Cervus canadensis (wapiti): 122451371
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Entry
122451371 CDS
T07554
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
122451371 (COL14A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccad00535
]
122451371 (COL14A1)
Proteoglycans [BR:
ccad00535
]
Extracellular matrix (ECM) proteoglycans
Others
122451371 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
VWA_3
DUF5581
Motif
Other DBs
NCBI-GeneID:
122451371
NCBI-ProteinID:
XP_043340074
LinkDB
All DBs
Position
12:76941421..77166897
Genome browser
AA seq
1798 aa
AA seq
DB search
MKIFHCKMQYWVFPAFLVMTYFCTIVQGQVAPPTRLRYNVLSHDSIQISWKAPRGKFGGY
KLLVTPASGGKTNQLNLQNTATKAIIQGLMPDQNYTVQIIAYNKDKESKPAQGQFRIKDL
EKRKEPKPRVKVVDKGSENKPSVPEEEVKFFCQTPAIADIVILVDGSWSIGRFNFRLVRS
FLENLVTAFDVGSEKTRIGLAQYSGDPRIEWHLNAFNTKEEVIEAVRNLPYKGGNTLTGL
ALNYIFENSFKPEAGARTGVSKIGILITDGKSQDDIIPPSRNLRESGVELFAIGVKNADE
KELQEIASEPDSTHVYNVAEFDLMHTVVESLTRTVCSRVEEQDREIKASALATIGPPTEL
MTSEVTARSFMVNWTHAPGKVEKYRVVYYPTRGGKPEEVVVDGRVSSTVLRNLMSLTEYQ
IAVFAIYAHTASEGLRGTETTLSLPVASDLELYDVTEDSLRVRWNPVPGASGYLILYAPL
TEGLAGDEKEMKIGETHTDIELGGLLPNTEYTVTVYAMFGEEASDPVTGQETTLPLSPPR
NLRISNVGSNSARLAWDATSRRINGYRIVYNNADGTEINEVEVDPVTTFPLKGLTPVTEY
TVAIFSIYDEGQSEPLTGIFTTEDVPAQQYLEIDEVTTDSFRVSWHPLSADEGQHKLMWI
PVYGGRTEEVVLQEDQDSYVIDGLEPGTEYEVSLLALLDDGSESEVVTAVGTTLDSFWTE
PPTTEEAPTRPVTSVFRTGIRNLVVDDETTSSLRVAWDISDSSVQQFRVTYLTAQGDPAE
EVLGTIMVPGSQNTLLLKNLLSETEYKVTVTPIYDDGEGVSVSAPGKTLPPSGPQNLRVS
EEWYNRLRITWDPPSAPVKGYRIVYKPVSVAGPTLETFVGANINTIVITNLLSGMDYNVK
IFASQAAGFSDALTGVVKTLFLGVTDLQADAVQTTSLCAHWKVQRHATAYRVVLESRQDT
QKQESTLGGGTNRHCFYGLQPDSEYKISVYTKLQEMEGPSVSVTGKTQSLPTQPPTFPPT
IPPAKEVCKAAKADLVFMVDGSWSIGDENFNKIINFLYSTVGALGKIGADGTQVAMVQFT
DDPRTEFKLNSYKTKETLLDAIKRISYKGGNTKTGKAIKHVRDSLFTAESGTRRGIPKVI
VVITDGRSQDDVNKISREMQSDGYSIFAVGVADADYSELVSIGSKPSARHVFFVDDFDAF
KKIEDELITFVCETASATCPLVHKDGVDLAGFKMMEMFGLVEKEFSSVEGVSMEPGTFNV
YPCYQLHKDALVSQPTKYLHPDGLPSDYTISILFRILPDTPEEPFALWEILNKNSDPLVG
VILDNGGKTLTYFNYDYSGDFQTVTFEGPEIRKIFYGSFHKLHIVVSKTLAKVVIDCKHV
GEKAINASSNITLDGVEVLGRMVRSRGPNGNSAPFQLQMFDIVCSTSWANKDKCCELPAL
RDEEACPELPHGCSCSEINKAALGPAGPPGGPGLRGPKGQRGDPGLKGPDGPRGETGPPG
PQGPPGPQGPSGLSIQGMPGMPGEKGEKGETGLPGPQGVPGSIGSPGRDGSPGQRGFPGK
DGSSGPPGPPGPIGIPGAPGVPGVTGSMGPQGALGPPGVPGAKGERGERGDLQSQAMVRA
VARQVCEQLIQSHMARYTAILNQIPSHSSSVRTIQGPPGEPGRPGSPGTPGEQGPPGAPG
FPGNAGVPGSPGERGFTGVKGEKGNPGIGTQGPRGPPGPAGPSGESRPGSPGPPGSPGPR
GPPGHLGVPGPQGPSGQPGYCDPSSCSAYGVGAPHPDQPEFTPVQDELEAIELWGSGI
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttcactgcaagatgcagtactgggtgtttccagcatttttggtgatgact
tatttttgcaccattgtccagggtcaagtcgctccacccacaaggttaagatataatgta
ttatctcatgatagtatccagatttcatggaaggctccaagagggaaatttggtggatac
