Cervus canadensis (wapiti): 122449629
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Entry
122449629 CDS
T07554
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04136
Autophagy - other
ccad04140
Autophagy - animal
ccad04211
Longevity regulating pathway
ccad05010
Alzheimer disease
ccad05014
Amyotrophic lateral sclerosis
ccad05016
Huntington disease
ccad05017
Spinocerebellar ataxia
ccad05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122449629 (ATG13)
04136 Autophagy - other
122449629 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
122449629 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
122449629 (ATG13)
05014 Amyotrophic lateral sclerosis
122449629 (ATG13)
05016 Huntington disease
122449629 (ATG13)
05017 Spinocerebellar ataxia
122449629 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
122449629 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122449629 (ATG13)
03029 Mitochondrial biogenesis [BR:
ccad03029
]
122449629 (ATG13)
Membrane trafficking [BR:
ccad04131
]
Autophagy
Autophagosome formation proteins
ULK complex
122449629 (ATG13)
Atg1 complex
122449629 (ATG13)
Mitochondrial biogenesis [BR:
ccad03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122449629 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
122449629
NCBI-ProteinID:
XP_043337397
LinkDB
All DBs
Position
11:70630389..70676459
Genome browser
AA seq
550 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYAVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGDVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRHFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
AYPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPTPVVTDTLRVPTAGLAFSHQLSSS
RLSYQPAALGVGSADLAYPVVFAAGLNATHPHQLMVPGKEGGVPLGPNQPAHGAQADQER
LATYTPSDGAHCAATPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTL
TSLDIPFAMFAPKNLELEDADPMVNPPDSPETTSPLQGSLHSDGSSGGSSGHTQDDFVMI
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAAHEKNVR
EFDAFVETLQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatcttaattcccaggacagaaaggacctggacaagttcattaagtttttt
gccctcaagactgtccaagtgattgtccaggctcgactgggagagaagatctgcactcgc
tcatcttcttccccgacgggctcagactggttcaatttagcgatcaaagacatcccagag
gttacacatgaggcaaagaaggccctggcagggcagctgcctgctgttgggaggtccatg
tgtgtggagatctcactcaagacttccgagggagattccatggagctagaaatctggtgt
ctggaaatgaatgaaaagtgtgataaggaaatcaaagtttcctatgccgtgtacaacaga
ttgtcattgctgctgaagtctctgcttgctataactagggtgactccagcgtaccgactc
tccagaaagcaagggcatgaatatgtcatcttatacaggatatattttggggacgtccag
ctgaatggcttaggggaaggttttcagacagttcgtgttgggacagtgggtacccccgtg
ggcaccatcactctttcctgtgcttacagaattaacttggcattcatgtccaccaggcac
tttgagaggaccccacctatcatgggcattattattgatcactttgtggaccgtccctat
cccagctcctcgcccatgcacccctgcaattacagaactgccggtgaggacactggagta
gcatatccttctgtggaagattctcaagaagtgtgcaccacctccttttccacctcgcct
ccctcccagtgtgtgtttactgtcacaaaggcacattttcagacccctactcctgtggtg
acggacactctgagggtccccacggcaggactggccttttcccatcaactatccagctct
cgcctttcctatcagcctgctgccctgggcgttggatctgctgacctggcttatccagta
gtgtttgctgctggcttaaatgccacacaccctcaccagctaatggtccccgggaaggaa
ggtggggtaccccttggtcccaaccagcctgcccacggtgcccaggctgaccaggagaga
ctggcaacctacaccccttctgatggggcccactgcgccgccacgccatccagcagcgag
gacactgaaactgtatcaaacagcagcgagggacgggcctccccccatgacgtcttggag
accatctttgtccggaaagtgggggcttttgtcaacaagcccatcaaccaggtgactctg
accagtttggacataccttttgccatgtttgctcccaagaacctggagctggaggatgcg
gatcccatggtgaatccgccagattccccagagactacgtctcctctccagggcagcctg
cactctgacggctccagcgggggcagcagcggccatacccaggacgacttcgtcatgatt
gacttcaaaccagctttttctaaagatgacattcttccgatggacctggggaccttctat
cgtgaatttcagaacccccctcagctgagcagcctctccatcgatatcggggcccagtcc
atggccgaggacttggactcactaccagagaagctggctgcgcacgagaagaatgtccga
gaatttgatgcctttgtagaaaccctgcagtaa
DBGET
integrated database retrieval system
