Cervus canadensis (wapiti): 122448300
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Entry
122448300 CDS
T07554
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
122448300 (COL20A1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
Ig_DSCAM-DSCAML_C
VWA_3
Motif
Other DBs
NCBI-GeneID:
122448300
NCBI-ProteinID:
XP_043335457
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All DBs
Position
10:complement(53237142..53260398)
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AA seq
1351 aa
AA seq
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MLPGDRSRLRTMSVHVRPHLGVGICLYLSVTLGLSQGQASGRLRLAVLPEDRLQMKWRES
EGSSLGYLVQVKPRAGDPEQEVMLTTKTPKATVGGLSPSKGYTLQIFELTGSGNVLLARR
EFVIEDLKSNSVSRSGQRPLGATLEPTPSHVGSPDLEPPRVLAPSQDPPTLGGSKSGDGV
PGEEQHPPRGPTGEGPAQPTPDLEGQNHARTSAGGRGEPGRPQFRCTPPTPADMIFLVDG
SWSIGHSHFQQVKDFLASVIEPFEIGPGKVQVGLTQYSGAPQTEWDLNAFSTKEEVLSAV
HNLRYRGGNTFTGLALTHVLEQNLKPRAGLRPEAAKLVILVTDGKSQDDAHAAGHVLKGL
GVDIFAVGVKNADETELRLLASQPLDITVHNVQDFPQLSTLSGLLSRLICQKVQGRSLRG
GPATPALDPPPAPTRLVLTQVTSSSVLLSWSPAPQPPLKYLIVWRPSKGGTPREVVVEGR
TSSAQLHNLTSSTEYLVSVFPIYKAGVGEGLQGLATTAPLPPPQALILAAVTPKTVRLTW
QPSAEATQYLVRWSPASPKGEEERREVRVGWPEVLLDGLAPGRDYEVWVQSLRGAETSEA
QGIRARTPALATPRHLSFSDVSHDSARVSWEGTARPVRLFRVSYISSKGGHSGQTEVPGN
ATSATLGPLSSSTTYTVRVTCLYPGGSSSTLTGRLTTRKVPSPSQLSVTELPGDEVRLQW
AAAAVSGVLVYQITWTPLGEGKAREISVPGNLGTAILPGLGRHSEYEITILAYYRDGARS
DPVSLRYTPVSRSPPSNLALASESPDSLRVSWTPPSGHVLHYRLSYALASGSGPEKWISV
PGPGSHVTIPDLLAATKYRVLVSAVYGAGESMAVSATGRTAACPALHLDSSLPGFDLMVA
FGLVEKEYASIRGVAMEPSAFGPTRTFTLFKDSQLTRRASDIHLATLPPEHTVVFLLRLL
PETPREAFALWQVASEDFQPILGVLLDAGRKSLTYFNRDPRATLQEVTFDLPEVRRIFFG
SFHKVHVAVGRSKVRLYVDCRKVAERPIGEAGSLPAAGFVMLGRLAKARGPRSSSASFQL
QVLQIVCNDSWAEEDRCCELPASKERESCSAFPSACACSLKTPGPPGPQGPPGLPGRNGA
PGEQGFPGPRGEPGPPGQMGPEGPGGQQGSPGTQGRTIQGPVGPPGVKGEKGDHGHPGLQ
GHPGLQGTPGKVGVQGPKGMRGLEGTAGLPGPPGPRGFQGTAGARGSHGERGPPGAVGPT
GLPGPKGERGEKGEPQSLATIYQLVGQACESAIQAHVLKLHACTHESTRPPMPILEAPRA
LGTSSKARLPGEVGHGGPRPGDRGRSPCCLE
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctggggacagaagcaggctgcgcaccatgagcgtccatgtacgtcctcacctt
ggagtcggcatctgtctgtatctgagtgtcaccctggggctcagccagggacaagcgagt
ggccgcctgaggctggcggtgctgcctgaggaccggctgcagatgaagtggagagagtca
gaggggagcagcctcggctacctggtgcaggtgaagcccagggcaggggacccagagcag
gaggtgatgctgaccaccaagacccccaaggccactgtggggggcctgagcccctccaag
gggtacaccttgcagatcttcgagctcactggctcagggaacgtcctgctggctcgcagg
gagtttgtgatcgaggatctgaagagtaactccgtgagcaggagtggccagaggccactg
ggggcaaccctggagcccaccccctcccatgtggggagcccagaccttgagcccccaagg
gtcctggctccaagtcaagacccgcccacacttggtgggtccaagtcgggtgacggagta
cctggcgaggagcagcacccacccaggggccccacaggggagggccctgctcagcccact
ccagatctggaggggcagaaccacgccaggacctcggctggagggagaggggagccaggc
agaccccagttccgctgcactccccccacgcctgcagacatgatcttcctggtggatggg
tcctggagtataggccacagtcacttccagcaggtcaaagacttcctggccagcgtcatc
gagccctttgaaatcgggccaggcaaagtccaagtaggcctgactcagtacagtggagct
ccccagaccgagtgggacctgaatgcctttagcaccaaggaggaggtgttgagtgctgtg
cacaacctccgctacagaggaggaaacacgttcacaggcctggccctgacccacgtgctg
gagcagaacctgaagcccagagcaggtctccgtccagaggcagccaagctggtgattctg
gtgacggacggcaagtcccaggacgatgcccacgctgctggccatgtgctcaagggtctg