aaacttcttgtgactccagcttcaggtggaaaaaccaatcaactgaatctccagaacact
gcaactaaagcaattattcaaggtcttatgccagaccagaattacacggttcagattatt
gcatacaataaagacaaagaaagcaagccagcccaaggtcaattcagaattaaagattta
gaaaaaagaaaggagccaaaacccagagtgaaagttgtggacaaaggaagcgagaataaa
ccatccgtccccgaggaagaagtgaaatttttctgtcaaacaccggctattgcggatatt
gtaatcctggttgatggctcatggagtattggaagattcaacttcagactggttcgatct
tttttggaaaacctggttacagcattcgacgtgggctccgagaaaacacgaattggtctg
gctcagtatagcggtgaccccagaatagaatggcacttgaatgcctttaacacaaaagag
gaggtgatcgaagctgtccgaaacctaccgtacaagggaggaaatacactgacaggtctt
gctttgaattacatttttgaaaacagttttaaaccggaagcaggagcaaggactggagtg
tccaaaattggcattttaatcacagacggaaagtcccaagatgatattattccaccatcc
agaaacctgcgtgaatctggtgtagagctctttgccataggggtgaaaaacgcggacgag
aaggagctgcaggagatcgcctccgagccggacagcacgcacgtgtacaacgtggccgag
tttgacctgatgcacacggttgtggagagcctcacgaggaccgtgtgctccagggtggag
gagcaggaccgcgagatcaaggcctcagcccttgccaccattgggccacctacagaactg
atgacttctgaagtcactgccaggagctttatggttaactggactcacgcccccggaaaa
gtggaaaaatacagagtcgtgtattaccctaccaggggcggaaaaccagaggaggtggtg
gtggacggacgcgtatcttccacggtgctaagaaacctgatgtctctaactgaataccag
atagcagtctttgcaatatatgctcacacagctagcgaaggcctgcggggaaccgaaacc
acactttctttacctgtagcttccgaccttgaactgtacgatgtgactgaggacagtctg
agggtgcgatggaaccccgtgcccggagcgtccgggtacctgatcctctacgctcccctc
acggagggcctggccggggatgaaaaagagatgaagattggagagacccacacggacatt
gagctgggcgggttgttgcccaacacggaatacacagtcacagtgtatgctatgttcgga
gaggaagccagtgaccctgttacaggacaagaaacaacattacccttaagcccccccaga
aacctgagaatctccaacgtgggctccaacagtgctcgattagcctgggatgcaacatca
agaaggatcaatggttatcgaattgtgtataacaacgctgatgggactgaaatcaatgag
gttgaagtcgatcctgttactacgttccctctgaagggcttgacacccgtcaccgaatac
actgttgccattttctccatctatgatgaggggcagtcagaacctctgacgggaattttt
accacagaggacgttccggcccagcagtacttggaaattgacgaggtgacgacagacagt
ttcagagtgagctggcacccgctctcggcggatgaagggcagcacaagctgatgtggatc
ccagtctacgggggcaggaccgaagaagttgtcctacaggaagaccaagactcgtatgtt
attgacggcctggagcctggcactgagtatgaagtttccctgctggctctattggatgat
ggaagtgagagtgaggtggtgacggctgtcgggaccacacttgacagtttttggacagaa
ccccctacgactgaagaagcacctaccaggcctgtgacatcagttttccgcaccggaatc
agaaacctggtggtagatgatgagaccacttctagcctgcgggtagcatgggacatttca
gacagcagcgtgcagcagttcagggtgacctacctgactgctcaaggggacccagcggag
gaagtgctgggaacgattatggtgcctggaagccagaacactctccttctgaagaatctg
ctctctgagactgagtacaaggtcacggtgacgcccatctatgatgacggagaaggggtc
agtgtctctgcccctggaaaaaccttgcctccctctggtccccagaacttgcgggtctcg
gaagaatggtataacagattgcgcattacgtgggaccccccgtctgcccccgtgaagggc
tataggattgtctacaaacctgtcagtgttgctggcccgaccctggagacgttcgtggga
gctaacattaacaccatcgtcatcacaaacctgctcagcggaatggactacaacgtgaag
atattcgcttcccaggccgcgggcttcagcgacgctctgaccggcgtggtgaaaacactg
tttctgggtgtgaccgaccttcaggcggacgcggtgcagacgaccagcctgtgtgcccat
