Cervus canadensis (wapiti): 122450898
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Entry
122450898 CDS
T07554
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04140
Autophagy - animal
ccad04211
Longevity regulating pathway
ccad05010
Alzheimer disease
ccad05014
Amyotrophic lateral sclerosis
ccad05016
Huntington disease
ccad05017
Spinocerebellar ataxia
ccad05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122450898 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
122450898 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
122450898 (RB1CC1)
05014 Amyotrophic lateral sclerosis
122450898 (RB1CC1)
05016 Huntington disease
122450898 (RB1CC1)
05017 Spinocerebellar ataxia
122450898 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
122450898 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccad01009
]
122450898 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122450898 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
ccad03029
]
122450898 (RB1CC1)
Protein phosphatases and associated proteins [BR:
ccad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122450898 (RB1CC1)
Membrane trafficking [BR:
ccad04131
]
Autophagy
Autophagosome formation proteins
ULK complex
122450898 (RB1CC1)
Mitochondrial biogenesis [BR:
ccad03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122450898 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
122450898
NCBI-ProteinID:
XP_043339207
LinkDB
All DBs
Position
12:complement(20579629..20620751)
Genome browser
AA seq
1589 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILSERLPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
SVEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRVDSLPEREGSEKAETKTSTEL
VLSPDTPAATSKPSLTSFHSSVEHVAPDTADAESGKDVREPCPSPAQQDAAAVEAKEGDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFMAECRQTIANLDNQNMKA
IKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKRESFGKL
FRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASASQTSPQSASSPRLESATG
ITTTTSPRTPPPLAVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEHTLHQASLDL
DSLAESPESDFMSAVNEFVIEEQLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTS
APSQEDLGDHASLSVQLGRCRTSAHDSHLSIQTLKEDFCHFRTFVQKEQCDFANSLQCTA
VEIRSIIDKVKHSLEITLHEKHQKELESLKSEYEGRLATLVKESEENKSKITKLRGDLVC
LEEVLQNKDNEFALVKHEKEAVICLQKEKDQKLLEMERTVHTQHCEMEALRQSHEAALED
LKKLHVENDEKLQLLRAELQRLEQSHLKELEDTLHGRHTQELEKAMSEHRLCLEKLEMEN
QQRIEQIQDSHAAVMQEKEQQLQELKLKVSDLSDTRCKLEVELALKEAETDEIKMLLEES
RAQEKKTLQSVFEKETEQLRAEISKLNQKIHDNNENYQVGLAELRTLMTVEKDQCISELI
SRHEEESDRLTTDLNKMTSLYQQAFEIEKGLKEELAELQSKLDLELSALEKQKDEKISQQ
EDMYKAIIQKLEKDKEEFVMRQERDREQLVQRLNCEREAAIETAKKEMHLEREAVEKELL
EKVKHLESQLAKSHAMESAREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVR
TSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEE
KKRLEEEVSRLRGGAFVPSPGMAAAPELYGACAPEPPVEALDTLGEGRPDSAMETSMMSV
QENVHVLSEERQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGD
LVLIILDERHDNYVLFTVSPTLYFLHAESLPALDLRPGEGASGASRRPWVLGKVMEKEYC
QAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtatttctggtgaacactggaaccaccctgacatttgacactgaactt
acagtgcaaactgtggctgacctgaagcatgcaatccacagcaagtacaagatcgccatc
cagcaccaggtgctggtggtcaacgggggcgagtgcatggctgccgaccgcagggtgtgc
acctacagcgccgggacggacacaaatccaatttttctttttaacaaggaaatgatcttg
tctgagcgtctacctgctattcctaaaactaccttttcaacagaaaatgacatggagata
aaagtcgaagagtcccttatgatgcctgccgtttttcacactgttgcttcaaggacacag
cttgcagtggaaatgtatgaagttgccaagaaactctgctctttctgtgaaggtctggtc
catgatgaacatcttcagcaccaaggctgggctgcaatcatggccaatctggaagattgc
tcaaattcctaccaaaagctgcttttcaaatttgaaagtatttattcaaattatctgcaa
tccgtagaagacatcaaattaaaacttactcatttaggaactgcggtttcagtcatggcc
aagattccactgttggagtgcctcaccagacacagttacagggaatgtctggggagagtg
gattccttgcctgaacgcgaaggctcagaaaaggctgagacgaagacctccactgaactg
gtgctctctcctgatacacctgcagcaacgagcaaaccctctttaacctcatttcactcg
tctgtggagcatgtagccccagacaccgcagatgctgaaagtggaaaagatgtgagggag
ccttgtccaagccctgcccagcaggacgcagctgcagtagaggctaaagagggggacctg
cctttctttaatgtttctctgttggactggatcaacgtgcaggacaggcctaatgacgtc
