Cervus canadensis (wapiti): 122450978
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Entry
122450978 CDS
T07554
Symbol
POP1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122450978 (POP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccad03009
]
122450978 (POP1)
03016 Transfer RNA biogenesis [BR:
ccad03016
]
122450978 (POP1)
03029 Mitochondrial biogenesis [BR:
ccad03029
]
122450978 (POP1)
Enzymes [BR:
ccad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
122450978 (POP1)
Ribosome biogenesis [BR:
ccad03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
122450978 (POP1)
Transfer RNA biogenesis [BR:
ccad03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
122450978 (POP1)
Mitochondrial biogenesis [BR:
ccad03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
122450978 (POP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
122450978
NCBI-ProteinID:
XP_043339287
LinkDB
All DBs
Position
12:complement(62612855..62649025)
Genome browser
AA seq
1012 aa
AA seq
DB search
MSNAKERKHAKKMRNQPTNVTLSSGFVADSGVKHHNGGGKPFQSQKESHPGTSRQRQTRT
THRPLAESDAKEQPSSRVTFRKKGGWKAGPEGTSQEIPKYITASTFAQARAAEISAMLKA
VTQKSSNSLVFQTLPRHMRRRAMSHNVKRLPRRLREIAQKEAEKAVHQKKEHSKNKCHKA
RRCHINRILEFNRRQKKNKWLETHIWHAKRFHMVKRWGYCLGERPTVKSHRACYRAMTSR
CLLQDLSYYCCLELKGKEEEILKALSSMCSIDTGLTFAAVHCLSGKCQGSVMLYRANKYP
LEMLGPVTFMWKARGAPGDTAESRQLWIWLHPALKQGILEEVKAVCQCMEPTEATVWIPD
PLLTPSQEKSQIDLPEEKIGKKRKRKDDGENTQPVKKVIGDGTRDPLQPYSWLSPSTGIV
IRDLTMEMNRFRLIGPLSHCILTEALKAASVHTEGEDTEKTPHRWWIESCKNPDSVSLHH
RQAAIFDLLGGITSPAEIPAGTILGLTVGDPRINLPQKRSKVLPNPEKCQDNEKVRQLLL
EGVPAECSHSFLWNQDISKSVTENKISDQDLNRKRSELLVPGSQLFLGPHESKVPILLIQ
QPGKVTGDDQRGWGSGWDVLLPKGWGMAFWIPFIYRGARVGGLKETSVHSQYKRSPNVPD
DFPDCPAGVLFAEEQAKHLLEKYKRRPPAKRPNYVKLGTLAPFYCPWEQLTRDWESRVQA
QEEPPAASSPSGGESRDGVPCVPGPGRTAQLSENQGTPLRDSSEPEGVMDTDCPAGVEPD
GAASQSAASSRLCVLRSRRLLRQLSAWCGPRSGGGRATQRAGRGQQGLTGEACLAVLDGF
PRALVWVRLALLGKGSPGPHTLICVPDKEDLLQLGHDRLYCGPQEPKHSDPFKSQIREQK
EKKKLKKRPNRGCAASEGLAEGDPAAGPQPLTLGLWSGPLPVVTSHCSRALLGFVTQGDF
SMAVGYGEALGFVSLTGLLDMLSRQPGPERGLVLLRPPASLQYRFARITIEV
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatgcaaaagaaagaaaacatgcaaagaaaatgagaaaccagcccaccaatgtg
actttatcctctggctttgtggctgacagtggtgtaaagcaccataatggaggtggaaaa
cctttccagtctcaaaaagagtctcatcctggaacttcccgacagcggcagaccagaacg
acccaccgtccgctggctgagtctgatgcgaaagagcagccttcctcgagggtaaccttt
agaaaaaagggaggatggaaagcgggtcccgagggcacttctcaggagattcccaagtat
ataactgcttctacttttgctcaagcccgagctgctgaaatcagtgccatgttgaaagca
gtgacccagaaatcttctaattcgctggttttccagactctgccacggcacatgagacga
agagccatgagccacaatgtcaaacgccttcctcggcggttacgggagattgcccagaaa
gaggcagagaaagcggttcatcagaaaaaagaacactcaaaaaataagtgccataaagct
