Cervus canadensis (wapiti): 122451923
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Entry
122451923 CDS
T07554
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccad03036
]
122451923 (CHD5)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122451923 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
122451923
NCBI-ProteinID:
XP_043340991
LinkDB
All DBs
Position
13:complement(32431669..32499848)
Genome browser
AA seq
1954 aa
AA seq
DB search
MRGPLGTEEELPRLFTDEMENEDEMSEEEDGGLEVFDDFFPEEPVSLPKKKKPKKLKENR
SKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKKKDDEE
DDNEDGCLKEPKSSGQLMAEWGLDDVDYLFSEADYHTLTNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAISPQQAPQPVPIR
KAKTKEGKGPGVRKKIKGSKDAKKKGKGRKVTGLKFRFGGVGSKRKKGSSSEEDEREESD
FDSASIHSSSVRSECSAALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDT
CPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDDDEDEGGCEEEEDDHMEFCR
VCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEP
PAPFMVGLPGPDVDPGVPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYR
NYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNH
SFDKKGDVHYLIKWKDLPYDQCTWEIDEIDIPYYDSLKQAYWGHRELMLGEDARLPKRLV
KKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTD
TILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTY
TGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIE
WACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN
LEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY
KFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLV
KSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQ
EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN
KKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEEL
FKDDVEGMMSQGQRPATPIPDIQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDA
AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW
EKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDED
EDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWG
MPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHV
LTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPGEVISSDPNTPVPASPAHLLP
GPLGLPDKMEAPLGYMDEKEVGVQKPKKPPEIQALPTALDRVEGEDKQESSNGKERAREE
RLEEMEKAQPSPEQGPKEEVLPEKEKVLDKLELSLIHSRGDSSDFRPDDTKAEEKEPVET
QQNGDKEEDEEGKKEDRIGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRH
DYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQAL
VIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKV
LNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGSS
QMYNNNFGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcacggacgagatggag
aacgaggacgagatgtcagaagaagaagatggtggccttgaagtctttgatgactttttc
ccggaggagcctgtgagcctccccaagaagaaaaagcccaagaagctcaaggagaacagg
tccaaagggaagaggaagaagaaagaggggagcaatgacgagctgtcagaaaatgaagag
gatctggaagagaagtcagagagtgaaggtagtgactactccccgaataaaaagaagaag
aaaaaactcaaggacaagaaggagaaaaaagctaagcggaaaaagaaagacgatgaggag
gatgacaatgaagatgggtgcctcaaggagcccaagtcctcggggcagctcatggctgag
tggggcctggacgacgtggactacctgttctccgaggccgactaccacacgctgaccaac
tacaaggccttcagccagttcctcagaccgctcatcgccaagaagaacccgaagatcccc
atgtcaaagatgatgaccgtcctgggtgccaagtggcgggagttcagcgccaacaacccc
ttcaagggcagctcggcggcagcagctgcagcggcagtggccgcggccgtggagacggtc
accatcgcacctccgctggccatcagcccccagcaggcgccccagcctgtgcccatccgc
aaggccaagaccaaagagggcaaggggcctggagtgaggaagaagatcaaaggctccaag
gatgcaaagaaaaagggcaaagggagaaaggtgactgggctcaagttccgctttggaggg
gtcggcagcaagaggaagaaggggtcctcgagcgaggaggatgagcgagaggagtcggac
ttcgacagcgccagcatccacagctcctccgtgcgctccgagtgctctgctgctctgggg
aagaagagcaagaggaggcgcaagaagaagagaattgatgatggcgatggctacgagacg
gaccaccaggactactgtgaggtgtgccagcagggtggggagatcattctgtgtgacacc
tgcccgagggcctaccacctcgtctgtctggaccccgagctggagaaagctcctgagggc
aagtggagctgtccccactgtgagaaggaagggatccagtgggagccgaaggacgacgac
gacgacgaggacgagggcggctgcgaggaggaggaggacgaccacatggagttctgccgc
gtgtgcaaggacggaggcgagctgctctgctgcgacgcctgcccctcctcctaccacctg
cactgcctcaacccgccgcttcccgagatcccaaacggtgaatggctctgcccgcgctgt
acttgtcccccactgaagggcaaagtccagcggatcctgcactggcggtggacagagccc
ccagcccccttcatggtggggctgccggggcctgatgtggaccctggtgtacccccgccc
aagcccctggagggcatcccagagagagagttcttcgtcaagtgggctgggctctcttac
tggcactgctcctgggtgaaggagctccagctggagctctaccacacagtgatgtatcga
aactaccaaagaaagaacgacatggacgagccgccgccctttgactacggctctggcgac
gaggacggcaagagcgagaagaggaagaacaaggaccctctctatgccaagatggaggag