ggtgttgacatctttgctgtgggcgtgaagaatgccgatgaaaccgagctgaggctcctg
gcctcccagccgctggacatcactgtccacaacgtgcaggacttcccccagctcagcacg
ctctccggcctgctcagccggctcatctgccagaaggtccagggcaggagcctgcgtggg
ggcccagctacaccggccctggacccccctcccgctcccaccaggctggtcctgacccag
gtgacctcctccagcgtcctcttgtcctggagcccagccccacagccgcccctcaagtac
ctgattgtgtggaggccttccaagggcggcacccccagggaggtggtggtggaagggcgc
acctcgtcagcacagctgcacaacctgacctccagcactgagtacctggtctctgtgttc
cccatctacaaggctggcgtcggcgagggcctgcagggcctggcgaccacagcacccctg
cccccaccccaggcgctgatcctggctgcagtgacacccaaaactgtccgcctcacttgg
cagccctcagcagaggccacccagtacctggtgcggtggtcacctgcctcccccaagggc
gaggaggagaggagagaggtgcgggtggggtggccagaggtgctgctggatggcctggcc
ccaggcagggactatgaggtgtgggtgcagagccttcgaggggcagagaccagcgaggcc
cagggcatccgtgccaggacccctgccctggccacccccagacacctgagcttctcagac
gtgagccatgattcagcccgcgtgtcctgggagggcaccgcaagacctgtgcgcctgttc
agggtcagctacatctccagcaagggaggccactcgggacagacggaggttcctgggaac
gccacctcggccaccctgggccccctctcctcctccaccacatacacggtccgcgtcacc
tgcctctatcctgggggcagctcctccaccctgaccggccgcctgaccacacggaaagtc
cccagcccgagccagctgtcggtgacagaactgcctggggacgaagtccggctccagtgg
gcagccgcggcggtgtccggcgtgctcgtctaccagatcacgtggacgcccctgggagag
gggaaggcccgtgagatttctgtcccggggaacctgggcacggccatcctgcctggcctg
gggaggcactcagagtatgagatcaccatcctggcctactaccgggacggggcccgcagc
gaccctgtgtccctccgttatacccctgtcagccggagcccaccctccaacctggccttg
gcctcagagtcgcctgacagcctgcgggtcagctggacgcccccgagcggccacgtgctc
cactaccggctctcctatgcgctggcctcaggctccggacctgagaagtggatctccgtt
ccaggacctgggagccacgtgacgatccctgacctgctggcggctaccaagtaccgggtc
ctggtctcagccgtctatggagcaggggagagcatggcggtgtctgccactggccgaacg
gcagcctgcccggccctccacctggacagctccctcccaggctttgacctgatggtggcc
ttcgggctggtggagaaggaatacgcctccatccgtggtgtggctatggagccctcagcc
tttggccccaccaggaccttcacgctcttcaaggactctcagctgacccgtcgggccagt
gacatccacctggccaccctgcccccagagcacacggtcgtcttcctcttgcgcctgctc
cctgagacgccccgagaggcctttgcactgtggcaggtggcgagcgaggacttccagccc
atcctcggggttctgctggatgctggcaggaagtcgctgacctacttcaaccgtgacccc
agggccaccttgcaggaggtcaccttcgacctgcccgaagtgaggaggatattctttggg
agtttccacaaggtgcacgtggccgtgggccgctccaaggtcagactctacgtggactgc
cggaaggtggctgagaggcccattggggaggccggcagcctgcccgctgctggcttcgtc
atgctggggaggttggccaaagcccggggcccccggagcagttcagcctcgttccagctc
caggtgctacagattgtgtgcaatgactcctgggcagaggaggacaggtgctgcgagctc
ccagcatcgaaggagcgagagtcctgctctgccttcccatctgcctgtgcatgttccttg
aagacccctgggcccccgggcccccaaggacctccgggcctccccgggaggaacggagcc
ccaggagagcaaggcttcccagggcccaggggagagcctgggccacctggacagatggga
cccgagggccctgggggtcagcaggggtcaccgggcacccagggccgcaccatccaggga
cctgtgggtccgccaggggtcaaaggagagaagggggaccatggacaccccggcttgcag
ggccaccccggcctccagggcacccccgggaaggttggcgtccagggaccgaagggaatg
agaggcctggaggggactgctggactgcctggccccccaggccctaggggcttccaaggt
actgcgggggccaggggcagccacggcgagcgaggacccccaggggccgtggggcccaca
gggctgccggggcccaagggggagcgaggagagaagggagagccacagtccctggccacc
atctaccagcttgtgggccaggcctgcgagtccgccatccaggcacacgtgctgaagctc
catgcctgtacccacgagagcacccggccccccatgcccatcttggaggcccccagggcc
cttggcacgagcagcaaggcccggctccccggagaagtggggcatggtggcccccgccct
ggggacagaggacggtccccctgctgcctcgagtga
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