KEGG   Cervus canadensis (wapiti): 122451829
Entry
122451829         CDS       T07554                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122451829
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccad03041]
    122451829
   03400 DNA repair and recombination proteins [BR:ccad03400]
    122451829
Spliceosome [BR:ccad03041]
 Complex B
  Other components
   Prp19 complex
    122451829
 Complex C
   Prp19-CDC5 complex
    122451829
DNA repair and recombination proteins [BR:ccad03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    122451829
SSDB
Motif
Pfam: BCAS2 HAUS2 THOC7 Tup_N Transcrip_act OmpH Ribosomal_L29 INO80F Relaxase_C Beta-prop_NUP159_NUP214 DUF3450 PRKG1_interact
Other DBs
NCBI-GeneID: 122451829
NCBI-ProteinID: XP_043340739
LinkDB
Position
1:66547860..66548746
AA seq 225 aa
MAGTGLVAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSA
FETDIMRNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLRE
MESTWVSLVSKNYEIERTIVQLENELFQMKQQHGEANKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcgggcactggtttggtggctggggaggttgtggtggatgcgctgccgtattttgat
cagggttacgaagcgcctggtgttcgcgaagcggctgcggcgttggtggaggaggaaact
cgtagataccgacctacgaagaactatctaagctacctgacggccccagattattctgct
tttgagacagacataatgagaaatgaatttgaaagactggctgctcgacaaccaattgaa
ttgctcagtatgaaacgatatgaacttccagccccttcctccggtcaaaaaaatgacatc
actgcatggcaagagtgcgtaaacaattctatggcgcagttagagcatcaggcagtccga
attgagaatttggaactaatgtcccagcatggatgcaatgcctggaaagtgtataatgaa
aatctagttcatatgattgagcacgcacagaaagagcttcagaagttaaggaaacacatt
caagacttaaactggcaacgaaagaacatgcaactcacagctggatctaaattaagagaa
atggagtcaacctgggtatccctggtcagtaagaattatgagattgaaaggactattgta
caattagaaaatgagctctttcaaatgaagcagcaacacggagaggcaaacaaagaaaac
atacggcaggacttctga

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