Cervus canadensis (wapiti): 122449605
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Entry
122449605 CDS
T07554
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122449605 (SOX6)
Transcription factors [BR:
ccad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122449605 (SOX6)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
122449605
NCBI-ProteinID:
XP_043337329
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All DBs
Position
11:32658423..33331108
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AA seq
869 aa
AA seq
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MPSSSEVLADVVRESRIEEWKSSHFIRMSSKQATSPFACTADGEEAMTQDLTSREKEEGS
DQHVASHLPLHPIMHNKPHSEELPTLVNTIQQDADWDSVLSSQQRMESENNKLCSLYSFR
NTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCM
EKLLSKDWKEKMERLNTSELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQK
KLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFP
HDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHP
QINPRLKGLSDRLGRSLDTFEHGGGHSYNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPN
AAGAVSPTGIKNEKRGTSPVTQVKDEAAAQPLNLSSRPKTVEPVKSPTSPTQSLFPASKT
SPVNLPNKSSIPSPIGGSLGRGSSLGKWKGQHQEETYELDILSSLNSPALFGDQDTVMKA
IQEARKMREQIQREQQQQQPHGVDGKLSTLNNMGLNNCRNEKERTRFENLGPQLTGKSSE
DGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYRDARGRASSEP
HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSK
IHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGT
GVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGNEMINGED
EMEMYDDYEDDPKSDYSSENEAPEAVSAN
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgagttctgaagttctggctgatgtggtaagagaaagccgaattgaagagtgg
aagagcagccacttcataagaatgtcttccaagcaagccacctctccatttgcctgtaca
gctgatggagaggaagcaatgacccaagatttgacctcaagggaaaaggaagagggcagt
gatcaacatgtggcctcccatctgcctctgcaccccataatgcacaacaaacctcactct
gaggagctaccaacacttgtcaataccattcaacaggatgctgactgggacagtgttctg
tcgtctcagcaaagaatggagtcagagaataataagttatgttccctatattccttccga
aatacctctacctcaccacataagcctgacgaagggagtcgggaccgcgagataatgacc
agtgttacttttggaaccccagaacgccgcaaagggagccttgccgatgtggtggacaca
ctgaaacagaagaagcttgaggaaatgactcggactgaacaagaggattcctcctgcatg
gaaaaactactttcaaaagattggaaggaaaaaatggaaaggttaaataccagtgaactt
ctcggagaaattaaaggtacacctgagagcctggcagaaaaggaacggcagctctccacc
atgattacccagctgatcagcttacgggagcagctcctggcagcgcatgatgaacagaag
aaactggcagcctcacaaattgagaaacaacggcagcaaatggaccttgctcgccaacag
caagaacagattgcaagacaacagcagcaacttctgcaacagcagcacaaaattaatctt
ctgcaacaacagatccaggttcagggtcacatgcctccgctcatgatcccaatttttcca
catgaccagcggaccctggcagcagctgctgctgcccaacagggattcctcttcccccct
ggaataacatacaaaccaggtgataactaccctgtgcagttcattccatcaacaatggca
gctgctgctgcttctggactcagccctttacagctccagaaaggtcatgtctcccaccca
caaattaacccaaggctaaagggcctaagtgatcgtttgggcaggagtttggacaccttt
gaacatggtggtggccactcttacaaccacaaacagattgagcagctctatgccgctcag
ctggccagcatgcaggtgtcacctggagcaaagatgccatcaactccacagccaccaaac
gcagcaggggcagtctcacctactgggataaaaaatgaaaagagagggaccagccctgta
actcaagttaaggatgaagcagcagcacagccgctgaatctctcatcccgacccaagaca
gttgagcctgtaaagtccccaacatctcccacccagagcctcttcccagccagcaaaacc
agccctgtcaatctgcctaacaaaagcagcatccccagccccattggaggaagtttggga
agaggatcctctttaggtaaatggaaaggtcaacaccaggaagagacttatgaattagat
atcctgtccagtctcaactctcctgccctgtttggggatcaggatacagtgatgaaagct
attcaggaggctcggaagatgcgagaacagatccagcgggagcaacaacagcaacagcca
catggtgttgatgggaaactgtccaccctgaataatatggggctgaacaactgtaggaat
gaaaaggaaagaacgcgctttgaaaatttggggccccagttaacaggaaagtcaagtgaa
gatggaaagctgggcccaggtgtcatcgatcttacccggccagaagatgcagagggaagt
aaagcaatgaatggctctgcagctaaactacagcagtattattgttggccaacaggaggc
gccactgtggctgaggcacgcgtctacagggatgcccgaggccgggccagcagcgagcca
cacatcaagcggccaatgaatgcgttcatggtttgggcaaaggatgagaggaggaaaatc
cttcaggcctttcctgacatgcataactccaacattagcaaaatcttagggtctcgttgg
aaatccatgtccaaccaagaaaagcaaccttattatgaggagcaggcccggctaagcaag
atccacttagagaagtacccaaactataaatacaaacctcgaccgaaacgcacctgcatt
gtcgatggcaagaagctccggattggggaatacaagcaactgatgaggtctcggagacag
gagatgaggcagttctttactgtggggcagcagcctcagattccaatcaccacaggaaca
ggtgttgtgtatcctggtgctatcactatggcaactaccacaccatcacctcagatgaca
tctgactgctctagcacctcggccagcccagagcccagcctcccggtcatccagagcact
tatggtatgaagacagacggcggaagcctggctggaaacgaaatgattaatggagaagat
gaaatggaaatgtatgacgactatgaagatgaccccaaatcagactatagcagtgaaaat
gaagccccggaagctgtcagtgccaactga
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