Cervus canadensis (wapiti): 122449650
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Entry
122449650 CDS
T07554
Symbol
NUP160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03013
Nucleocytoplasmic transport
ccad05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122449650 (NUP160)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122449650 (NUP160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122449650 (NUP160)
03036 Chromosome and associated proteins [BR:
ccad03036
]
122449650 (NUP160)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122449650 (NUP160)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122449650 (NUP160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Nup160_C
TPR_NUP160_120_M
Beta-prop_Nup120_160
NUP160_helical
HEAT_Nup120
TTC22_C
Motif
Other DBs
NCBI-GeneID:
122449650
NCBI-ProteinID:
XP_043337437
LinkDB
All DBs
Position
11:complement(71556258..71599339)
Genome browser
AA seq
1402 aa
AA seq
DB search
MAAAGAVERSFVELSGAERERPRHFREFTVCGIGTANAAAGAVKYGESAGGFYYVESGKL
FSVTRNRFIHWKISGDTLELVEESLDINLLNNAVRLKFQNCVLLPGGVHVSETQNHVIIL
ILTNQTVHRLLLPHPSRMYRSELAIESQMQSIFTDIGKVDFRDPCNYQLIPAVPGLSPSS
ATSAAWLSNDGGALFALPSASGGIFVLKLPPYDIPGVVSVVELRQSSVMQRLLIGWMPTA
IRGDQGPSARPLSLAVHCVEHDAFIFALCQDHKLRMWSYKDQMCLMVADMLEFVPVNKDL
RLTAGTGHKLRLAYSPSMGLYLGVYLHAPKRGQFCVFQLVSAENNRYSLDHISSLFTSQE
TLIDFALTSTDIWALWHDAENQTVVKYINFEHNVAGQWSPVFMQPLPEEEIVIRDDQDPR
EMYLQSLFTPGRFINAALCKALQIFCRGAERNLDLSWTELKKEVTLAVESELQGSVTEYE
FSQEEFRSLQQEFWCKFYACCLQYQEALSHPLALHLNPHTNMVCLLKKGYLSFLVPSSLV
DHLYLLPDENLLTEDETTISDDVDVARDVMCLIKCLRLIGESVTMDMSVMMEMSCYNLQS
PEKAAEQILEDLITIDVDNVMEDICSKLQEIRNPIHAIGLLIREMDYETEVEMEKGFNPA
QPLNIRMNLSQLYGSSTAGHVVCRSVCKIASTRFLICRDLLILQQLLMRLGDAVILGAGQ
LFQAQQDLLHRTAPLLLSYYLIKWGSQCLATDVPVDTLESNLQHLSVLELTDSGALTANK
FVSSPQTIVELFFQEVARKHIISHLFSQPKAPLSQTGLNWPEMITAVTNYLLQLLWPSNP
GCLFLECLMGNCQYVQLQDYIQLLHPWCQVNVGSCRFMLGRCYLVTGEGQKALECFCQAA
SEVGKEEFLDRLVRSEDGETVAAPRLQYYDKVLRLLDVVGLPELVIQLATSAITEAGDDW
KSQATLRTCIFKHHLDLGHNSQAYEALTQIPDSSRQLDCLRQLVVVLCERSQLQDLVEFP
YVNLHNEVVGIIESRARAVDLMTHNYYELLYAFHIYRHNYRKAGTVMFEYGMRLGREVRT
IRGLEKQGNCYLAAINCLRLIRPEYAWIVQPASGAVYDRPGASPKRNHDGECTAAPPNRQ
IEILELEGLEKECSLARTRLTLAQHDPAAVAVAGSSSAEEMVTLLVQAGLFDTAISLCQT
FKLPLTPVFEGLAFKCIKLQFGGEAAQAEAWAWLAANQLSSVITTKESSATDEAWRLLST
YLERYKVQNNLYHHCVINKLLSHGVPLPNWLINSYKKVDAAELLRLYLNYDLLEEAVELV
SEYVDAVLGKGHQYFGIEFPLSATAPMVWLPYSAIDQLLQALGENTANSHNIALSQKILD
KLEDYQQKVDKATRDLLYRRNL
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggagccgtggaacggagcttcgtggaactcagcggagctgagcgcgaa
aggccgaggcactttcgggagttcaccgtttgcggcattggaactgcaaatgcagcggcc
ggagccgtgaaatacggtgagagcgcgggaggcttctactatgtggaaagtggcaagttg
ttctccgtcaccagaaacagattcattcattggaaaatctctggagatacattggagctg
gtggaagagtcattggacatcaatctgttgaataatgcagttcgcctcaaattccaaaac
tgcgtccttctacccggaggagttcatgtctctgagactcagaatcatgtgataatcttg
atattaaccaatcagacagtgcataggttgcttttaccacacccttcccggatgtatagg
agtgagttggcaatcgaaagtcagatgcagtcaatattcactgacatcggaaaagttgat
ttcagggatccttgcaactatcagttaattccggcagtccctggcctctcacccagttct
gccacctcagcggcctggctgagcaatgatgggggggctctgtttgctctcccgtctgcc
tctgggggaatctttgttcttaaactacctccttatgacatacctggggtggtgtcagtc
gtggagctgagacagagctcggtgatgcagcgcctgctcataggctggatgcccacagcc
atcagaggtgaccaggggccttcagcccgtcccctcagccttgctgtgcactgcgtggag
cacgacgccttcatctttgctctgtgtcaggatcacaagctgcgaatgtggtcttacaag
gaccaaatgtgcctgatggtggctgacatgctggaatttgtccccgtaaataaagatctc
cggctcactgctgggactggacacaaactgcgacttgcttattccccttccatggggctc
