Cervus canadensis (wapiti): 122449418
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Entry
122449418 CDS
T07554
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03013
Nucleocytoplasmic transport
ccad05014
Amyotrophic lateral sclerosis
ccad05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122449418 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
122449418 (NUP98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122449418 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122449418 (NUP98)
03036 Chromosome and associated proteins [BR:
ccad03036
]
122449418 (NUP98)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122449418 (NUP98)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122449418 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
ANAPC3
Motif
Other DBs
NCBI-GeneID:
122449418
NCBI-ProteinID:
XP_043336866
LinkDB
All DBs
Position
11:46553481..46643899
Genome browser
AA seq
1816 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTNSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTAGLFGSSPATSSATGL
FSSSTTNSGFAYGQNKTAFGTSTTGFGTNPGGLFGQQNQTTSLFSKPFAQPTTTQTTGFS
FGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGASLFGQTNTGFGAVG
STLFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNTSGNSIFG
SKPGPGTLGTGLGAGFGTALGAGQASLFGNSQPKLGGSLGTGAFGAPGFNTTTATLGFGA
PQAPVALTDPNASAAQQAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQ
KALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLVNGAFMPKKSIKKLV
LKNLNNSSLFSPVNRESEDLASPSDYPENGERFSFLSKPVDENHQQDGEDDSLVSRFYTN
PIAKPIPQTPESAGNKHNSSNSVDDTIVALNMRAALRNGLEGSSEETSFHEESLQDDREE
IENNTYHIHPAGIILTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDV
NLTNLNLDDIVHIRRKEVIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPD
RLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEERPSKTST
KKLKTAPLPPAGQATPFQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVLDS
MLEESVPEDQEPVSASTHIASSLGINPHVLQIMKASLLADDEDVDTVLDHRITRLPSKAD
TSQEICSPRLPISATHSSKPRSLVSGLLQSKFTSGTFLSPSASLQECRTPRTSSLMNIPS
TSPWSVPPPLTSVFTVPSPAPEFQLKTVGTRRQPGLVPLEKSVTYGKGKLLMDMALFMGR
SFRVGWGPNWTLANSGEQLSGSLELENHQIADCMEYGFLPNPVAVKSLTESPFKVHLEKL
SLRQKKLDKDLQLYQTSLELKLKHSTVHVDELCPLIVPNPGVAVIHDYADWIKEASGDLL
EPQIVKHWSLTWTLCEALWGHLKELDSQLDEPSEYIQILERRRAFSRWLSNTASPQIEEE
VSLTQKDNPMEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQLVGSQSVRELLTMQLVD
WHQLQADCFIQEERLRIFALLAGKPVWQLSEQKQINVCSQLDWKRSLAVHLWYLLPPTAS
ISKALSMYEEAFQNTSEGDRYARCPLPSYLEGSGYVVEEEQDSQRPLQDVCFHLLKLYSD
RHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLESEGL
WEWAIFVLLHIDNSSTREKAVRELLTRHCQLLETPESWAKETFLTEKLCVPAEWIHEAKA
VRAHVESDKHLEALYLFKAGHWNRCHKLVIRHLASDAIINENYDYLKGFLEDLAPLERSG
LIQDWETSGLVYLDYIRVIEMLRHIQQVDCSGYELEQLHTKVTSLCNRIEQIQCYNAKDR
LAQSDMAKRVANLLRVVLSLQHAPDATSDSTPDPQRVPLRLLAPHIGRLPMPEDYALEEL
RSLTQSYLRELTVGSQ
