Cervus canadensis (wapiti): 122451131
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Entry
122451131 CDS
T07554
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03018
RNA degradation
ccad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122451131
09123 Folding, sorting and degradation
03018 RNA degradation
122451131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122451131
03041 Spliceosome [BR:
ccad03041
]
122451131
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122451131
mRNA degradation factors
5'-3' decay
Lsm complex
122451131
Spliceosome [BR:
ccad03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
122451131
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LSM14
Motif
Other DBs
NCBI-GeneID:
122451131
NCBI-ProteinID:
XP_043339645
LinkDB
All DBs
Position
12:complement(32289841..32290356)
Genome browser
AA seq
91 aa
AA seq
DB search
MAANATTSPSQLLPLELVDKCIGSRIHIVIKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLVPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaacgcgaccactagcccgtcgcagctgcttcctctagagcttgtggacaag
tgtataggatcaagaattcacattgtgataaagagtgataaggagattgttggcacactt
ctgggatttgatgactttgtcaatatggtattggaagatgtcactgaatttgaaatcaca
ccagaaggaagaagaattactaaactagatcaaattttgctaaatggaaataatataaca
atgctggttcctggaggagaaggacctgaagtatga
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