tacctgggagtgtacctgcatgccccaaagcgaggacagttctgcgttttccagttggtg
agcgctgagaataaccgctatagcctagatcacatctcctcactgttcacttctcaggag
acactgattgactttgccttaacctctacggacatctgggccctgtggcacgacgctgag
aaccagacagttgtgaaatacatcaactttgaacataatgttgcaggtcagtggagtccg
gtttttatgcagcctctgccagaggaagaaatcgtcatccgggatgatcaagaccccaga
gagatgtatttgcagagtctttttacaccagggcgattcattaatgcagccttatgtaaa
gctttacagattttctgtcgaggagctgagaggaatttagacctttcctggacagaacta
aagaaagaagttactttagctgttgaaagtgagctccagggaagtgtaacagagtatgaa
ttttcccaggaagagttccgaagtttacagcaggaattctggtgcaagttctatgcctgc
tgtcttcagtatcaagaagccctttctcatcctcttgccctgcatttgaatccacacaca
aacatggtgtgcctgttgaagaaagggtacctgtctttccttgtgccttcctccctagtg
gatcatttgtatctcctccctgatgagaatcttttgacagaggatgagacaaccatatct
gatgacgtggatgttgctcgggatgtcatgtgtcttataaaatgccttcggctgattgga
gagtcagtaactatggatatgtcagtaatgatggaaatgagctgttacaacctacagtct
ccagaaaaggctgcggaacagattctggaagatttgatcactattgatgtagacaatgtg
atggaggatatttgtagtaaactacaggagattaggaacccgatccatgccattggactt
ctaatacgggaaatggattatgaaacagaagtagaaatggaaaagggattcaatccagct
cagcctttgaatattcgaatgaatctttctcagctctacggtagtagcacagcggggcat
gtcgtgtgcagaagtgtgtgtaaaatcgccagcacacgcttcctcatctgccgagacctt
ttgatcttacagcagctcctaatgaggctaggagatgcggtgatcttgggagctggccag
ctctttcaagcccagcaagacctactgcatcgaacagctcccctactcttgtcttattac
ctcattaagtggggaagtcagtgcttggcaactgatgttccagttgacacattggagtct
aatcttcaacatttatcagtactggaactaactgactctggtgctttaacggcaaataag
tttgtgtctagccctcagacaattgtggaattattcttccaagaagttgcaagaaaacac
attatatctcatctgttctctcaaccaaaggcacctctaagccaaactggattgaactgg
ccagagatgatcaccgcagttaccaattatttattgcagctcttatggcctagcaatcct
ggctgtctctttctagaatgtttgatgggaaattgtcagtatgtacaattgcaggattat
attcagttgctgcatccgtggtgtcaagtcaacgttggttcctgccgatttatgctggga
cggtgttacctggttacgggagaggggcagaaggctctggaatgtttctgccaggcagcg
tccgaagtgggcaaagaggagttcttagaccgcttggtccgttcagaggatggagagact
gtggccgccccccggctgcagtattatgataaggttttgcgtctgctggatgtcgtaggt
ttgcctgaactggttattcagttggccacatcagcaataactgaggcaggtgatgactgg
aaaagtcaggccacattaaggacatgtattttcaaacatcatttggatctaggtcacaat
agccaagcctatgaagccttaacccaaatccctgactccagcaggcagttggattgtctg
cggcagctggtggtagttctctgtgaacgctcccaacttcaggatctcgtggagtttccc
tatgtgaatctgcataatgaggtggtgggaataattgaatcacgggcaagagctgtggac
ctcatgactcacaattactatgagcttctgtatgcctttcacatttatcgtcacaattac
cggaaggctggcacagtgatgtttgagtatggaatgcgtcttggcagagaggttcgaact
atccggggacttgagaagcaaggcaactgttacctggctgctattaattgcttacgactt
attcgcccagaatacgcgtggattgttcagccagcatctggtgcagtgtatgatcgccct
ggagcatcccctaagaggaatcatgatggagaatgcacagctgccccaccgaacagacag
attgaaatcctggaactggaaggtctggagaaagagtgttccttggcccgcacgcgcctc
accctggctcagcacgaccccgcggcggtcgcggtcgcaggaagttcatccgcagaggag
atggtcactctcttggttcaggctggcctttttgacactgccatatcactgtgtcagact
tttaagcttcccttaacgccagtctttgaaggacttgctttcaaatgcatcaagctgcag
tttggaggagaggcggcacaagccgaagcctgggcctggctggcagccaaccagctctcg
tcagtcatcaccactaaggagtctagtgctacagatgaagcttggcggctattatcaact
tacctggaaaggtacaaagtccagaataacttatatcaccactgtgtaatcaacaagctc
ttatcgcatggagttcctctgcctaactggctaataaacagttacaagaaagttgatgca
gctgagttgctccgtctgtacttaaactatgaccttttagaagaagctgtggagttggtt
tcagaatatgtggacgctgtactgggaaaaggacatcagtactttggaattgagttccca
ctgtccgccacggctccaatggtgtggctcccatactctgccattgatcagcttctccag
gctctgggagagaacactgccaacagtcacaacatcgcgctgtcccagaagatacttgac
aaattggaggactaccagcaaaaagttgataaggcaacacgggatttgctgtatcgtcgg
aacttgtga
DBGET
integrated database retrieval system
