Cervus canadensis (wapiti): 122451683
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Entry
122451683 CDS
T07554
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03013
Nucleocytoplasmic transport
ccad05014
Amyotrophic lateral sclerosis
ccad05200
Pathways in cancer
ccad05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122451683 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122451683 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
122451683 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122451683 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122451683 (TPR)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122451683 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
YwqH-like
Motif
Other DBs
NCBI-GeneID:
122451683
NCBI-ProteinID:
XP_043340535
LinkDB
All DBs
Position
13:12901870..12962903
Genome browser
AA seq
2436 aa
AA seq
DB search
MPSSGSVSRNRQRGRPMASRSFDGSRRGSLRRAGAREPPGEEVEAAAQASGSSGSSPFFS
VSAASTAAAAVPGPVDMAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHE
KFKVESEQQYFEIEKRLSHSQERLVNETRECQSLRLELEKLNSQLKALTEKNKELEVAQD
RSIAIQSQFTRTKEELEAEKRDLIRTNERLSQELEYLTEDFKRLNEKLKESNATKGELQL
KLDELQASDVSVKYREKRLEQEKELLHNQNTWLNTELKTKTDELLALGREKGNEILELKC
NLENKKEEVSRMEEQMNGLKASNENLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIK
LSNLYKSAADDSEAKSNELTRAVDQLHRLLKSTGEASKGFQEHIIEVEESKDRMEKEMLE
KIRKLEKELENANDLLSATKRKGAVLSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVE
TQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKE
IQRLQEDTDKANKHSSVLERDNQRMEVQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSA
DISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTSSKISELQAKLE
NALTELEQLRESRQHQMQLVDSIVRQRDMYRILLSQTTGVAIPLQASSLDDISLVSTPKR
SSTSQTASTPAPVIEPAEAIEAKAALKQLQEIFENYKKEKADNEKMQNEQLEKLQEQVTD
LRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMTQD
LRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGIL
ERSETETKQRLSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNL
HLNTKELLKNAQKEIATLKQHLSNMEVQLASQSSQRTGKGQPSNKEDMDDLLSQLRQAEE
QVNDLKERLKTSTSNVEQYRAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLEK
KLMEVEKEKQELQDDKRKAIESMEQQLSELKKTLNSVQNEVQEALQRASTALSNEQQARR
DCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETAQKAESQLLE
CKASWEERERMLKDEVSKSVSRCEDLEKQNRLLHDQIEKLSDKVVSSMKEGVQGPLNVSL
SEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAER
EKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDILP
LQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTK
RIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNKVRTEKENIQKELDAKIIDIQE
KVKTITQVKKIGRRYKTQYEELKAQQDKVMETSAQSSGDHQEQHISVQEMQELKETLSQA
ETKSKSLENQVENLQKTLSEKEVEARSLQEQTLELQSELARLRQDLQDRTTQEEQLRQQI
TEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQY
EGRISRLERELREHQERHLEQRDEPQEPTNKVPEQQRQITLKTTPASGERGIASMSDPPT
ANIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQ
EAMQSEGPVEHVPVFGSTSGSVRSTSPNVQPSIPQPILTVQQQTQATAFVQPTQQSHPQI
EPTNQELSPNIVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIEASDQI
SDDTVEMPLPKKLKSVTPVGTEEEVMAEESTDGEVETQVYTQDSQDSIGEGVTQGDYTPM
EDSEETSQSLQIDLGGLQSDQQTASSQDGQGKGDDVIVIDSDDEEEEEDENDGEHEDYEE
DEDDDEDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGGES
NQRAADSQNSGEGNTGTAESSFSQEISREQQPSSASERQTPRAPQSPRRPPHPLPPRLTI
HAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTD
GFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESG
GRSVPTTPLQVAAPVTVFTESTPSDASEHASQSVPMVTTSTGTLSTANETAAGDDGDEVF
VEAESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVR
LQTTLRQGVRGRQFNRQRGVSHAMGGRGGINRGNIN
NT seq
7311 nt
NT seq
+upstream
nt +downstream
nt
atgccctctagtggctcagtatctagaaaccgccaaagaggacgacccatggcatcccga
agctttgacgggtcccgccgcgggagtctccggcgggcgggcgcgcgcgagccaccgggt
gaggaggtcgaggcggccgcccaggcttctgggtcctctgggtcttcgcctttcttttcc
gtttctgccgcgtcgaccgctgctgccgcggtccccggcccagtcgacatggcggcggtg
ttgcagcaggtcctggagcgcacggagctgaacaagctgcccaagtccgtccagaacaaa
cttgagaagttccttgctgaccagcagtccgagatcgacggcctgaagggacggcacgag
aaatttaaggtggagagcgaacaacagtactttgagattgagaagagactgtcccacagt
caggagagacttgtgaatgaaacccgagagtgtcagagcttgcggcttgagctagagaag
ctcaacagtcaactgaaggcacttaccgagaaaaacaaggaacttgaagttgctcaggat
cgcagtattgccattcagagccagtttacacggacaaaggaagaattggaagctgagaaa
agagacttgattagaaccaatgagagactgtctcaagaacttgaatatttaacagaggat
tttaaacgtctaaatgaaaaacttaaggaaagcaatgcaacaaagggtgagcttcagtta
aaactggatgaacttcaagcttctgatgtttctgttaagtatcgagaaaagcgcttggag
caagaaaaggaattattacataatcagaatacttggctcaatacagagttgaaaaccaaa
actgatgaacttctggctctcggcagagaaaaaggaaatgaaattctagagcttaaatgt
aatcttgaaaacaaaaaagaggaggtttctagaatggaagaacagatgaatggcctgaaa
gcatcaaatgagaatcttcaaaagcatgtagaggatctgttgaccaaactgaaagaggcc
aaggaacagcaggctagtatggaagagaaatttcacaatgaattaaatgctcacataaaa
ctctctaacctttacaagagtgctgctgatgattcagaggcaaagagcaatgaactgacc
cgagcagtggaccagctacacaggcttttgaagtcaactggagaagccagtaaaggattt
caagaacatatcatagaggtggaagaatctaaagatcgaatggaaaaagaaatgcttgag
aaaataaggaaattagagaaggaattagagaatgcaaatgacctgctttctgccacaaaa
cgtaaaggggccgtcttgtcggaagaggagctggcagccatgtctcctactgcagcagct
gtagccaagatagtgaaacctggcatgaagctaactgagctgtataatgcttatgtggaa
actcaggatcagctgcttttggagaaactagaaaacaaaagaattaataagtatctagat
gaaatagtgaaagaagttgaagccaaagcaccaattttgaaacgccagcgtgaggagtat
gagcgtgcacagaaagctgtggcaagtttatccgttaagcttgaacaagctatgaaggag
attcagcgattgcaggaggacacagataaagccaataaacattcatctgtgcttgaaaga
gacaatcaaagaatggaagtacaaataaaagatctttcacaacagattagagtgcttctg
atggaacttgaagaagcgaggggtaaccatgtaatccgtgatgaggaagtaagctctgct
gatataagtagttcatctgaagtaatatcacagcatctggtatcttatagaaacattgaa
gagcttcaacagcaaaaccagcgtctcttagtggcccttcgggaacttggggaaaccaga