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagtcatttggaacaccctttgggggtggcactggtggctttggcacaact
tcaacatttgggcagaatactggatttggcactactagtggaggggcgtttggaacatct
gcatttggttctagcaacaatactggaggcctgtttggaaattcacagaccaaaccagga
ggcttatttggtaccaattcatttagccagccagctacctccacaagcactggctttggg
tttggcacatcaacaggaacatcaaatagcttgtttggaactgcaagcacaggaaccagc
ctcttctcatcccagaacaatgcctttgcacaaaataagccaaccggctttgggaatttt
ggaacaagtaccagcagtgggggactttttggaactacaaataccacctctaatcctttt
ggtagcacatctggctctctctttgggccaagtagttttacagctgctcctactgggact
actattaagtttaaccctccaactggtactgatactatggttaaagctggagtgagcact
aacatcagtaccaagcaccagtgtattactgctatgaaagaatatgaaagcaagtcacta
gaggagcttcgtttagaggattatcaggccaaccggaaaggcccacagaaccaggtggga
gcaggtaccacagctggcttgtttgggtcttctccagccacctccagtgcgacaggactc
ttcagctcttccacaacgaattcaggctttgcttacggtcagaacaaaacagcctttgga
actagtacaactggatttggaacaaatcctggtggtctctttggccagcagaatcaaact
accagcctcttcagcaaaccatttgcccagcccacaaccacccagaccactggtttttcc
tttggtaataccagcacactaggacagccaagcaccaacaccatgggtctatttggagta
acccaagcctcacagccaggaggtctttttgggacagctacaaacaccagcactgggaca
gcatttggaacaggagctagtctctttgggcagaccaatactggatttggtgctgttggt
tcgaccctgtttggaaataacaagcttactacgtttggaaccagcacaaccagtgctcct
tcatttggtacaacgagtggcgggctctttggtaacaaaccaaccctgactttaggaacc
aatacaaacacttccaattttggattcggcacgaataccagtgggaatagtatttttgga
agtaaaccaggacctggcactctgggaacggggcttggtgcaggatttggaacagctctt
ggtgctggacaggcatctttgtttgggaacagccaacctaagctcggagggtcccttggt
acaggagcctttggggcccctggatttaatacaacgacagctactttgggctttggagcc
ccccaggccccagtagctttgacagatccaaatgcttctgctgcccagcaggctgttctc
caacagcacatcaatagtctgacatactcacctttcggagactctcctctcttccggaat
cccatgtcagaccctaagaagaaagaagagagattgaaaccaacaaatccagcagcccaa
aaggctcttactacacctactcattataaactgacaccccgccctgccaccagagtccga
ccaaaggctttacaaacaacaggcacagccaagtcacatctttttgatggactggatgac
gatgaaccatccttagtcaatggagcgttcatgcccaagaagagcattaagaagttggtt
ttgaaaaaccttaacaatagcagtctattctctcctgttaatcgtgagtcagaagatcta
gcttcaccatctgattatccagaaaatggagagagattcagttttctgagcaaaccagtg
gatgagaatcatcagcaggatggagaagatgattctcttgtgtcacgtttttatactaac
cctattgccaaacccattcctcaaaccccagaaagtgctggaaataaacataacagcagc
aacagtgtagatgataccatcgttgcattaaacatgcgtgctgccttgcgaaatggactg
gaaggaagcagtgaagagacctcttttcatgaggagtcactgcaggatgaccgagaagaa
atcgaaaataatacttaccatatacatccggcaggcatcattctcactaaggttggctac
tatactattccatccatggatgaccttgctaaaattaccaatgaaaaaggagagtgcatt
gtctctgacttcactattggtcgtaaaggttatggttcgatctattttgaaggagatgtg
aatttgacaaatctaaatttagatgacattgtacatatccgaaggaaagaagtgattgtc
tacttagatgataaccaaaaaccacctgtgggtgaaggactaaatagaaaggctgaagtt
acattggatggagtttggccaacagataaaacatctcgctgtttaataaagagcccagat
cgacttgctgatatcaactacgagggaagattggaagcagtttcaaggaaacagggagct
cagttcaaagagtaccgtcctgaaacgggttcttgggtgtttaaggtctctcatttttct
aagtatggccttcaggattctgatgaagaggaggaggaacggccttccaaaactagtaca
aagaagttgaagactgcccctttacctcctgcaggccaggctacaccattccagatggct
