Cervus canadensis (wapiti): 122448175
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Entry
122448175 CDS
T07554
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad05202
Transcriptional misregulation in cancer
ccad05206
MicroRNAs in cancer
ccad05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
122448175 (ZEB1)
05206 MicroRNAs in cancer
122448175 (ZEB1)
09162 Cancer: specific types
05215 Prostate cancer
122448175 (ZEB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122448175 (ZEB1)
Transcription factors [BR:
ccad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
122448175 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
zf-C2H2_6
Zf-C2H2_ZNF451_C
zf-C2HE
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
122448175
NCBI-ProteinID:
XP_043335199
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All DBs
Position
10:complement(35596024..35791129)
Genome browser
AA seq
1127 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNTVVETNSDSDDEDKLHIVEEESITDAADCEGGVPDD
DLPSDQTVLPGSSAREGSAKSCWEDDAGKEGQEILGPEARADEVGCAVKDDECDSDAENE
QNHDPNVEEFLQQQDTAVIYPEAPEDDQRQGTPEASGHDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLERHMTSHKSGREQRHVTQSGGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCISLMPVN
GRPRTGLKTSQCSSPSLSASPGSPTRPQMRQKIENKPLQEQLPVNQIKTEPVDYEFKPIV
VASGINCSAPLQNGVFSGGGPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENNQANLASKEQETINASSIQQGGHSVISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKETPVPTNNCKSEKLPEDLTVKSEKDKSFEGGGNDSTCLLCDDCPG
DINALPELKHYDLKQPAQPPPPPTPEAAKPEASAPSGSGDGSLSPSQPPLKNLLSLLKAY
YALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQISVQSSEPSSPEPGKANTPAKSD
DQPQAADADEAQDSTGNRQSPLKRASSPVLPGGSAVNGSRSSASSPSPLNLSSSRSAQGY
SYPTEGAQEEPQVEPLDLSLPKQQGELLERPTITSVYQNSVYSVQEEPLNLSCAKKEPQK
DSCVTDSEPVVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIP
QVAYTYSTAVSPAVQETPLKVIQPNGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEEREPPEPGAAGPGVPPEQHAGQGDSDER
ESSTREEDEDSDKEEEEEEEERELEELEEEKGSGAARGPEEVEEEVEDGEEEMDDEEDED
EEAEDEGERAETEGVGQGVGAGSQAHSLEHKVSEGSEQVSEEKTNEA
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgcggcgcaataacgtt
acaaattataatactgtggtagaaacaaactcagattcagacgatgaagacaaactccat
attgtggaagaagaaagcatcacagatgcagccgactgtgaaggcggcgtgccagacgat
gacctgccctcagaccagacagtgttgcccgggagcagcgcaagagaagggagcgcaaag
agctgctgggaggacgatgcaggaaaggaaggacaagaaatcctggggccggaagctcgg
gcagatgaagtgggatgtgcagtaaaagatgatgaatgcgactcagatgcagaaaatgaa
caaaaccatgatcctaacgttgaagagttcctgcaacaacaagatactgcagtcatctac
ccagaggcacctgaggacgaccagaggcagggcacgccggaggccagcgggcatgacgaa
aacggaacaccagatgcattttcccagttgctcacctgtccgtattgtgacagaggatat
aaacgctttacctctctgaaagaacacattaagtatcgccacgagaagaatgaagacaac
ttcagctgctccctgtgcagctacacgtttgcatacagaacccagctcgagcgccacatg
acctcccacaaatcaggacgagagcagagacatgtgacgcagtctgggggtaatcgtaaa
