Cervus canadensis (wapiti): 122448005
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Entry
122448005 CDS
T07554
Name
(RefSeq) interferon regulatory factor 4-like isoform X1
KO
K09445
interferon regulatory factor 4
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04659
Th17 cell differentiation
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
122448005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122448005
Transcription factors [BR:
ccad03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
122448005
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
zf-C2H2_FBX41
Motif
Other DBs
NCBI-GeneID:
122448005
NCBI-ProteinID:
XP_043334778
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All DBs
Position
10:complement(60228125..60238340)
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AA seq
495 aa
AA seq
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MPSRPGDTGWGERASREQKGKRNFLPRLSLSPPPRCPGGPRARSLVALGFGHPRAPDLVP
GAQRSPMAGDPWRRDKGKVSDRRRSMEGAGGPLRLREWLVAQIESGRYAGLRWEDAGKTL
FRIPWKHAAKQGYQVRQDAALFRAWAIYKGKHLEGIDKEDPSTWKTRLRCALNKSADFCE
VRERSQLDISNPYKVYRLLSDGAHDPVTRACAPGKEEGILQSQQKPPGGVTEPACRTEEQ
DVSGLVTEDKDKEQPSRLAQQDSLLPSPLADHSYQAQNPAHPWGPLPSENFSNPADCWLH
VRLFYRAELVREATALAAEGCRLSPRAAAAAAERLLGPPPRVAQVRFPEPPAGAHVLRRL
LPHLERGVLLWVAPEGVFAKRLCQGRVYWRGPLAPHRARPNKLERERTCQLLDTRRFLAE
LRAHLQDGHPEPEYQIRLCFGEEYPGPPDQPEERLIMAHVEPVFARELLLHSKIHGQMPR
CQVPSGASPTASLTC
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgccctccaggccaggcgacacagggtggggcgaaagggcctccagggagcagaaagga
aagcgaaacttcctacccagactttcgctttcgccgcctccgcgctgtccaggtggcccc
cgcgcgcgatcccttgtcgccctggggttcggccacccgcgcgccccagacctggtcccc
ggagcacagcgttcccctatggccggcgacccctggcggagggacaaagggaaggtctcc
gaccgcagacgatccatggagggggccgggggtcccctgcgcctccgagaatggctggtg
gcgcagatcgagagcgggcgctatgcggggctgcgctgggaggacgcaggcaagaccctc
ttccgcatcccctggaagcacgcagccaagcagggttaccaggtgcggcaggacgctgcg
ctcttcagggcctgggccatatacaagggcaagcacctagagggcattgacaaggaggat
ccctctacttggaagacacggcttcgctgtgccctcaacaagagtgctgacttctgtgaa
gtacgtgagcgcagccagctggacatctccaacccctacaaggtctaccggctcctgtct
gatggtgcccacgacccagttaccagggcttgtgcccccggtaaagaggagggcattctt
cagagccagcagaagccccctggaggagtgacagagccagcctgcaggacagaagagcag
gatgtatccggattagtcacagaggataaagacaaggagcagccctccaggctagcccag
caggactccctgctcccaagccctttggctgaccacagctaccaggcacagaatcctgct
cacccctggggccctttgccctctgagaatttcagcaaccctgcagattgctggctgcac
gtgcgactcttctaccgcgcggagctggtgcgcgaagccacagcgctggcggccgagggc
tgccgcctgagcccgcgcgcggccgccgcggccgccgagcgactgctggggccgccgccg
agggtggcgcaggttcgtttcccggagccgccggccggcgcccacgtgctgcggcgcctg
ctgccgcacctggagcgcggcgtgctgctgtgggtggcgcccgagggcgtcttcgccaag
cgcctgtgccagggccgcgtgtactggcgcggcccgcttgccccgcaccgcgcgcggccc
aacaagctggagcgcgagcgcacctgtcagctgctcgacacgcgccgcttcctcgcggaa
ctgcgagcccatctgcaggatggtcacccggagcccgagtaccagatccggctgtgcttt
ggtgaggagtacccagggcccccggaccagcccgaggagcggctcattatggcccatgtg
gagccagtcttcgccagggagctcctcctgcactcgaagatccacggccagatgcccagg
tgtcaggttcccagcggagcatccccgacagcatcactcacctgctga
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