gaaagagaagaacaagaaacaacttcatccaaaatttctgagcttcaggccaaacttgag
aacgccctcactgaattggaacaactccgtgaatcacggcaacatcaaatgcagcttgtt
gattctatagttcgtcagcgtgatatgtaccgaattttgttgtcacagacaacgggagtt
gccattcctttgcaggcttcaagcttggatgatatttctcttgtgtcaactccaaaacgt
tcaagtacatcacagactgcttccactcctgctccagtaattgagccagcagaggctata
gaagctaaggctgcacttaaacagctgcaggaaatttttgagaactacaaaaaagaaaag
gcagataatgaaaaaatgcagaatgagcagcttgagaaacttcaggagcaagtcacagat
ttgcgatcacaaaacaccaaaatctctacccagctagattttgcttctaaacgttatgaa
atgcttcaagataatgtagaaggataccgtcgagaaataacatccctacatgagagaaat
cagaaactcactgcaacaactcagaagcaggaacagatcatcaacacaatgactcaggat
ttgagaggagctaacgaaaagctagctgttgcagaagtaagagcagaaaacctgaaaaaa
gaaaaggaaatgcttaaattgtcagaagtccgtctttctcagcaaagagaatctttgttg
gccgagcaaagagggcaaaacttactgcttactaatctgcaaacaattcagggaatatta
gagcgatctgaaacagaaaccaaacaaaggcttagtagccagatagaaaaattggagcat
gaaatatctcatctaaagaagaagttggagaatgaggtggaacagagacatacacttact
agaaatctggatgttcagcttttagatacaaagagacagctggatactgagacaaatctt
catcttaacacaaaagaactgttaaaaaatgctcaaaaggaaattgctacattgaaacag
cacctcagtaatatggaagtccaacttgcttctcagtcttcacagagaactggtaaaggt
cagcctagcaacaaagaagatatggatgaccttctgagccagctaaggcaggcagaagag
caggtgaatgacttgaaggaaagactcaaaacaagcactagtaatgtggaacagtatcgt
gcaatggttactagtttggaagaatccctcaacaaggaaaaacaggtgacagaagaagta
cgtaagaacattgaagttcgcttaaaagagtcagccgaatttcagacacagctggaaaag
aagttgatggaagtagagaaggaaaaacaggaacttcaggatgacaagagaaaagccata
gagagcatggaacaacagttatctgagttaaagaaaacactcaatagtgttcagaatgaa
gtacaagaagctcttcagagagcaagcacagctttgagtaatgaacagcaagccagacgg
gactgtcaggaacaagctaaaatagctgtggaagctcagaataagtatgagagagaattg
atgctacacgctgctgatgttgaagctctccaagctgccaaggaacaggtttccaaaatg
gcatcagtgcgtcagcatttggaagaaacagcccaaaaagcagaatcacagttgttggaa
tgtaaagcatcttgggaagagagagagagaatgttaaaggatgaagtttctaagagtgtg
tctcgctgtgaagatctagaaaaacaaaacaggttacttcatgatcagattgaaaaatta
agtgacaaagtcgtttcctcaatgaaggaaggtgtacaaggtccattgaatgtatctctc
agtgaagaaggaaaatcccaagaacaaattttagaaattctcagatttatacgacgagaa
aaagaaattgctgaaactagatttgaagtggctcaagttgagagcctgcgatatcgacaa
agggttgaacttttagaaagagagctgcaggaactgcaggatagcctaaatgctgaaagg
gagaaagttcaggtaactgcaaaaacaatggcccagcatgaggaactgatgaagaaaacc
gaaacaatgaacgtagtcatggagaccaataagatgctgagagaagagaaggagaggctg
gaacaggatctacagcagatgcaagccaaggtcaggaaactggagttagatattttaccc
ttacaagaagcaaatgctgagctgagtgagaaaagcggtatgttgcaagcagagaagaag
ttattagaagaagatgtaaaacgttggaaagcacgtaaccagcatctagtgagtcagcag
aaagatccagatacagaagaatatcgtaagctgctttctgaaaaggaagttcacactaag
cgtattcagcaattgactgaagaaattggaagacttaaagctgaaattgcaagatcaaat
gcatctttgactaacaaccagaacttaatccagagtctaaaggaagatttaaataaagta
agaacagaaaaggaaaatatccagaaggagttagatgccaaaataattgatattcaagaa
aaggttaaaactattactcaagtcaagaaaattggacgtaggtacaagactcagtatgaa
gaacttaaagcacaacaagataaggtcatggagacttcagctcagtcttctggagaccat
