Cervus canadensis (wapiti): 122451910
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Entry
122451910 CDS
T07554
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122451910 (SOX13)
Transcription factors [BR:
ccad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122451910 (SOX13)
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Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122451910
NCBI-ProteinID:
XP_043340951
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All DBs
Position
13:complement(74826275..74873142)
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AA seq
672 aa
AA seq
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MERAGAAPAAPPPPGWPPRFPGFLTGPRSWKQAPFLHPFLMMSMRSPGSAQLVLDEVGTM
VNCTVKAEGKKEPCYEAPRGSASADELQPGDPARPPKDGADQQAPAQGDRDVQSVLQDGS
PLENSESPEPRRPGGSEAASGSQERLDFNRNLKEVFWYLPVVPAIEKLLSSDWKEKFLGR
SSVETKDVKGTKESLAEKELQLLVMIHQLSALRDQLLTAHSEQKNMAAMLLEKQQQQMEL
ARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPLPVTPDSQLALP
IQPIPCKPVEYPLQLLHSPPAPVVKRPGALSAHHPLQEPSQPLNLTAKPKASELPNSSSS
PNLKLSNCGPRPPSHGAPTLDLQANPPSLPLGFLGEGDAVTKAIQDARQLLHSHSGALDA
SPSAPFRKDLIGVDTSPAKERLEDSCVHPLEEAMLGCDMDGSRHFPESRNSSHIKRPMNA
FMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLEKYPD
YKYKPRPKRTCIVEGKRLRVGEYKALMRTRRQDARQSYATPQQTGQVQTSPSEVLYPRVA
GLPLAQPLVEHYVPRGLDPNMPVIVNTCSLREEGEGPEDRHSVADGEMFRFSEDEDSEGE
EKSDGELVVLTD
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggaaagggcaggagcagcacctgcagcgccccctcctccaggctggcctccacgcttc
cctggattcctcactggtccccgttcctggaagcaagccccctttctccatccattcctc
atgatgtctatgaggagccccggctctgcccagctggtcctggatgaagttggcaccatg
gtgaactgtactgtcaaggcagagggcaagaaggagccttgttacgaggccccccgaggc
tcagcctctgcagatgaactgcagcctggagacccagcccgcccccccaaggatggtgct
gaccagcaagctccagcccagggtgacagggacgtccagtctgtcttgcaggacggcagc
cccctggagaacagtgagtccccagaacccaggagaccaggaggttccgaggctgcttct
ggaagccaggagaggctggacttcaacagaaatttaaaagaagtcttctggtatcttcca
gttgtgccggccatcgagaagctgctgtccagtgactggaaggagaagttcctgggaagg
agctctgtggaaaccaaagatgtcaaagggaccaaggagagcctggcagagaaggagctg
cagcttctggtcatgatccaccagctgtccgctctgcgggaccagctcctgactgcgcac
tcagagcagaagaacatggccgcgatgctcctggagaagcagcagcagcagatggagctg
gcccggcagcagcaggagcagattgctaagcagcagcaacagctgattcaacagcagcat
aagatcaacctccttcagcagcagatccagcaggtcaacatgccttacgtcatgattcca
gccttccccccaagccaccaacctctgcctgttacccccgactcccagctggctctgccc
attcagcccatcccctgcaagccagtggagtatccgctgcagctattgcacagccccccc
gccccagtggtgaagaggcctggggccttgtcagcccaccaccccctgcaggaaccctcc
caaccgctgaacctcacggccaagcccaaggcttcggagctgcctaattcctccagctcc
cccaacctgaagctgagcaactgtggaccacgtcccccaagccacggggcccccacgctg
gacctgcaggccaacccccctagcctgcccttgggcttcctcggtgaaggggacgctgtc
accaaagccatccaggatgcccggcagctgctgcacagccacagcggagccttagacgct
tcgcctagcgccccgttccgcaaggacctcattggcgtggacacatcaccagccaaggag
cggctggaggacagctgtgtgcatccgctggaagaagccatgctgggctgtgacatggac
ggctcccgccacttccctgagtcccggaacagcagtcacatcaagcggcccatgaacgcc
ttcatggtgtgggccaaggacgagagaaggaagatcctccaagctttcccagacatgcat
aactccagcatcagcaagatccttggctcccgctggaagtccatgagcaaccaggagaag
cagccttactatgaggagcaggccagactgagcaggcagcacctggagaagtaccccgac
tacaagtacaagccgcggcccaagcgcacctgcatcgtggagggcaagcggctgcgggtg
ggcgagtacaaggctctgatgaggacccggcgccaggatgcccgccagagctacgcgacc
ccccagcagaccggccaggtgcagacgagcccctcggaagtcctgtacccgcgggtggca
ggcctgcccctggcacagcccctggtggagcactacgtgccccgcggcctggacccaaac
atgcccgtcatcgtcaacacctgcagcctcagggaggagggcgagggcccggaggacagg
cactcggtggccgatggtgagatgttccggttcagcgaggacgaggactcggagggcgag
gagaagagcgacggcgagctggtggtgctcacggactga
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