tggaaggtgcaacgtcatgccactgcctacagggtggtcctggaatcccgccaggataca
caaaagcaagaatccactttgggtggtgggacaaacaggcattgcttctatggacttcag
cctgattcggaatataagatcagtgtttacacaaagctccaggagatggagggacccagc
gtgagcgtaacgggaaaaacacaatcgcttcctactcaaccaccgacgttccctccaaca
atcccaccagcaaaagaagtgtgtaaagctgccaaagctgacctggtgtttatggtggat
ggatcctggagtattggtgatgaaaacttcaataagatcatcaacttcctgtatagcact
gtcggagccctgggcaagatcggcgcagatggaactcaagttgccatggttcagttcact
gatgaccccaggacagaatttaaactaaactcttacaaaaccaaagagactcttcttgat
gcaattaagcgtatctcatacaaagggggaaatacaaaaacaggaaaagcaattaagcat
gtccgagatagcttgtttactgcagagtcagggaccagaagaggcatcccgaaggtcatc
gtggttataactgatggaagatcacaagatgatgtgaacaaaatctccagagagatgcaa
tcagatggctacagcatttttgcagtcggcgtggccgatgcggattactcggagttggtt
agcattggcagtaagcccagtgcccggcatgtcttctttgtggatgacttcgacgccttt
aagaaaattgaagatgagctgattacttttgtctgtgaaaccgcatcagcaacctgccca
ctggtgcataaggatggcgttgatcttgcaggatttaagatgatggaaatgtttggtttg
gttgaaaaggagttttcatcagtggaaggggtctctatggagcctggtaccttcaatgtg
tatccttgttatcaacttcataaagatgccctggtttcccagccaaccaaatacttgcat
ccggacggattgccctctgactatacaatcagtattctattccggattcttcctgatact
ccagaggagccctttgctctttgggagattttaaataaaaattctgacccattggttgga
gtcattttagataatggtgggaaaaccctaacgtatttcaactatgactacagtggggat
tttcagactgttacttttgaaggacctgaaattaggaaaattttctatggaagctttcac
aagctacatattgttgtcagcaagactttggccaaagtggttattgactgcaagcacgtg
ggtgagaaggcaataaacgcgtcatctaatatcacgttggatggtgtcgaagtcctgggg
agaatggttcgatcaagaggaccaaatggaaactctgcaccgttccagttacagatgttt
gatattgtttgttccacatcatgggccaataaagacaaatgctgtgagcttcctgccctg
agggatgaggaggcctgcccagaactcccccacggctgctcctgttcggaaatcaacaaa
gcggctctggggccagcaggcccaccggggggcccaggactccgaggaccgaagggccag
cggggtgacccgggcctaaagggaccagacggccctcggggtgaaacgggccctccagga
cctcagggccccccgggaccccagggaccgagcggtctttccattcaagggatgcctgga
atgccaggtgaaaaaggagagaaaggagagaccgggctgccgggccctcagggtgtccca
ggaagcattggctcgccaggacgcgatggctccccaggccagaggggctttcctggaaag
gacgggtcctctggccccccgggtccaccagggccaattggcattcccggagcccctgga
gtccccggggtcacaggaagcatgggaccccaaggtgccctcggaccgcctggtgtccct
ggagcaaagggagagaggggagagaggggcgaccttcagtctcaagccatggtgagagcg
gtggcccgtcaggtgtgcgagcagctcatccagagtcacatggccaggtacacagccatc
ctcaaccagattcccagccactcgtcgtctgtgcggaccatccaggggcctcctggagag
cctgggaggccgggctccccgggaacccctggtgagcaaggaccccccggggccccaggc
ttccctggaaatgccggtgtgccgggctcgccgggagagcgaggtttcactggtgtgaag
ggagagaaaggaaacccaggcattggaactcaaggtcccagaggcccccctgggccagca
gggccttctggggagagtcggccaggaagcccagggccccctggttctcctggaccaagg
ggtccaccaggtcacctgggggtccctggaccacagggtccgtctggccagcctggatac
tgcgacccttcctcgtgttctgcctacggcgtgggagctccccatcctgaccagccagag
ttcacccctgtccaggatgagctggaggccatagagctgtggggctctgggatctga
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