caggaacagcacatctcagtccaggaaatgcaggagctaaaagagaccctaagccaagca
gaaaccaagtcaaagtcactcgagaatcaagtggagaacctgcagaagactttgtctgag
aaagaggtagaagcaagaagtctccaggaacagactttggagcttcaatctgaacttgca
cgacttcgtcaggaccttcaagacagaaccacacaggaagaacaacttcgacagcagata
actgaaaaggaagaaaaaacaagaaaggccattgtagcagcaaaatcaaaaattgcacat
ttagctggtgtaaaagatcagctaactaaagaaaatgaagagcttaaacaaaggaatgga
gccttagatcagcagaaagatgaactggatgttcgtatgactgctcttaagtcccagtac
gaaggtcgaattagtcgcttggagagagaactcagggagcatcaagagagacaccttgaa
cagagagacgagcctcaggaacctaccaataaggtcccagaacagcagagacagatcacg
ttgaaaacaactccagcttctggtgaaagaggaattgccagcatgtcagacccaccaaca
gccaatatcaagccaacccctgttgtgtctacaccaagtaaagtgacagctgcagctatg
gctgggaataagtcaacacccagagctagtatccgcccaatggttacacctgcaactgtt
acaaatcctactactaccccgacagccacagtgatgcccactacacaagtggagtcacag
gaagctatgcagtcagaagggcctgtggaacatgttccagttttcggaagcacaagtgga
tctgttcgttctaccagtcctaacgtccagccttctatccctcaacccattttaacagtt
caacaacaaacacaggctacagcttttgtgcagcctactcaacagagtcatcctcagatt
gagcctacaaatcaagaactatccccaaacatagtggaggtggtgcagagttcgccagtt
gagcggccttctacttccacagcagtatttggcactgtttcagctaccccaagttcttct
ttgccgaagcgtacacgtgaagaggaagaagatagcaccatagaagcatcagaccagatc
tctgatgatacagtggaaatgcctcttccaaagaagctaaaaagtgttacacctgtagga
actgaggaagaagttatggcagaagaaagtactgatggagaggtagaaactcaagtatac
acccaggattctcaagattccattggagaaggagtcacccagggagattatacgccaatg
gaagacagtgaagaaacctctcaatctctacaaatagaccttggaggtcttcagtcagat
caacaaacagcttcatcccaagatggtcagggcaaaggagatgatgttattgtaattgac
agtgatgatgaagaggaggaggaggatgaaaatgatggggaacatgaggattatgaagaa
gatgaagacgacgatgaggatgatgaagatgacacagggatgggagatgagggtgaagat
agtaatgaaggaactggtagtgcagatggcaatgacggatatgaagctgatgatgctgag
ggtggtgacgggactgatccaggtacagaaacagaagaaagtatgggtggaggtgaaagt
aatcagagagcagctgattctcaaaacagtggtgaaggaaatactggtacagcagagtcc
tctttttcccaggagatatctagagaacagcagccatcatcagcatctgaaagacagacc
ccccgagcacctcagtcaccaagacgcccaccacacccgcttcccccaagactgaccatt
catgctccacctcaggagctggggccgccagttcagagaattcagatgactcgaaggcaa
tctgtaggacgtgggcttcagttgactccaggaataggtggcatgcagcagcattttttt
gatgacgaagatagaacagttccaagtaccccaactctcgtggtgccacatcgtactgat
ggatttgctgaagcaattcattccccacaggttgctggtgttcctagattccggtttgga
ccacctgaagatatgccacaaacaagttctagtcactctgatcttggccaacttgcttct
caaggaggtttgggaatgtatgaaacaccccttttcctagcacatgaagaggagtcgggc
ggccgaagtgttcctactactcctctacaagtagcagccccagtgaccgtatttaccgag
agcaccccctccgatgcctcagagcatgcttctcagtctgttccaatggtgacaacgtcc
actggcactttatccacagcaaacgaaacagcagcaggcgatgatggagatgaagtattt
gtggaggcagagtctgaaggtattagttcagaagcaggcctcgaaattgatagccagcag
gaagaagagcctgttcaggcctctgatgagtcagatcttccttccaccagccaggaccct
ccttccagttcttctgtagatactagcagtagtcagccgaagcctttcagacgggtaaga
cttcagacaacattgagacaaggtgtccgtggtcgccagtttaacagacagagaggtgtg
agccatgcaatgggagggagaggaggaataaatagaggaaatattaattaa
DBGET
integrated database retrieval system
