KEGG   Cervus canadensis (wapiti): 122448411
Entry
122448411         CDS       T07554                                 
Symbol
SDC4
Name
(RefSeq) syndecan-4
  KO
K16338  syndecan 4
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad04512  ECM-receptor interaction
ccad04514  Cell adhesion molecules
ccad04820  Cytoskeleton in muscle cells
ccad05205  Proteoglycans in cancer
ccad05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    122448411 (SDC4)
   04514 Cell adhesion molecules
    122448411 (SDC4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122448411 (SDC4)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    122448411 (SDC4)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    122448411 (SDC4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ccad00535]
    122448411 (SDC4)
Proteoglycans [BR:ccad00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   122448411 (SDC4)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 122448411
NCBI-ProteinID: XP_043335628
LinkDB
Position
10:complement(72166232..72188297)
AA seq 199 aa
MAPARLLALLLLLVGVPAAAAESIRETEVIDPQDLLEGRYFSGDLPDDEDVGGPGQESDD
FELSGSGDLDDSEDTRIFPEVMHPLVPIDNYIPEKTGSRVPTEPKELEENEVIPKRSSPF
DGDEDVSNKVSMSSTAQGSNIFERTEVLAALIVGGVVGILFAVFLVLLLVYRMKKKDEGS
YDLGKKPIYKKAPTNEFYA
NT seq 600 nt   +upstreamnt  +downstreamnt
atggcccccgcccgcctgctcgcgctgctgctgctcctcgtgggcgtccccgccgccgcc
gccgagtcgatccgagaaactgaggtcatcgaccctcaagacctcctagaaggccgatac
ttttccggagacttaccagacgacgaggacgtcggggggcccgggcaggaatccgatgac
tttgagctgtctggctctggagatctagatgactcagaggacacccggatcttcccagaa
gtgatgcaccccttggtccctatagataactacatccctgagaagacagggagccgagtt
cccaccgaacccaaggaactggaggagaatgaagttatccccaagaggtcttcccctttt
gatggggacgaggatgtgtccaacaaggtgtccatgtccagcacagcccagggcagcaac
atctttgagaggacagaggtgctggcagctctgatcgtgggcggtgtcgtgggcatcctc
tttgccgtcttcctcgtcctgctgctcgtgtaccgcatgaagaagaaggatgagggaagc
tacgacctgggcaagaaacccatctacaaaaaagcccccaccaatgagttctacgcctga

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