gagtccttggtcaggaagtgctttgattccatgagcaggcttgatccccggatcattcga
ccctttatggcagaatgccgtcagactattgccaatctcgataatcagaacatgaaagcc
atcaagggcctggaggacaggctgtacgccctggaccagatgattgccagctgcggccga
ctggtcaacgagcagaaagaactcgctcagggatttttagctaatcagatgagagccgaa
aacttgaaggatgcatctgtgctacctgatttgtgcctgagtcatgcaaatcagttgatg
attatgttgcaaaaccatagaaagctgttggacattaaacagaagtgcaccactgccaaa
caggagctcgcaaataaccttcacgtcagactcaagtggtgttgctttgtgatgctccac
gctgatcaggatggagagaagttgcaggccttgctccgcctggttatcgagctcttagag
agagtcaagatagtagaagctctgagcacagttcctcagatgtactgcttagctgttgtc
gaggttgtcaggagaaaaatgttcataaaacactacagggagtgggccggtgctttagtc
aaggacggaaagcagttatatgaggctgagaagtcaaaaagggaatcctttgggaaatta
tttaggaagtcttttctaagaaatcgtctgttcaggggattggactcctggcccccatcc
ttttgtacacagaagcctcgaaagtttgactgtgaacttccagatatttcattaaaagat
ttacagtttctgcaatcattttgtccttctgaagttcagccattcctcagggttccctta
ctttgtgactttgaacctctccaccagcatgtactcgctctgcataatttggtaaaggca
gcacaaagtttggatgaaatgtcacagaccattacagacctgctgagtgaacaaaaggcc
tctgcgagtcagacgtccccgcagtcggcttcctcgccccggctggaaagcgcgacagga
atcacaaccactacctcacccaggacaccgcctccactcgccgtgcaggatcctctgtgt
cctgcggtctgccccttggaggagctgtcgccagacagcatcgacgcccacacgttcgac
tttgagactatcccccatccaaatatagagcatactctccaccaggcctccttagacttg
gattcgctagcagaaagtcctgagtcggactttatgtctgcggtgaatgagtttgtcata
gaggagcagctatcgtctccaaaccccatcagtgacccgcagagcccggagatgatggtg
gagtccctctactcctctgtcatcaatgccattgacagcagacggatgcaggacaccagt
gcccccagtcaggaggatctgggcgaccacgcgtccctcagcgtccagctggggaggtgc
cgcacatccgcccacgactcacacctcagcattcagaccctgaaggaggacttctgccac
ttccggacgttcgtgcagaaggaacagtgcgactttgccaattccttgcagtgtacagca
gtagaaataagaagcattatcgacaaagtaaagcactctttggaaataacactacatgaa
aaacatcaaaaagaactagagtctttaaaaagcgagtatgagggcaggcttgctactctg
gtgaaggagagtgaagagaacaagagcaagatcaccaagctgcggggggacctggtgtgc
ctggaggaggtgctgcagaataaggacaatgagttcgctctggtcaagcacgagaaggaa
gccgtcatctgcctgcagaaagagaaggaccagaagctgctcgagatggagcgcacggtg
cacacccagcactgtgagatggaagccctgcggcagtcgcacgaggctgcgctggaggac
ttgaagaagctccacgtggagaatgacgagaagctccagctactgcgggcagagctccag
cgcctggagcagagtcatctgaaggagctggaggacacactgcatggccgtcacacacag
gagttggagaaggccatgagcgagcacaggctctgcttggagaaactagaaatggaaaac
cagcagaggattgagcagatccaagattctcatgccgcagtcatgcaggagaaggagcag
cagctccaggagttaaagctcaaggtttcggatttgtcggacacgagatgtaagttggag
gtggagctggctctgaaggaagcagaaactgacgagataaaaatgttgctggaagaaagc
agagcccaggagaagaagaccttgcagtctgtctttgaaaaagagactgaacagttgaga
gcagagatcagtaaactaaaccaaaagattcacgacaataatgaaaattatcaggtgggc
ttggcagagctgagaactttaatgacagttgaaaaagatcagtgcatttccgagttaatt
agtagacatgaagaagaatctgataggcttacaactgatttaaacaaaatgacatcattg
tatcagcaagcatttgaaatagaaaaaggcctgaaagaagaattagctgaactgcagagt
aaattagacttagaattgagcgctcttgaaaaacaaaaagatgagaaaatctcccagcaa
gaggatatgtacaaagctattatccagaagctagagaaagacaaagaggaatttgtcatg
agacaggaacgggaccgagaacagctagttcagaggcttaattgtgaaagagaagctgct
attgagactgccaaaaaagaaatgcacttggaaagagaagctgttgagaaagagttgtta
gagaaagttaaacatcttgagagtcaattagcaaaaagtcatgccatggaatctgccaga
gaagattcttcaagcctagttgctgaacttcaagaaaagctccaggaagaaaaagctaag
tttctagaacaacttgaagagcaggagaaaaggaagaatgaggagatgcagaatgttcga
acatctttgatcgctgagcagcagaccaattttaacaccgttttaacaagagagaaaatg
aggaaagaaaacataatcaatgatctcagtgataagctcaagagcacaatgcagcagcag
gagcgggacaaagatctgatcgagtccctgtctgaggaccgtgcgcgtctgctggaggag
aagaagcgactggaagaggaggttagccggctgcggggcggtgccttcgtgccctccccg
ggcatggccgcagccccagagttgtatggggcctgtgcgcctgagcccccggtggaggcc
ctcgacacccttggtgaggggaggccagactcagccatggagaccagcatgatgtctgtc
caagaaaacgtccacgtgctctctgaagaaagacagcggataatgctgttggaacgaaca
ctacagttgaaagaagaagaaaacaagcggttaaatcagagactgatgtctcagagcatg
tcttccgtatcctcgaggcattctgagaagatagccattagagatttccaggtgggcgac
ctggtgctcatcatcctggacgagcgccacgacaactacgtgctcttcaccgtgagcccc
accctctacttcctgcacgccgagtccctgcccgccctggacctcaggccgggagagggc
gcttcaggtgcatctcgaagaccgtgggtccttggaaaagtgatggaaaaggagtactgc
caggccaaaaaggcacaaaacagatttaaagttcctttggggacaaagttttacagagtg
aaagctgtgtcatggaataagaaagtgtaa
DBGET
integrated database retrieval system