cttaatggcaaaccagcacctccaccccagagccagagcccagaggtggagcagttaggg
agggttgtggaactggacagtgacatggtagatatcacccaggagccagttttggattcc
atgttagaagagagcgtgcctgaggatcaggaacccgtgtccgcctcaacacacattgca
tcttcactgggaattaatccacatgtgttacagatcatgaaagcatcattgcttgctgat
gatgaagatgtagatacggtcctggatcaccgcatcactcgccttccttccaaagcagat
acttctcaagaaatatgttctcccaggctccccatctcggcaactcactcatcaaaacct
cgttcattagtaagtgggttactacaatcaaaatttacaagtggaacctttctttcacca
agtgcctctttacaagaatgtcgtactcccagaacatcatcgttgatgaatatcccatcc
acatccccttggtctgtccctccacccctgacttctgtatttacggtgcccagcccagcc
cctgaatttcagttgaaaacagtgggtacacgcagacaaccaggcctagtccctcttgaa
aagtctgtcacctatggaaaggggaagctcctgatggacatggccctatttatgggacga
tcatttcgggttggttggggccccaactggacgcttgctaatagtggagaacagctaagt
ggttctctggaactggaaaatcatcagattgctgactgtatggaatacggattcctgcct
aatccagtagctgttaaatccctaactgagtctccattcaaagttcatttggaaaaactt
agtttgaggcaaaagaagctggacaaagacctacaattataccagacatctctggagctt
aaattaaaacatagcaccgttcacgtggatgagctgtgtcctcttattgtccccaatccg
ggagttgctgtcattcatgactatgcagattggattaaggaagcatcgggagatttattg
gaaccacaaattgtgaagcactggagcctaacatggacgttatgcgaagctctgtggggc
cacctgaaggagcttgatagccagctggatgagcccagtgaatacattcagattctggag
cgaaggagagctttttctcgctggctgtccaatactgcctcacctcaaattgaggaagaa
gtctcattgacccaaaaagacaaccctatggaggctgtcttcagctacctcacgggcaag
aggatcagtgaggcctgctccctggcccagcagtcaggtgatcatcgtcttgctcttctt
ttatcccagttggttggcagccaatcagtccgtgagctgcttactatgcagctggtggat
tggcatcaactccaggctgactgcttcatccaggaggagagactgcgcatctttgccctt
ttggctggaaaaccggtatggcagctctcagagcagaagcaaatcaatgtgtgctcccag
ttggattggaaacgctccctcgctgtccatctttggtatttgcttccaccaacagcttcc
atttccaaggcgctcagcatgtatgaagaagcatttcagaatacctctgagggtgacaga
tacgcccgctgtccacttccctcatacctggagggctctggatatgtggtagaggaggaa
caagactcacagagacctcttcaagatgtctgctttcatcttctaaaactctacagtgac
agacattatgacctcaaccagctgctggagcctcgaagcataactgcagatcctttggac
tatcgcctaagctggcacttgtgggaggtgctacgggctcttaactatacccatctgtca
gagcagtgtgagggtgtgctgcaggccagttatgctggccaactggagagtgagggcctt
tgggagtgggccatctttgtcctcctgcacattgacaactcaagcacgcgggagaaggct
gttcgagaactgcttacccggcactgccagctattggagacccctgaatcttgggctaag
gagaccttcctgaccgagaagctttgtgtgcccgctgaatggattcatgaggccaaagca
gtgcgagcacacgtggaatccgacaagcacctggaggccctctatttatttaaagcagga
cactggaacaggtgccataaactcgtcatccggcacttagcttccgatgccattattaat
gagaactatgactacctgaaggggttcttggaagacctggcacctctggagcgcagtggc
ctaatccaggactgggaaacatccgggcttgtttacctggactacattcgggtcattgaa
atgctccgtcatatacagcaggtggattgctcaggttatgaactcgagcagttgcacacc
aaagtgacctcactgtgcaacaggatagagcaaatccagtgttacaacgccaaggaccgc
ctggctcagtcagacatggccaagcgtgtagccaacctgctgcgggtggtactgagcctt
cagcatgcccctgatgcaacctccgactcaacgccagaccctcagcgagtccctctgcgc
ctgttggctccccacattggccgactccccatgcctgaggactatgccttggaggagctg
cgcagcctcacacagtcctacctgcgggaactgactgtcgggagccagtga
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integrated database retrieval system
