BR:
ccad04131
]
Protein recycling
Others
EARP complex
122447880 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
122447880 (VPS53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
FBF1
Sec8_N
Laminin_II
Syndetin_C
NBD94
COG3_N
hAT-like_RNase-H
COG5_N
MCPsignal
FUSC
Motif
Other DBs
NCBI-GeneID:
122447880
NCBI-ProteinID:
XP_043334550
LinkDB
All DBs
Position
1:complement(38113422..38236550)
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AA seq
832 aa
AA seq
DB search
MMEEEELEFVEELEAVLQLTPDVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQG
VMNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGTKRPGGPSNVLRD
ACQVANILDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPREWYMAERIAVEFCHITRTELAKIMRTRAKEIEVKLLLFAIQRTTNFEGFLAK
RFSGCTLTDGTLKKLESPPASTNPFLEDEPAAEMEELAMEKGDLEQPKKPKAPDNPFHGI
VSKCFEPHLYVYIESQDKNLGELIDRFVADFKAQGPPKPNTDEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSGGLTISSLLKEKEGSE
AAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLIERINLTGEMDTFSTVISS
SIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR
KYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRK
APASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETFQKILDMKGLKR
SEQSSMLELFRQRLPAPPSGPEGSSSLSLLAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaggaactggagttcgtagaagagctggaagccgtgctgcagctcacg
cccgacgtgcagctcgccatcgagcaggtatttccaagccaggatcctctagatcgagca
gatttcaatgctgtggagtatatcaacaccctgttcccaacagaacaatctctggcaaac
attgatgaagttgtgaacaaaattagactgaaaataaggagactggatgacaacattcga
actgtcgtaagaggtcaaacaaatgtgggacaggatggcaggcaagcacttgaagaggcc
cagaaagcgatacagcagctcttcggaaaaatcaaagatatcaaagacaaagcagaaaaa
tcagagcaaatggtgaaggaaatcacccgcgacattaagcagttagatcatgccaaacgc
cacctgaccacctcgatcacaacgctgaaccacctgcacatgctggcgggtggcgtggat
tccctcgaagccatgaccaggcgaaggcagtatggagaagttgctaatcttcttcagggc
gtaatgaatgttctggagcacttccacaaatatatgggcattccacagatccggcagctt
tctgaaagagtgaaggcggcccagactgagttaggacagcaaatcctggccgattttgaa
gaagcttttccttcccagggcaccaagaggccaggaggacccagcaacgttctacgagat
gcatgtcaggttgctaatatcttggaccccagaatcaaacaggaaatcatcaaaaagttt
attaaacagcatctgtcagagtacctagtactttttcaagaaaatcaagatgttgcctgg
ctggacaaaatcgaccgtcgctatgcctggatcaaacgccagctcgtggactacgaggag
aaatatggccgaatgttcccacgtgaatggtacatggcggagagaattgctgtagaattt
tgccacatcacaaggacagaacttgccaagatcatgcgtacaagagctaaggaaattgaa
gtgaaattgcttctctttgctattcaaagaacgactaactttgaggggtttcttgcaaaa
cgtttttccgggtgcaccctgacagatggaacgctgaaaaaactcgaatctccacccgct
tccaccaatcccttcctggaagatgagccagcagcagagatggaggaactggcgatggag
aaaggagatttagagcaacctaagaagcctaaagccccagacaatccatttcacggcatt
gtttccaagtgttttgagccgcatctctacgtgtatattgagtcccaggacaaaaacctt
ggagagctgatagatcggtttgtggccgatttcaaggcccagggcccacctaagcccaac
acggacgaggggggtgccgtgctccccagctgcgctgacctctttgtctactacaagaag
tgcatggtgcagtgctcgcagctcagtaccggggagcccatgatcgccctgaccaccatt
ttccagaagtacctccgcgaatacgcctggaaaatcctctctggcaacctgcccaaaacc
acaagcagcagcggcgggctgaccatcagcagcctgctcaaggaaaaggagggctccgag
gcggccaagttcaccctggaggagctctgcctcatctgcagcatcctgagcaccgccgag
tactgcctggccaccacccagcagctggaagagaaactcaaggagaaggtcgatgtgagt
ctgattgaacgaatcaatctgactggagaaatggacacattcagcactgtcatctccagc
agcattcagctgttggtccaggacctggatgctgcctgcgaccctgcccttacggccatg
agcaagatgcagtggcagaatgtggagcatgttggtgaccagagcccctatgtcacctcg
gtcatccttcacattaaacagaacgtccccatcatccgtgacaacctggcctccacgcgg
aaatacttcacgcagttctgcattaaatttgcaaactccttcattcccaagttcatcacc
cacctcttcaagtgcaagccaatcagcatggtgggggcagaacagctactgctggacacg
cactccctgaagatggtcctgcttgatctgccttccatcggctctcaggtggtgaggaaa
gccccggccagttacaccaagatcgtggtgaaaggcatgacccgcgcggagatgatcctc
aaggttgtgatggcccctcatgagccattggtggtatttgtggacaattacatcaagctc
ctgacagactgcaacacagaaaccttccagaagatcctggacatgaaggggctgaagcgg
agcgagcagagcagcatgctggagctcttccgccagaggctccccgccccgccctcaggg
cctgaaggctccagctccctgtccctcctggctccaactccagaacaggagtcctcgcgc
atccgcaaactggagaaactgattaaaaagagactgtag
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