Cervus canadensis (wapiti): 122448411
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Entry
122448411 CDS
T07554
Symbol
SDC4
Name
(RefSeq) syndecan-4
KO
K16338
syndecan 4
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04512
ECM-receptor interaction
ccad04514
Cell adhesion molecules
ccad04820
Cytoskeleton in muscle cells
ccad05205
Proteoglycans in cancer
ccad05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122448411 (SDC4)
04514 Cell adhesion molecules
122448411 (SDC4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122448411 (SDC4)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
122448411 (SDC4)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
122448411 (SDC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccad00535
]
122448411 (SDC4)
Proteoglycans [BR:
ccad00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
122448411 (SDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
122448411
NCBI-ProteinID:
XP_043335628
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Position
10:complement(72166232..72188297)
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AA seq
199 aa
AA seq
DB search
MAPARLLALLLLLVGVPAAAAESIRETEVIDPQDLLEGRYFSGDLPDDEDVGGPGQESDD
FELSGSGDLDDSEDTRIFPEVMHPLVPIDNYIPEKTGSRVPTEPKELEENEVIPKRSSPF
DGDEDVSNKVSMSSTAQGSNIFERTEVLAALIVGGVVGILFAVFLVLLLVYRMKKKDEGS
YDLGKKPIYKKAPTNEFYA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgcccgcctgctcgcgctgctgctgctcctcgtgggcgtccccgccgccgcc
gccgagtcgatccgagaaactgaggtcatcgaccctcaagacctcctagaaggccgatac
ttttccggagacttaccagacgacgaggacgtcggggggcccgggcaggaatccgatgac
tttgagctgtctggctctggagatctagatgactcagaggacacccggatcttcccagaa
gtgatgcaccccttggtccctatagataactacatccctgagaagacagggagccgagtt
cccaccgaacccaaggaactggaggagaatgaagttatccccaagaggtcttcccctttt
gatggggacgaggatgtgtccaacaaggtgtccatgtccagcacagcccagggcagcaac
atctttgagaggacagaggtgctggcagctctgatcgtgggcggtgtcgtgggcatcctc
tttgccgtcttcctcgtcctgctgctcgtgtaccgcatgaagaagaaggatgagggaagc
tacgacctgggcaagaaacccatctacaaaaaagcccccaccaatgagttctacgcctga
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