ttcaagtgcactgaatgtggaaaagctttcaaatacaaacaccatctaaaagagcactta
agaatccacagtggagagaagccatatgaatgcccaaactgcaagaaacgtttttcccat
tctggttcctacagctcacacataagcagtaagaaatgtatcagcctgatgcctgtgaac
gggcggccaagaacagggctcaagacctcgcagtgttcctcaccctccctctcggcctct
ccaggcagtcccacgcgaccacagatgcggcagaagatagagaacaagccccttcaagag
caacttcccgtaaaccagattaaaactgaacctgtggattatgagttcaaacccatagtg
gttgcttcaggaatcaactgttcagcccctctacagaacggggttttcagtggtggtggc
cccttacaggcaaccagttctcctcagggtgtggtgcaggccgttgttctgccaacggtg
ggtttggtgtcccccatcagcatcaatttaagtgatattcagaatgtacttaaagtggcg
gtagatggtaatgtcatcaggcaagttttggagaataatcaagccaatcttgcatccaaa
gaacaagaaacaatcaatgcttcatccatccagcaaggcggccattctgttatttcagcc
atcagtcttcctctggttgatcaagatggaacaaccaaaatcatcattaactacagtctt
gaacaacctagccaacttcaagttgttcctcagaatttgaaaaaagaaaccccagtccct
accaacaattgcaaaagtgaaaagttaccagaagatcttactgttaagtctgagaaggac
aaaagctttgaagggggagggaatgacagcacttgcctcctgtgtgacgactgtcccggg
gacatcaatgcacttccagagctaaagcactatgacctgaagcagcccgcccagccccct
ccgccccccaccccagaagctgccaagcccgaggcctccgctccatcggggtccggagat
ggcagtttgtctcccagtcagccacctttaaagaacctcttgtctcttctgaaagcatat
tatgctttgaacgcacagccaagtgcagaagagctctcaaaaattgctgattccgtgaac
ctaccactggatgtagtgaaaaagtggtttgaaaagatgcaagcaggacagatctcagtg
cagtcttctgaaccatcttccccagaaccaggcaaagccaacacccctgccaagagcgac
gatcagcctcaggctgcagatgcagatgaagcccaggacagcacagggaaccgccagagc
cctctgaagagagctagctctcccgtcttaccagggggctcggccgtcaatggttccaga
agcagcgcctcctccccttcccccctgaacctctcttcctccagaagcgcacagggttac
tcgtacccgacagaaggggcgcaggaagagccgcaggtcgaacctcttgatctctcacta
ccaaagcagcagggcgagttattggaaaggccaactatcactagtgtttaccagaacagt
gtttattctgtccaggaagaacccttgaacttgtcttgtgcaaaaaaggagccacaaaag
gacagttgtgttacagactcagaaccagttgtaaatgtaatcccaccaagtgccaacccc
ataaatattgctattcctaccgtcactgcccagttacccacgatcgtggccatcgctgac
cagaacagcgttccgtgcttgcgagcactggctgccaacaagcagaccatcctgatcccc
caggtcgcctacacatactcgaccgcagtcagcccagcggtccaggaaacacccttgaag
gtgatccagcccaatggaaatcaggatgaaaggcaagacactagctcagaaggagtatcc
aacgtagaggatcagaacgactccgattccacgccccccaaaaagaaaatgcggaaaaca
gaaaacggaatgtatgcttgtgatttgtgtgataagatatttcaaaagagtagctcactg
ttgagacataaatacgaacacacaggtaaaaggccccacgagtgtggcatctgcaaaaag
gcgtttaaacacaagcatcacctgatcgagcacatgcgcctgcactccggggagaagccc
taccagtgcgacaagtgcgggaagcgcttctcccactcgggctcctactcccaacacatg
aaccaccgctactcctactgcaagagggaggccgaggagcgggagccccccgagccgggg
gccgcgggcccgggggtcccgcccgagcagcacgcggggcagggcgactcggatgagagg
gagagctcgacgcgggaggaggacgaggacagcgacaaggaggaggaagaggaggaggag
gagcgggagctggaggagctggaggaggagaagggaagtggagcggcgcgagggccggag
gaggtggaggaggaggtggaggacggggaggaggagatggacgatgaggaggacgaggac
gaggaggcggaggatgaaggggagagagcagaaacggaaggtgtggggcagggggtgggg
gctggaagccaagcccacagcttagaacacaaagtcagtgagggcagcgagcaggtgtcc
gaagagaaaacaaatgaagcctaa
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