Cervus canadensis (wapiti): 122448317
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Entry
122448317 CDS
T07554
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccad03021
]
122448317 (SUPT6H)
03036 Chromosome and associated proteins [BR:
ccad03036
]
122448317 (SUPT6H)
Transcription machinery [BR:
ccad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122448317 (SUPT6H)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
122448317 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
122448317
NCBI-ProteinID:
XP_043335483
LinkDB
All DBs
Position
1:complement(40178194..40209009)
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVNKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEGEEDEGSDSGDSEDEVSHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKVSDDEDDEEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAHMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRVREEGDEEGDGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNISPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
DEGLLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELIDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDLKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQV
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFNAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagcgaggccgaggagtccgaggaagagtacaatgatgaaggc
gaggtggtgccccgggtcaacaagaaatttgtagaagaggaggatgacgatgaggaggag
gaggaggagaacctggatgatcaggatgaacaaggaaacctgaaaggctttatcaatgat
gatgatgatgaagaggaaggggaggaggatgagggtagtgactctggagattcggaagat
gaagttagccacaagaagagaaaacgcacatcttttgacgaccgcctggaggatgatgat
tttgatctcattgaggagaatttgggtgtcaaagtcaaaagaggacaaaaataccgacgt
gtcaaaaaagtctcagatgatgaggacgacgaggaggaggaatatggcaaggaagaacat
gaaaaagaagctatcgcagaggagatctttcaggatggggaaggggaagaagggcaggag
gccgtggaggcccacatggctcctccagaagaggaggaggaagatgatgaagagtcagat
attgatgactttattgtggacgatgatggacaacctctgaaaaaacctaagtggcggaaa
aagcttcctggatacactgatgcggctctgcaggaagcccaggagatttttggtgtggac
tttgactacgatgaatttgagaaatacaatgagtacgacgaagaactggaggaagagtat
gagtatgaggacgatgaggctgagggcgagatccgagtgcgccccaagaagaccaccaag
aaacgtgtgagccgcaggagcatcttcgagatgtatgagcccagtgagctggaaagcagc
cacctcaccgatcaggacaatgaaatccgagccactgacttgcctgagagattccagctc
cgttccatccccgtcaagggggctgaagatgatgaactggaagaagaggcagactggatc
tacaggaatgcctttgccacaccaaccatttctctgcaggaaagctgtgattacctagac
cgagggcagccaaccagcagcttcagtcgaaaagggcccagcacaattcagaagattaaa
gaggccctgggcttcatgcgaaatcagcattttgaggtgcctttcattgctttctaccgg
aaggagtatgtggagcctgagttgcatatcaacgacctgtggagggtgtggcagtgggat
gaaaagtggacccagctgaggattcgtaaggagaacctaacacggctgtttgagaagatg
caggcttatcagtacgagcaaatctctgctgatcctgacaagccccttgctgatggcatc
cgggctctggacaccacggacatggagaggctgaaggatgttcaatcaatggatgaactg
aaagatgtctacaatcatttcctgctctattacggtcgtgacatccctaagatgcagaat
gccgccaaggccagccgcaagaagctaaagcgtgtaagggaagagggagatgaggaaggt
gatggtgaggaggcagaagatgaagagcagagagggccagagctcaagcaggcttctcgc
cgagacatgtacaccatctgccagagcgctgggctagatggcctggccaaaaagtttggg
cttactcctgagcaatttggggaaaatctccgggacagctaccagcggcatgagacggag
cagtttccagcagagcccttggaactggcgaaggattatgtttgcagccagttccctacc
ccggaagccgtgctggaaggtgcccgctacatggtagccctgcagattgcccgagagccc
ctcgtccggcaggtgctgagacagactttccaggaaagggccaagctcaatataagcccc
actaagaaaggtagaaaggatgtggatgaggcccactacgcttactccttcaagtactta
aagaacaagcctgttaaggaactgagagatgaccagttcctcaagatctgcctggctgaa
