Cervus canadensis (wapiti): 122448023
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Entry
122448023 CDS
T07554
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04082
Neuroactive ligand signaling
ccad04721
Synaptic vesicle cycle
ccad04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122448023 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
122448023 (SLC6A4)
04721 Synaptic vesicle cycle
122448023 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccad02000
]
122448023 (SLC6A4)
Transporters [BR:
ccad02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
122448023 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
122448023
NCBI-ProteinID:
XP_043334824
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Position
1:39029927..39064130
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AA seq
630 aa
AA seq
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METTPLNSQKELSAYKDGEDCQENGVLQKGVPAPGDRAESGQISNGYSAVPNPGAEDDTQ
HSIPAATTTLVAEVHSAGRETWSKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWTKICPIFKGIGYAICLIAFYIASYYNTIM
AWALYYLISSFTEQLPWTSCKNSWNTGNCTNYFSEDNITWMLHSTSPAEEFYTRHVLQIH
QSKGLQDLGGLSWQLVLCIMFIFTIIYFSIWKGVKTSGKVVWVTATFPYIILLILLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFHNNCYQD
ALVTSAVNCMTSFVSGFVIFTVLGYMAEMRKEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIVFFLMLITLGLDSTFAGLEGVITAMLDEFPHIWAKRREWFVLGVVITCFFGSLVT
LTFGGAYVVKLLEEFATGPAVLTVALIEAVAVFWFYGINQFCSDVKEMLGFSPGWFWKIC
WVAISPLFLLFIICSFLMSPPQLRLFQYDYPQWSIILGYCIGTSSFICIPTYITYRLIVT
PGTLKERIIKGVTPETPTEIPCGDIRLNAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaccccgttaaattcccagaaggagctgtcagcgtataaggatggagaagat
tgtcaggaaaatggggttctacagaagggtgtccctgcccctggggatagggcagagtcc
ggccagatctccaatgggtactcagcagttccgaaccctggcgcggaagacgacactcag
cactccatcccggctgccaccaccaccctggtggctgaggttcattccgcagggcgggag
acctggagcaagaaggtggatttcctcctttctgtcattggctatgctgtggacctgggc
aacgtctggcgctttccctacatttgttaccagaacggagggggggcgttccttctcccc
tacactatcatggccatttttggggggatcccgctcttctacatggaactcgcactgggg
cagtaccaccgaaatggatgcatttccatatggacgaaaatctgcccaattttcaaaggg
ataggttacgccatctgcctcatcgccttctacatcgcctcctactacaacaccatcatg
gcctgggccctctactacctcatctcctccttcacggagcagctgccctggaccagctgc
aagaactcctggaacactggcaactgcaccaactacttctctgaggataacatcacctgg
atgctccactcaacatcccctgcagaagaattttacacgcggcacgtcctgcagatccac
cagtcgaaggggctccaggacctggggggcctcagttggcaacttgtcctgtgcatcatg
ttcatcttcaccattatctactttagcatctggaaaggtgttaaaacatctggcaaggtg
gtttgggtgacagccaccttcccttacatcattcttttgatcctgctggtgaggggggcc
accctccctggagcctggaggggagttctcttctatttgaaacccaactggcagaaactc
ctagagacaggggtgtgggtggatgcggccgcccagatcttcttctctctcggccctggc
tttggggtcctactggcttttgcgagctacaacaaattccacaacaactgttaccaagac
gccctggtgaccagtgcggtgaattgcatgacgagcttcgtttcaggatttgtcatcttc
acggtgctggggtatatggctgagatgaggaaagaagatgtgtctgaggtggccaaagat
gcaggccccagcctcctgttcatcacatatgcagaagccatagccaacatgccggcatcc
acattctttgccatcgtcttcttcctgatgttaatcaccctgggcttggacagcacgttt
gcaggtttggagggggtgatcacagccatgctggatgagtttccacacatctgggccaag
cgccgggagtggtttgtgcttggcgtggtcattacctgcttctttggctccctggtcacc
ttgactttcggtggggcctacgtggtgaagctgctggaggagtttgccacgggacctgca
gtgctcaccgtggccctgatcgaagcagttgctgtgttttggttctacggcatcaatcag
ttctgcagtgatgtgaaggaaatgcttggtttcagccctggatggttttggaagatctgc
tgggtagccatcagtcctctgtttctcctgttcatcatctgcagttttttgatgagccca
ccacagctacgacttttccagtatgattatcctcagtggagcatcatcctgggttactgc
ataggaacctcatctttcatctgcatccccacatatataacttaccggctgattgttact
ccagggacacttaaggagcgtattattaaaggtgtcaccccagaaacaccaacagagatt
ccctgtggggacatccgcttgaatgctgtgtaa
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