Cervus canadensis (wapiti): 122450150
Help
Entry
122450150 CDS
T07554
Symbol
TRIM21
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM21
KO
K10651
tripartite motif-containing protein 21 [EC:
2.3.2.27
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09160 Human Diseases
09163 Immune disease
05322 Systemic lupus erythematosus
122450150 (TRIM21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122450150 (TRIM21)
04131 Membrane trafficking [BR:
ccad04131
]
122450150 (TRIM21)
04121 Ubiquitin system [BR:
ccad04121
]
122450150 (TRIM21)
Enzymes [BR:
ccad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122450150 (TRIM21)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122450150 (TRIM21)
Membrane trafficking [BR:
ccad04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
122450150 (TRIM21)
Ubiquitin system [BR:
ccad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122450150 (TRIM21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4_2
zf-RING_2
zf-RING_6
zf-C3HC4_3
zf-RING_5
zf-rbx1
zf-Nse
Med11
U-box
zf-RING_4
PanZ
RING_XB3-XBAT31
zf-RING_10
Sina_RING
zf-C3HC4_5
zf-UDP
Motif
Other DBs
NCBI-GeneID:
122450150
NCBI-ProteinID:
XP_043338279
LinkDB
All DBs
Position
11:46040530..46053809
Genome browser
AA seq
469 aa
AA seq
DB search
MASAIPLTMMWEEVTCSICLDPMVEPMSIECGHSFCQECISEVGKDGGSVCPVCRCHFLL
QNLRPNRQVANMVDNLRKISQGAKEGPHGELCAVHREKLHLFCEEDGKALCWVCSQSQKH
RDHPMVPIEEAAQEYQEKLQVALKKLRDKQELAEKLELDIAMKKASWKGKVEAHKLRIHE
EFVRQKNFLAEEEQKQLQKLEEEERQHLRTLGDTEARLAQQVQALQELIAELERRRRGSA
LELLQEVKSVLERSESWNLKELDVTSTDLRNVFYVPGIKKMLRTCGVHITLDPQTANPWL
ILSENRRQVRLTNTRQDVPENEERFDAYPMVLGAQRFNSGKVYWEVDVTGKEAWDLGVCR
DNVRRKGQFSLNSDNGFWIIWLWNKQKYEAGTCPQTPLHLQVPPSRVGIFLDYEANTVSF
YNITDHGSLIYTFSECAFAGPLRPFFNPGFNDRGTNSAPLILCPLKTGW
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagccatacccttgacaatgatgtgggaggaggtcacgtgctctatctgcctg
gatcccatggtggagcccatgagcattgaatgtggtcacagcttctgccaggagtgcatc
tctgaggtcgggaaagacggcggcagcgtctgtcctgtgtgcaggtgccacttcctgctc
cagaacctccggcccaatcgacaggtagccaacatggtggacaaccttagaaagatcagc
cagggtgccaaggagggcccccacggggagctgtgtgcggtgcacagagagaaacttcac
ctcttctgtgaggaagatgggaaggccctttgctgggtgtgttcccagtcccagaaacac
cgtgatcatcccatggtccctattgaggaggctgctcaggagtaccaggagaagcttcag
gtggcattaaagaaactaagagataagcaggagttggctgagaagctggaactggacatt
gcaatgaagaaagcatcctggaaggggaaagttgaggcgcacaaattgagaattcatgaa
gagtttgtaaggcagaaaaacttcctggctgaagaggagcagaagcaactgcagaagcta
gaggaggaggagaggcaacacctgagaaccctgggggacacagaggccaggctggcccag
caggtccaggccttgcaggagctgatcgcagagctggagaggaggaggcggggctcggcg
ctggagctgctgcaggaggtgaaaagtgtcctggaaaggagtgaatcctggaacctgaag
gagctggatgtcacctccacagacctgaggaatgtattctatgtgcccgggattaagaag
atgctgaggacgtgtggagtacacatcaccctggatccacagacagccaatccatggctc
atcctttcggagaatcggagacaagtgaggcttacaaacacccggcaggacgtgcctgaa
aatgaggagagatttgatgcttaccccatggtactgggtgcccagcgctttaactccggg
aaagtttactgggaggtagatgtgacgggaaaggaagcctgggacctgggggtttgtaga
gacaatgtgcggaggaaggggcagttttcgctcaactccgacaatggcttctggattatc
tggctgtggaacaaacagaaatatgaggctggcacctgcccccagactcccctccacctt
caggtgcctccaagccgagttgggatcttcctagattatgaggccaacactgtctctttc
tacaacatcactgaccacggctccctcatctacaccttctccgaatgtgcctttgctgga
cctctgcggcccttcttcaatcctggtttcaatgatagaggaacaaactcagcccctctg
atcctctgtccacttaagacaggctggtag
DBGET
integrated database retrieval system
