Cervus canadensis (wapiti): 122452008
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Entry
122452008 CDS
T07554
Symbol
NVL
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122452008 (NVL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccad03009
]
122452008 (NVL)
Ribosome biogenesis [BR:
ccad03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
122452008 (NVL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_22
AAA_14
TIP49
AAA_2
AAA_28
AAA_33
nSTAND3
NPHP3_N
Mg_chelatase
RNA_helicase
AAA_18
AAA_17
ABC_tran
NACHT
Zeta_toxin
AAA_3
nSTAND_NTPase5
IstB_IS21
TsaE
Viral_helicase1
NB-ARC
ATPase
Vps4_C
Rad17
AAA_19
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
122452008
NCBI-ProteinID:
XP_043341221
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All DBs
Position
13:51513645..51605748
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AA seq
860 aa
AA seq
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MKPRPARFVDNKLKQRVIQYLTSNRCGKYVDTGVLASDLQRMYSIDYGRRKRNAFRIQVE
KVFSIISSEKEHKDLADLEDEHLAKRARHGEEDNEYAESYSDDSSMEDYPDPQSANHMNS
SLLSLYRKGNPDSISSTPEMEQKETITSSPRITSRTGSVPSKTPAGGSEGGWFIDKTPGG
KKDSFFADLSDEKCNDKKLISEIENSKDSSLLESNKKRKGKLNSKGGKKKKEDLQEVDGE
IEAILQKKAKAKGLELQISSVKFEDVGGNDTTLKEVCKMLIHMRHPEVYHHLGVIPPRGV
LLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQAVSNAPCIL
FIDEIDAITPKREIASKDMERRIVAQLLTCMDELNNVAATARVLVIGATNRPDSLDPALR
RAGRFDREICLGIPDEASRERILQTLCRKLRLPETFHFRHLAHLTPGFVGADLMALCREA
AVCAVNRVLMELRERRGRRPETAASPSDGDQEERTGTEPTSETQLLSIQEELQRLLGLLR
NQDPLSEEQLKGLCIELNDFMVALSSVQPSAKREGFATVPNVTWADIGALEDIREELTMA
ILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYV
GESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSARETGASVRVVNQLLTEMDGLETRQ
QVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNL
EAIAGDLRCDCYTGADLSALVREASICALKQEMARQKSGSEKGELKVSQKHFEEAFKKVK
SSVSKEDRAMYKDLQWSLSR
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccaggcccgcgaggttcgtggataataaactgaagcagcgcgtcatccagtac
ctcaccagtaacagatgcggcaaatatgtggacactggtgtcttagcatctgatttacaa
agaatgtacagtatagactatggtcgaaggaaaagaaatgcctttaggattcaggtggaa
aaagtttttagcataattagcagtgagaaagaacataaggatctagcagacttagaagat
gaacatctggccaaaagagcaagacacggtgaagaggataatgagtatgctgaaagctat
tctgatgattcaagtatggaagattacccagacccacagtcagcaaatcatatgaacagt
tccctgctctccttgtatcggaaaggaaatcccgattctatttcaagtactcctgagatg
gaacaaaaagaaaccattacttcatcaccacggataacttccagaacaggctccgttcct
tcaaagacccctgccggaggttctgaaggaggatggtttattgacaaaaccccaggtgga
aagaaggacagttttttcgcggatctatcagatgagaagtgtaatgataagaagctgatc
tctgagatagagaattcaaaagattcttcacttctggagagtaacaaaaaaaggaaaggc
aagctaaacagcaaaggaggcaaaaagaagaaagaagatctccaggaagtagatggggaa
atagaagctatcctgcagaagaaagctaaagccaaggggctagaattacagatctccagt
gtgaagttcgaagacgttggcggcaatgatacaacattaaaagaggtctgcaagatgctt
atacacatgcgtcacccagaggtgtaccaccacctgggtgtcatacccccacgtggagtt
ctccttcatggaccaccaggctgtgggaagacgttacttgcacatgcgattgctggggaa
cttgatcttccaattctgaaagtagctgctacggagattgtatccggagtgtctggagaa
tccgaacagaagctaagagaactatttgaacaagctgtgtcaaatgcaccatgtatcctc
tttattgatgaaattgatgctattacccccaaaagagaaattgcttcaaaagatatggag
cgaagaattgtagcccagctcctaacctgcatggacgagctgaataacgtggctgctaca
gctcgggtcctagtcattggagctaccaaccgaccagactccttagaccctgctttgaga
cgtgcaggaaggttcgaccgagaaatatgcctaggtatcccggatgaagcatccagagaa
agaatacttcaaactttgtgcaggaaactgagacttcccgaaacctttcattttcgtcac
ttagcacacctcacgccgggcttcgttggcgctgacctgatggcgctctgccgagaggcg
gccgtgtgtgcagtcaacagggtcttgatggagctgcgggagcggcgtgggagacgtcct
gagactgcagcgtcaccctctgacggagaccaggaggaaaggactggaactgaacccact
tctgaaacccagctgctttctatacaggaagaattgcaaaggctgctggggttgctaagg
aaccaggatcccctctcagaggaacagcttaaaggactgtgcattgagttgaatgatttc
atggttgctctgtcctctgtccaaccctctgccaaaagggagggctttgccactgtccct
aatgtgacatgggcagatattggtgccctagaagacattagagaagagctcaccatggcg
atattggcaccagtacgtaacccagatcagttcaaagctcttggcttggtgactccagct
ggggtcctcctggctggtcctcctggctgtgggaaaactctgctcgcaaaggctgttgca
aatgagtctgggttaaattttatatctgtgaagggccctgaattactaaacatgtatgtt
ggtgagagtgagcgtgctgtgcgacaggtttttcagcgagccaagaactcagcaccctgt
gtgatattctttgatgaagtggatgcgttatgccctcgaagatcagcccgagagacaggg
gcaagtgtccgagtggtgaatcagctgcttacagagatggatggtctggaaacacgtcag
caagtttttattatggcagccactaacagaccagatatcattgatcctgcaatcctgcgc
ccaggccgcctggacaaaacactcttcgtgggtttaccacccccagcagatcgtctcgcc
atcctaaaaactatcacaaaaaatggtacaaaacccccactggatgcagatgtaaacttg
gaagcaattgctggtgaccttcgctgtgattgttatacaggtgcagatctctctgctttg
gtacgggaggcttctatctgtgccctgaagcaggaaatggcaagacagaagagtggaagt
gaaaaaggtgaactgaaggttagtcagaagcactttgaagaagctttcaagaaagtaaaa
tcatctgtatcaaaagaggatcgagcaatgtataaggatctgcagtggtccctcagccgg
tga
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