Cervus canadensis (wapiti): 122448914
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Entry
122448914 CDS
T07554
Name
(RefSeq) transcriptional repressor CTCFL-like
KO
K23195
transcriptional repressor CTCF
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122448914
03036 Chromosome and associated proteins [BR:
ccad03036
]
122448914
Transcription factors [BR:
ccad03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122448914
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122448914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_ZN142
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
122448914
NCBI-ProteinID:
XP_043336505
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All DBs
Position
10:57556279..57579635
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AA seq
491 aa
AA seq
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MAGAELSVPPEQFTQIKEPELIPDRALEEEEEEENDGVCRVKEQPDSAGLEVESVQGPLQ
TTILEEVPELVLTAPEESEKHILTLQTVHFPSEEAELQDLSWLDPQQEDEMQVMVHQADS
GVQSLVWFGEVAQQSLHQCVLNVQEEVYSLQEMEVMQFQLLEENVTGAGEDYKSAMSLEE
STGSIKFQKGQEEEQLLAEGGFSENTEEHFFLVEARPGDEGRDEIVLTFSNLNMEEQKEK
PELDQAHLEKPSTTKNQKKAKEVKQTFHCNLCKFTSSRISNFNRHVKIHSTEKPHVCHLC
LKAFRTVTLLRNHVNTHTGTRPHKCGDCDMAFVTSGELTRHRRYKHTHEKPFKCSVCKYA
SVEPPLQVALIPPPSPNVVSAPPAVGRQQQAVACKHAARGEFQWAWWAAPPDHVSWVRIL
AAGARLQPPLEEELLRVGAGVGVGRMAGKVPGSCTREVGAGPSHGGAKLGEVVQEGKDAP
GLEGACGEPEA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggctgagctctctgtcccccctgagcagttcacccaaatcaaagaaccagag
ttgataccagacagggccctggaggaggaggaggaagaggaaaatgacggggtgtgccga
gtaaaggaacagcctgactctgcgggtttggaggtggagagtgttcaggggcccctccag
accacgatcctggaggaggtgccagagctggtgctgactgccccggaggagagcgagaag
cacatcctgaccctgcagaccgtgcacttcccctcggaagaggctgaactgcaggacctc
agctggctggatccccagcaggaggacgagatgcaggtgatggtgcaccaggctgatagt
ggggtgcagtcgctggtgtggttcggggaggtggcccagcagagcctgcaccagtgtgtc
ctcaatgtccaggaggaggtatactcgctgcaggagatggaggtgatgcagtttcagctt
ctggaggagaatgtgaccggggccggtgaagactataagtctgcaatgagcctggaagaa
agcactggatccataaagttccagaaaggtcaggaagaggaacagctgctcgctgaaggt
ggattcagtgaaaatacagaagagcatttttttcttgtggaagcaaggccaggagatgaa
ggaagagatgaaatcgttctgacattttcaaacttaaatatggaagaacaaaaagagaaa
cctgaactggatcaagcacaccttgaaaaacccagcactacgaaaaatcaaaaaaaggca
aaggaagtaaaacaaaccttccattgcaacttgtgcaagttcacctcttctagaatttcg
aatttcaatcgtcatgtgaaaattcacagcactgaaaagccccacgtgtgtcacctttgt
ctgaaagctttccgtacagttaccctccttcggaaccatgtcaatacacatacaggaacc
aggccccacaagtgtggtgattgtgacatggcgtttgtcaccagtggagaactcacccgg
cacagacgttataaacacactcacgagaagccctttaagtgttccgtgtgcaagtatgct
agtgtagaaccgcccctgcaggtcgccctcatcccccctccatcccccaacgtggtctca
gcgccccctgcagtcggcaggcagcagcaggcagtggcctgcaagcatgcggcacgaggc
gaattccagtgggcttggtgggctgcacctccagaccacgtttcttgggtgaggatcctc
gccgcgggggccagactccagcctcctctggaggaggagctgctccgcgtgggcgcggga
gtgggagtggggaggatggcgggaaaggttccggggagctgcaccagagaggtgggggcg
gggcccagccatggaggggccaagctgggagaggtggtccaggaagggaaagatgcccca
ggcctggagggggcatgtggtgagcctgaggcctga
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