cgcttctaccgctacggcatcaagcccgagtggatgatgatccaccgcatcctgaaccac
agcttcgataaaaaaggggacgtgcattacctgatcaagtggaaagacctgccctacgac
cagtgcacctgggagattgacgaaattgacatcccctactacgacagcctgaagcaggcc
tactggggccacagggagctgatgctgggagaggacgccaggctgcccaagaggctggtc
aagaagggcaagaagctgaaggatgacaaacaggagaagcccccggacacacccattgtg
gatcccacggtcaagtttgacaaacagccatggtacatcgactccacgggcggcacgttg
cacccgtaccagctggagggccttaactggctgcgcttctcctgggcccagggaaccgac
accatcctggccgacgagatgggtctgggcaagactgtgcagaccatcgtctttctctac
tccctgtacaaggaggggcactccaaagggccctacctggtcagtgcacccctgtccacc
atcatcaactgggaacgtgagttcgagatgtgggcccctgacttctacgtggtcacctac
acgggggacaaggagagccgctccgtgatccgggagaacgagttttcctttgaggacaat
gccattcggagtggaaagaaggtgttccggatgaagaaagaagtgcagatcaaattccac
gtcctgctcacctcctatgagctcatcaccatcgaccaggccatcctgggctccatcgag
tgggcctgccttgtggtggacgaggcccaccggctcaagaacaaccagtccaagttcttt
agggtcttgaacagctacaagatcgattataagctgctgctgacagggaccccccttcag
aacaacctggaagaactgttccacctcctcaacttcctgactccagagaggttcaacaac
ctggagggcttcctggaggagtttgctgacatctccaaggaagaccagatcaagaagctg
cacgacctgctggggccgcacatgctgaggcggctcaaggctgatgtgttcaagaacatg
ccggcgaagactgagctgattgtccgcgtggagctgagccagatgcagaagaagtactac
aagttcatcctcacgcggaactttgaggcgctgaactccaaggggggtgggaaccaggtg
tcactgctcaacatcatgatggacctgaagaagtgctgcaaccacccctacctcttcccc
gtggctgctgtggaggcccccgtcctgcccaatggctcctatgacggcagctctctggtc
aagtcttcggggaagctcatgctgctacagaagatgctcaagaaactgcgggacgaaggg
caccgtgtgctcatcttctcccagatgaccaagatgctggacctcctggaggatttcctg
gagtatgagggctacaagtatgagcggattgacggtggcatcacggggggccttcggcaa
gaagcaattgacagattcaatgcccctggggcccagcagttctgcttcctcctctcgacc
cgggcaggtggcctggggatcaacctggccacggcagacacggtcatcatctacgactcg
gactggaacccgcacaatgacatccaggccttcagccgcgcccaccgcattgggcagaac
aagaaggtgatgatctaccgcttcgtgacgcgggcctcggtggaggagcgcatcacgcag
gtggccaagcgcaagatgatgctcacccacctggtggtgcgacctggcctgggctccaag
tccggctccatgaccaagcaggagctggatgacatcctcaagtttggcacggaggagctc
ttcaaggatgatgtggagggcatgatgtctcagggccagagacccgccacgcccatccct
gatatccagtcctccaaagggggagccttggcagccagcgccaagaaaaagcatggcagc
actcctccaggtgacaacaaggacgtggaggatagcagtgtgatccactatgacgatgcg
gccatctccaagctgctggaccggaaccaggatgccacggacgacacggagctccagaat
atgaatgaatacctgagctccttcaaggtggcgcagtatgtggtgcgcgaggaggatggc
gtggaggaggtggaacgggagatcatcaagcaggaggagaacgtggaccccgactactgg
gagaagctgctgcggcaccactacgagcagcagcaggaggacctggcccgcaacctgggc
aagggcaagcgcatccgcaagcaggtcaactacaacgacgcctcccaggaggaccaggag
tggcaggacgagctctcagacaaccagtctgaatattccattggctctgaggatgaggac
gaggactttgaggaaaggccggaagggcagagtggacggcgacaatccaggaggcagctg
aagagcgacagggacaagcccctgccccctcttctcgcccgggtcggcggaaacattgag
gtgctaggctttaacgcccgccagcggaaggcctttctgaacgccatcatgcgctggggc
atgcccccccaggatgccttcaactcccactggctggtgcgggaccttcgtgggaagagc
gagaaggagtttagagcctatgtgtccctcttcatgcggcacctgtgtgagccgggggct
gacggcgcggagacctttgcggacggcgtgccccgcgagggcctctccaggcagcacgtg
ctcacgcgcattggggtcatgtcactagttaggaagaaggttcaggagtttgagcacgtc
aacgggaagtacagcaccccggatctgatccccgaggggcctgagggcaagaagccaggc
gaagtcatctcctcggatcccaacacaccagtgcccgccagccctgcccacctcctgcct
ggccctctgggcctgccagacaaaatggaagccccactaggctacatggatgagaaggag
gtgggggtgcagaagccaaagaagcccccagaaatccaggccctgccaactgccctggac
agagtggagggagaggacaagcaggagagctccaatggcaaagagagggcccgagaggag
cggctggaggagatggagaaggcccagccctccccagagcaaggaccgaaagaagaagtg
cttcctgagaaggagaaggttctggacaagctggaactgagcttgattcacagcagaggc
gacagcagcgacttcaggccagatgacaccaaagccgaggagaaggagcctgttgagacc
cagcaaaatggtgacaaagaggaagatgaagaggggaagaaggaggacaggatcgggaag
ttcaaatttatgttcaacattgcagacgggggcttcacagagctacacacgctgtggcag
aatgaggagcgtgccgctgtgtcctcggggaaaatctatgacatctggcaccggcgccat
gactactggctgctggcgggcatcgtcacgcacggctacgcccgctggcaggacatccag
aacgacccgagatacatgatcctcaacgagcccttcaagtctgagatccacaagggcaac
tacctggagatgaagaacaagttcctggcccgcaggttcaagttgctggagcaggcgctg
gtcattgaggaacagctccggagggccgcatacctcaacatgacccaggaccccaaccat
cccgccatggccctcaacgcccgcctggccgaggtggagtgccttgccgagagccaccag
cacctgtccaaggagtcccttgccgggaacaagcctgccaatgctgtcctgcacaaggtc
ctgaaccagctggaggagctgctgagtgacatgaaggcggacgtgacgcgcctcccctcc
atgctgtcccgcatccccccggtggcagcccgcctccagatgtcggagcgcagcatcctg
agccgcctgaccaaccgagccggcgaccccaccatccagcagggcgctttcggctcctcc
cagatgtacaacaacaactttgggcccaacttccggggccctggaccgggagggattgtc
aactacaaccagatgcccctggggccctatgtgaccgatatctag
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