Cervus canadensis (wapiti): 122448964
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Entry
122448964 CDS
T07554
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccad03041
]
122448964 (RBM39)
Spliceosome [BR:
ccad03041
]
Common components
Common spliceosomal components
General mRNP proteins
122448964 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
IHO1
Motif
Other DBs
NCBI-GeneID:
122448964
NCBI-ProteinID:
XP_043336550
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All DBs
Position
10:complement(63737644..63764050)
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AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacgaaaaagaagcaaaagtaaggaacggaagcgaagtagagat
agagaaaggaaaaagagcaaaagccgtgaaaggaagcgaagtagaagcaaagaaaggaga
cggagccgttcaagaagtcgagatcgcagattcagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgttctcgaagcaaaagtccattcagaaaagacaagagccctgtgagggaa
cctattgataatctcactcctgaggaaagagatgcaaggactgttttctgcatgcagctg
gcagcaagaattcggccaagggatttggaagagtttttctctacagttggaaaggttcgt
gatgtgaggatgatttctgacagaaattcaagacgttccaaaggaattgcttatgtggag
tttgttgatgttagctcagtgcctctagcaataggattaactggtcagcgggttttagga
gtgccgatcatagtacaagcatcacaggcagagaaaaacagagctgcagcaatggcaaac
aatctacaaaagggaagtgctggacctatgaggctttatgtgggctcgttacactttaac
atcactgaagatatgcttcgagggatttttgagccatttggaaggattgaaagtatccag
ctcatgatggatagtgaaacaggtcgatccaagggatatggatttattacgttttctgat
tcagaatgtgccaagaaagctttggaacaacttaatggatttgagctagcgggaaggccc
atgaaagttggtcatgttactgaacgtactgatgcttccagtgctagctcatttttggac
agtgatgaactggaaaggactggaattgacttgggaacaactggtcgtctccagttaatg
gcaagacttgcagagggtacaggtttgcagatcccgccagcagcacagcaagctttgcaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttcccaacagactgaagcttcagcgttagctgcagctgcctctgttcaacct
ctggcaacacagtgtttccaactctctaacatgtttaatcctcaaacagaagaagaagtt
ggatgggatacagagattaaagacgatgtgattgaagaatgtaacaaacatggaggagtt
attcatatttatgttgacaaaaattcagctcagggcaatgtgtatgtgaagtgcccatcg
attgctgcagccattgctgctgtcaatgcgttgcatggcaggtggtttgcgggtaaaatg
ataacagcagcatatgtacctcttccaacttatcacaacctcttccctgactctatgaca
gcaacacaactactggttccaagtagacgatga
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