cgacgatgtcacataaaccgcatactggaatttaaccggagacagaagaagaacaaatgg
ctggaaacgcacatctggcacgcgaagcggtttcacatggtcaagaggtggggctactgc
ctgggggagaggccgacagtcaagagccacagagcctgctaccgggccatgacgagccgc
tgcctcctccaggatttatcctactactgttgtttggagttgaagggcaaagaggaagaa
atactgaaagcactttcttcaatgtgtagcatagacacaggattgacttttgctgcagtc
cactgtttgtctggaaagtgccaagggagcgtcatgctttacagggcaaataaatatccc
ctagaaatgctgggtcctgtgacatttatgtggaaggcccggggggcgcctggtgacact
gctgagagcaggcagctgtggatctggcttcacccagctctgaaacagggtatcttagag
gaggtaaaagcagtgtgccagtgtatggaacctaccgaggcaactgtctggatcccagat
ccccttctgacaccgtctcaagagaaaagccagattgacctgcctgaagaaaaaatcggc
aagaaaagaaaacggaaagatgatggggaaaacactcaaccagttaaaaaagtcattggt
gatggaactagagatccacttcagccatattcttggctctccccaagcacaggcatcgtg
atccgtgatttgacgatggagatgaacagattccggctgatcggtcctctttctcactgc
atcttaactgaggcgctcaaagctgcttccgtccacaccgagggagaggacacagagaag
acacctcaccgttggtggattgaaagctgcaagaatcctgatagtgtttcccttcatcac
agacaagcagccatttttgacttgctgggaggaataacatcaccagcagaaattccagca
ggtactattctgggactgacggttggtgatccacgaataaatctgcctcaaaagaggtcc
aaagttttgcccaatccagaaaaatgccaagataatgagaaagttagacagctgcttctg
gagggtgtgcctgcggagtgctcgcatagctttctctggaaccaagatatctctaagagt
gtcacagagaataaaatctcggatcaggatttaaaccggaagaggagtgaattgctggtg
cccgggtcacaactttttttaggtccccatgaatccaaggttcctatacttttgattcaa
caaccaggaaaagtgacgggtgatgaccagcgaggctggggaagtggctgggatgtcctg
ctcccaaagggctggggcatggcgttctggattccatttatctatcgaggtgcaagagtc
ggagggttaaaagaaacctcagtacattctcagtataaaaggtcgcctaatgtcccagac
gatttcccagactgccctgctggggttctctttgctgaagagcaagcgaaacaccttctt
gagaagtacaagagacgtcctcctgcaaaacggcccaactacgttaagcttggcaccctg
gcacctttttactgtccctgggagcagttaactcgagactgggagtcaagagtccaggct
caagaggaaccgcctgcagcttcctctccaagtggtggggagagcagagatggggtgcct
tgtgttcccgggcctggaaggactgctcagctgtctgagaaccagggcacacccctgcgt
gactccagtgagcctgagggagtcatggacacggattgtccagccggggtggaacccgac
ggggcggccagccagagtgccgctagcagccgcctttgcgttcttaggagtagaagatta
ctgaggcagctgtcagcctggtgtgggcccaggtctgggggcggtcgggcgacccagcga
gccggcagagggcagcaaggactgactggagaggcctgcctggccgtgctggacggcttc
cccagggccctggtgtgggtcaggctggccctgctggggaagggcagccccggcccgcac
accctgatctgcgtcccagacaaggaggatctcctgcagctcggccacgatcggctgtat
tgtgggccccaggagcccaagcacagcgacccattcaagagccagatccgggaacagaag
gagaagaagaagctgaagaagaggccgaaccgagggtgtgccgcatctgagggcctggca
gagggggaccctgcggccgggccccagcccctgaccctgggcttgtggtcaggccccctc
ccggttgtgacttctcactgctccagagctctccttggctttgtcacccagggagatttt
tccatggccgtcggctatggggaagccctggggtttgttagcctgacgggcttgctggac
atgctgtccaggcagccagggccggagaggggcctcgtgttgctgaggccgcctgcctcc
ctgcagtatcggtttgcgagaatcacaattgaggtgtga
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