Cervus canadensis (wapiti): 122448873
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Entry
122448873 CDS
T07554
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03082
ATP-dependent chromatin remodeling
ccad05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122448873 (SS18L1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
122448873 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccad03036
]
122448873 (SS18L1)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122448873 (SS18L1)
GBAF(ncBAF) complex
122448873 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
122448873
NCBI-ProteinID:
XP_043336476
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All DBs
Position
10:complement(53993627..54022124)
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AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQSMTLGPGGLSQSGSAQGLHSQGSLSDAIGAGLPPSSLMQ
AQIGNGPNHVSLQQTAQSTLPTTSMSMSGSGHGSGPGYSHSGPASQSVPLQSQGAISNYV
SRANISMQSNPVSMMHQQAASSHYSAAQGGSQHYQGQSMAMMGQSGQGGGVMGQRPMAPY
RPSQQGSSQQYLGQEEYYGGEQYGHGQAASEPMSQQYYPDGHGDYAYQPASYTEQTYDRS
FEDSTQHYYEGGNSQYSQQQTGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQGAPSQ
YSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggctttcgcgtccgcccggcctagaggcaaaggcgaggtcacgcagcaaacc
atccagaagatgctggatgagaaccaccacctgatccagtgcatcctggactatcagagc
aagggcaagacggctgagtgcacccaataccagcagatcctacaccggaacctggtctac
ctggccacgatcgcagactccaaccagaacatgcagtccttgctgcccgccccgccaacg
cagagcatgacgctgggcccgggagggctgtcccagagcggctcggcccagggcctgcac
tcgcagggtagcctcagcgatgccatcggggccggcctgccaccgtcctccctcatgcag
gcccagatcggcaacggtccgaaccacgtgtccctgcagcagacggcgcagagcacgctg
cccaccacctctatgagtatgtcgggcagcggccacggctcagggcccggctacagccac
tcaggccctgcctcgcagagtgtacccctgcagagccagggcgccatcagcaactatgtg
tcccgggccaacatcagcatgcagtccaacccagtgtccatgatgcaccagcaggcagcc
tcgtctcactacagcgcggcacagggcgggagccagcactaccagggccagtccatggcc
atgatgggccagagcgggcaggggggcggcgtgatggggcagcggcccatggcgccctac
cggccctcccagcaaggctcgtcccagcagtacctgggccaggaggagtactacggcggt
gagcagtacggccacggccaggccgcttcggagcccatgagccagcagtactaccccgat
ggacacggcgactatgcctaccagccagcgtcctacacagagcagacctatgaccggtcg
tttgaggactccacgcagcactactacgagggcggaaactcacagtacagccagcagcag
acagggtaccagcagggcacggcccagcagcagacgtactcccaacagcagtaccccaac
cagcagagctaccccggacaacagcaaggctacgggcccgcccagggcgccccctcacag
tactccagctaccagcagggacaaggccagcagtacggaagctaccgagcatctcagaca
ggcccgtccgcccagcagcagcggccttatggctacgagcagggccagtacggaaattac
cagcagtga
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integrated database retrieval system
