Cervus canadensis (wapiti): 122449219
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Entry
122449219 CDS
T07554
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122449219 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122449219 (CSTF3)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
122449219 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
122449219
NCBI-ProteinID:
XP_043336696
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All DBs
Position
11:complement(58419267..58483285)
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AA seq
717 aa
AA seq
DB search
MSGDGATEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNTVEEAVRIIT
GGAPELAVEGNGPVESNAVLTKAVKRPNEDSDEDEEKGAVVPPVHDIYRARQQKRIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagacggagccacggagcaggcagctgagtatgtcccagagaaggtgaagaaa
gccgaaaagaaattagaagagaatccttatgaccttgacgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacttatgaacgccttgttgcccag
ttccccagttctggcagattctggaaactgtacattgaagcagagattaaagctaaaaat
tatgacaaggtagaaaagctatttcagagatgccttatgaaggttttgcacattgattta
tggaagtgttatctttcgtatgtccgagaaaccaagggtaaactaccaagttacaaagaa
aagatggctcaagcatatgactttgcactggataaaattggaatggaaattatgtcttac
cagatttgggtggattacatcaacttcttaaaaggcgtggaagctgttggatcttatgca
gaaaatcagagaataacagctgttcgaagagtttatcaacgaggttgtgttaatccaatg
atcaatattgaacaattgtggagagactataacaaatatgaagagggtatcaatattcat
ttagctaaaaagatgattgaagatcggagtagagattacatgaatgctaggcgggtagca
aaggaatatgagacagtaatgaaaggtttggaccgcaatgctccttcagtgcctcctcag
aatactcctcaagaagctcagcaggtggatatgtggaagaagtacatacagtgggaaaag
agcaaccctcttcgtacagaagatcagaccctgataactaaaagagttatgtttgcttat
gaacagtgcctgctggtgctgggccatcaccctgatatttggtatgaagctgcccaatat
cttgagcaatctagtaaactgttagcagagaagggggatatgaataatgccaaattattt
agtgatgaagctgctaatatatatgaaagagccataagcactttattaaagaagaatatg
cttctttattttgcatatgcagattatgaagagagtcgcatgaagtatgagaaagttcac
agtatatataatagacttctggcaattgaggatattgatcccaccttggtatatatccaa
tatatgaaatttgcaagaagagctgaaggtatcaaatctggaagaatgatatttaaaaaa
gcaagagaagataccagaacccgccaccatgtctatgttactgcagcactcatggaatat
tactgtagtaaggacaaatctgttgcctttaagatttttgagctggggctaaagaaatat
ggagacattccagagtatgtcctggcctatattgactatctttctcacctcaatgaggac
aataatactcgagttttgtttgaacgagttttaacatctggaagtcttcctcctgagaaa
tctggagaaatctgggcccgatttctagcttttgaaagtaatattggtgatctagctagt
atactcaaagtagagaaaagacggtttacagcattcaaagaagagtatgaaggcaaagaa
acagctttactggtagacagatacaagttcatggatttatatccttgctctgcaagtgaa
ctaaaagcacttgggtataaggatgtctcccgtgctaagctagcagctataattccagac
ccagttgtagctccttctatagtgcctgttctgaaagatgaagtggatagaaaaccagaa
taccctaagccagacactcagcagatgattccatttcagccacgacatttagcacctccg
ggcttacaccctgtccctggtggagtgttcccagtaccacctgcagcagtggttttaatg
aaacttctccctcctcctatttgtttccagggtccttttgtacaagtggatgaactgatg
gaaattttccgaagatgcaagataccaaatacagttgaagaagctgtgaggatcattact
ggaggagccccagagctggctgtagaaggcaatggcccagtggaaagtaatgcagtgctc
acgaaggccgtcaaaaggcccaacgaggattccgatgaagatgaggaaaagggagctgtg
gtcccccctgttcatgacatctacagagcaaggcagcagaagcggattcggtga
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