Cervus canadensis (wapiti): 122451046
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Entry
122451046 CDS
T07554
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122451046 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccad03400
]
122451046 (RAD54B)
DNA repair and recombination proteins [BR:
ccad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
122451046 (RAD54B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
AAA_34
Motif
Other DBs
NCBI-GeneID:
122451046
NCBI-ProteinID:
XP_043339463
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All DBs
Position
12:66187235..66305749
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AA seq
939 aa
AA seq
DB search
MRRSAAPSQLQGNPFKKPKFISPARSHPSPNEEVAKLNSEIKLFEIAANKNNFLQPQNDP
RICNFNLPTEECAKGINHGDNHREKYCLEASTKATLDLHHTVHSAPKEITVSKGQEEKPD
SLVKYFSVVWCKASKKKHKKWEGDAVLIVKGKSFTLKDLEGKDIGRGIGYKLKELEKIEE
GQTMMIGGKEIEVMGIISPDDFNSGRCFQFGGGCSAVLSSSQAAKKCFSNPFKSVCKLSS
KENKQNSFQNCKPRHDPYAPTPYLPGIHLENESFFWLLRNLGRSTENLPPDSLVMLRPDK
NHQWLFNKTCFPVVDVVIDPHLVYYLRPHQKEGVIFLYECVMGMRVNGRCGAILADEMGL
GKTLQCISLIWTLQCQGPYGGKPIIKKTLIVTPGSLVNNWRKEFQKWLGIERIKIFTVDQ
DHKVEEFTKSPFYSVLIISYEMLLRSLDQIKTVKFDLLICDEGHRLKNSAIKTTTALISL
SCEKRIILTGTPVQNDLQEFFTLIDFVNPGILGSLSAYRKIYEEPIIISRQPSASEEERK
LGEQRAAELTCLTGLFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRQLLNSQAVRF
CLQGLLENTSHLICIGALKKLCNHPCLLFGSIKEKESNSTWDESEERNLYEGLMNVFPAD
YNPIMFTEEESGKLQVLSKLLAVIRELRPAEKVVLVSNYTRTLDILQEVCKRHGYTYTRL
DGQTPISQRQKIVDGFNSKYSSDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQA
MSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLAKTSDHIQFSVEELK
NLFTLHESSHCVTHDLLDCECTGENHTGDSLEKFPVSRSCQLGPHHQKSDSLKPLSMSQL
KQWKHFPGDHLNLIDPFLERIRENVSFFFQNITNQTIAI
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgagacgatcagcagcaccaagtcagttgcaagggaatcccttcaaaaaaccaaagttt
atatcaccagcaagaagtcatccaagtcctaatgaagaggttgcaaaactgaattcagaa
ataaagttatttgagattgctgcaaataagaataattttctccagccacaaaatgatccc
agaatatgcaattttaatttgcctactgaagaatgtgctaaaggaattaatcatggggat
aatcacagggaaaaatattgtttggaagcatctacaaaggcaacattagatctacatcat
acagttcattcagcccctaaagaaataacagtgtctaagggacaagaagagaaacctgat
agcctagttaaatatttcagtgttgtttggtgtaaagcttcaaagaaaaaacacaaaaag
tgggaaggtgatgctgttcttattgtaaaaggaaagtcatttaccttaaaggatttggag
ggcaaagacattggaagaggcattggatataaattgaaagagcttgaaaagattgaagag
ggtcaaacaatgatgattggtggaaaagaaatagaagtcatgggtatcatctctccagat
gatttcaacagtggaagatgttttcagtttggaggaggatgttctgctgtcttaagttct
tctcaagctgccaagaagtgtttctctaaccctttcaaaagtgtctgtaaactcagttca
aaggaaaataaacagaacagtttccaaaattgcaaaccacgccatgacccatatgcacca
accccttacctgccaggaattcacctcgaaaatgagagtttcttttggttgctcagaaac
ctgggaagatccacagaaaaccttcctccagattcccttgttatgctccgaccagataag
aatcaccagtggctgttcaataagacctgttttcctgttgtggatgtagtgatagatcct
caccttgtatattaccttcgaccacatcagaaagaaggggtcatattcctttatgaatgt
gtgatgggaatgagggtgaatggcagatgtggagctattcttgccgatgaaatgggttta
gggaaaacactgcaatgtatttcgcttatctggaccctacagtgtcagggaccctacgga
ggcaagccaataataaagaagacacttattgtcacacctggaagcttggtgaataattgg
aggaaagaattccaaaaatggctaggaattgaaaggatcaagatatttactgttgatcag
gaccacaaagtagaagaattcaccaaatctccattttattctgttcttatcatcagttat
gaaatgttacttcgttccctggatcaaattaagactgtaaaatttgatcttctaatttgt
gatgaagggcatcgtttgaagaacagtgcaattaagacaactacagccctcattagcctc
tcttgtgagaaaaggataattttaactggtactccagttcagaatgatctccaagaattt
tttacattaattgattttgtaaatccaggaatattaggctctttgtcagcttatagaaaa
atatatgaagaacccattattatatcaagacaaccttctgcttctgaggaagaaaggaag
ttaggagagcaaagagcagctgaacttacttgcctcactggactcttcatccttagaaga
acccaagaagtcataaataaatatctccctcctaaaatagagaatgtagtcttttgccga
ccaggagccctacagattgaactttatagacaactgttaaattctcaggccgtcagattc
tgtcttcaaggattgttggaaaatacttctcatctaatatgtattggagctcttaaaaaa
ctgtgcaatcacccctgccttttgtttggctcaataaaggaaaaagaaagcaactcaact
tgggatgagagtgaagaaagaaatctctatgaaggcttgatgaatgtgttccctgctgat
tacaacccgatcatgtttactgaggaagagtctggaaaactgcaggtgctgtcaaagctc
ttagccgttatccgcgaacttcgtcctgctgaaaaagttgtgttggtatccaactataca
cgaaccttggatattttacaagaagtctgcaagcgtcatggatatacttatacaagactt
gatggacagaccccaatctctcaaaggcagaaaattgttgatggctttaatagtaaatac
tcttctgattttatttttttgttaagttcaaaagctggtggtgtggggcttaaccttatt
ggaggatctcacttaatcctctatgacattgattggaatccagctactgatatccaggca
atgtctagagtgtggagagatggtcagaagcaccctgtacatatttacagactcctaacc
acaggcacaatagaggaaaagatctatcaaagacagatcagtaaacaaggtctttctggg
gcagttgtagacctagccaagacatctgatcatattcagttttcagtggaagaacttaaa
aacttgtttacattgcatgaaagttcacattgcgttactcatgacctgcttgactgtgaa
tgtacaggagaaaatcatacaggtgattcattggaaaaattccctgtgtctagaagttgt
cagcttggtccacatcaccagaagtctgactccctgaaacctctctccatgtcacagctg
aaacagtggaaacattttcctggagatcatttaaatcttatagatccttttcttgaaaga
ataagagaaaatgtatcattcttttttcaaaatataaccaatcaaactattgctatataa
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