gatgaagggctgctcaccattgatatcagcatcgatatgaagggagtggaaggctatggc
agtgaccagacgtatttcgaagaaatcaaacagttttactaccgagatgagttcagccat
caggtgcaggagtggaaccggcagcgcaccatggccatcgagcgagctttacagcaattc
ttgtatgtgcagatggccaaagagctcaagaacaagctgctggctgaagccaaagaatat
gtcataaaggcctgtagtcgaaagctctacaactggttgagggtggcgccctacaggcca
gatcaacaagtagaagaagacgacgactttatggatgagaaccaagggaagggcatccgg
gtcctaggcattgctttctcctctgccagagatcaccctgtgttctgcgccttggtcaat
ggtgaaggagaagtgacagacttcctccggctgcctcattttaccaaacggcgaactgca
tggagagaggaagagcgggagaaaaaggctcaagacattgaaactctgaagaaattcctt
ctgaacaaaaagcctcatgtggtgacagttgcaggagagaacagggatgcccagatgttg
attgaggatgtgaagcgcatcgtgcatgagctggaccagggtcagcagctgtcctctatt
ggggtagagctgattgacaacgagttggccatcctctatatgaacagcaagaaatcagag
gcagagttccgggattaccctcctgtgctgagacaggccgtctccctggcccggcgcatc
caggaccctctgattgagtttgcccaggtgtgcagctcagatgaagacatcctgtgcctc
aagtttcaccccttgcaggagcatgtggtgaaagaagagttactcaatgccctgtactgt
gaattcatcaaccgagtcaatgaggttggagttgatgtcaaccgtgccatagcccacccc
tacagccaggccttgattcagtatgtctgtggcctgggacctcgaaaagggacccatctc
ctgaagattctgaaacagaacaacaccaggctcgagagccggactcagctggtcaccatg
tgccacatgggtcccaaagtcttcatgaattgtgctggcttcctcaagattgacaccgcc
tccctgggggacagcactgactcatatattgaagtccttgatggttcccgagttcaccct
gagacttatgagtgggccaggaagatggcagtggatgctctagaatatgatgaatcagct
gaggatgccaaccctgcaggagcccttgaagaaatcttggaaaacccagagcgactcaag
gacctagaccttgatgcctttgcagaagaactggagaggcagggctatggtgacaaacac
atcacgctgtacgacatccgagcggagctgagctgtcgatataaggacctccggacagcc
taccgctctcccaacacagaggaaatcttcaatatgttaaccaaagaaacaccagagacc
ttctacattggaaagctcattatctgcaacgtcaccggcatcgcccacaggcgtccacag
ggtgagagctacgaccaggcaatccgcaacgatgagacggggctgtggcagtgccctttc
tgtcaacaggacaatttcccggaactaagcgaggtctggaaccactttgacagcggttca
tgcccaggccaggccatcggtgtcaaaacacggctagacaatggtgtcactggcttcatc
cccaccaaattcctcagtgacaaagtggtaaagcggccagaggaacgggtgaaggtggga
atgactgttcattgccgcatcatgaagattgacatcgagaagtttagcgcagacctgacc
tgccgcacctcggacctcatggataggaacaacgagtggaagctgcccaaggacacctac
tatgactttgatgccgaagcagcagaccacaagcaggaggaggacctgaagcggaagcag
caacggaccacatatatcaagcgagtgattgcacacccatccttccataatataaatttt
aagcaagcagaaaaaatgatggaaaccatggaccagggtgacgtgatcatccgaccgagc
agcaagggcgagaatcacctgacagtgacctggaaggtcagtgacggcatctaccaacac
gtggatgtgcgggaagagggcaaggaaaacgccttcagcctgggagccaccctgtggatc
aacagtgaggagtttgaagacttggatgagattgttgcccgctatgttcagcctatggca
tcctttgcccgggaccttctaaaccacaaatattatcaggactgcagcggtggggaccgt
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcattccctat
ttcatctgtgcctgcaaggaactgcccggcaagttcctactgggataccagccccggggt
aaacccaggatagaatatgtaactgtgactccagaaggattccggtaccggggccaagtc
ttccccactgtgaacggccttttcagatggtttaaggatcactatcaggaccccgtacca
ggcatcacccccagtagcagcagcaggacccgaacacctgcttctatcaatgctacccca
gccaacatcaaccttgcagatctgacgcgggctgtgaatgccctgccccagaacatgacc
tcgcagatgttcaatgccattgctgccgtgacaggccagggccagaaccctaacgccacc
ccagcacagtgggcctccagccagtatggctatggcggcagcggagggggcagtagcgct
taccacgtattcccaacaccagcccagcagccagtggccacaccactaatgacccccagc
tactcctacacaacacccagccaacccatcaccacaccacagtaccaccagctgcaggcc
agcaccaccccacagtctgcccaggcccagccccagccctcctccagctcccggcaacgg
cagcagcagccaaagtccaatagccatgcagccatcgactggggcaagatggcggagcag
tggctgcaggagaaggaggcggagcggcggaaacagaagcagcggctgacccctcggccc
tcccccagccctatgatcgaaagcacccccatgtctattgctggcgatgccaccccactc
ctggacgagatggatcggtag
DBGET
integrated database retrieval system
