Cervus canadensis (wapiti): 122448369
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Entry
122448369 CDS
T07554
Name
(RefSeq) transcriptional repressor CTCFL-like
KO
K23195
transcriptional repressor CTCF
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122448369
03036 Chromosome and associated proteins [BR:
ccad03036
]
122448369
Transcription factors [BR:
ccad03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122448369
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122448369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
Zf-C2H2_ZNF451_C
zf-C2H2_REST
zf-C2H2_7th_ZNF462
zf-C2H2_ZN142
zf-C2H2_15
Zn_ribbon_8
zf-C2HE
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
122448369
NCBI-ProteinID:
XP_043335564
LinkDB
All DBs
Position
10:57579946..57603962
Genome browser
AA seq
624 aa
AA seq
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MAGAELSVPPEQFTQIKEPELIPDRALEEEEEEENDGVCRVKEQPDSAGLEVESVQGPLQ
TTILEEVPELVLTAPEESEKHILTLQTVHFPSEEAELQDLSWLDPQQEDEMQEEVYSLQE
MEVMQFQLLEENVTGAGEDYKSAMSLEESTGSIKFQKGQEEEQLLAEGGFSENTEEHFFL
VEARPGDEGRDEIVLTFSNLNMEEQKEKPELDQAHLEKPSTTKNQKKAKEVKQTFHCNLC
KFTSSRISNFNRHVKIHSTEKPHVCHLCLKAFRTVTLLRNHVNTHTGTRPHKCGDCDMAF
VTSGELTRHRRYKHTHEKPFKCSVCKYASVEASKLKRHIRSHTGERPFQCSLCSYASKDT
YKLKRHMRTHSGEKPYECHICHARFTQSGTMKMHIVQKHSENVPKYQCPHCATIIARKSD
LRVHLRNLHTYETVEMKCRYCPSVFHDRYSLIQHQKTHKNEKRFKCDYCSYACKQERHMT
VHIRTHTGEKPFVCLSCNQCFRQQQLLNVHFKKYHDANFVPTVYECPKCGKGFSRWSNMH
RHSEKCNSGQEKPATMEKETTMKKPANPREPAKEDEATAEEVSLVSGELYPEETVPIDFI
EAKTEGEDLEEDLSCDMILALMDK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggctgagctctctgtcccccctgagcagttcacccaaatcaaagaaccagag
ttgataccagacagggccctggaggaggaggaggaagaggaaaatgacggggtgtgccga
gtaaaggaacagcctgactctgcgggtttggaggtggagagtgttcaggggcccctccag
accacgatcctggaggaggtgccagagctggtgctgactgccccggaggagagcgagaag
cacatcctgaccctgcagaccgtgcacttcccctcggaagaggctgaactgcaggacctc
agctggctggatccccagcaggaggacgagatgcaggaggaggtatactcgctgcaggag
atggaggtgatgcagtttcagcttctggaggagaatgtgaccggggccggtgaagactat
aagtctgcaatgagcctggaagaaagcactggatccataaagttccagaaaggtcaggaa
gaggaacagctgctcgctgaaggtggattcagtgaaaatacagaagagcatttttttctt
gtggaagcaaggccaggagatgaaggaagagatgaaatcgttctgacattttcaaactta
aatatggaagaacaaaaagagaaacctgaactggatcaagcacaccttgaaaaacccagc
actacgaaaaatcaaaaaaaggcaaaggaagtaaaacaaaccttccattgcaacttgtgc
aagttcacctcttctagaatttcgaatttcaatcgtcatgtgaaaattcacagcactgaa
aagccccacgtgtgtcacctttgtctgaaagctttccgtacagttaccctccttcggaac
catgtcaatacccatacaggaaccaggccccacaagtgtggtgattgtgacatggcgttt
gtcaccagtggagaactcacccggcacagacgttataaacacactcacgagaagcccttt
aagtgttccgtgtgcaagtatgctagtgtagaagcaagcaagttgaagcgccacatccgc
tcgcacacgggtgagcgcccgtttcagtgctccctctgcagctatgccagcaaggacacc
tacaagctgaagcggcacatgagaacacattcaggtgagaagccctacgaatgccacatc
tgccatgcccgcttcacccagagcgggaccatgaagatgcacatcgtgcagaagcacagt
gagaatgtccccaagtaccagtgcccgcactgcgccaccatcatcgccaggaagagcgac
ctgcgtgtccatttgcgcaacctgcacacatatgagactgtagagatgaagtgccgttac
tgcccttctgtcttccacgatcgctacagtctcatccagcaccagaaaactcacaaaaat
gagaagagattcaagtgtgactactgcagctatgcctgcaagcaggaacgtcatatgaca
gttcacatacgtacccataccggagagaagccatttgtctgtctctcctgcaatcaatgt
ttccgacagcagcagcttctaaatgtgcacttcaagaaataccacgatgccaatttcgtc
ccgactgtttatgaatgccccaagtgtggcaaaggtttttcccgctggagcaacatgcac
agacactcagaaaaatgtaactccgggcaggaaaagccggccaccatggaaaaagaaaca
acaatgaagaagcctgccaacccaagagagccagccaaggaagacgaagccacagccgag
gaggtatccctggtgagtggagagctgtacccagaagagacggtgcccattgacttcata
gaagccaagaccgaaggcgaggacctggaggaagacctgagctgtgacatgatcctagcc
ttgatggataagtga
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