Cervus canadensis (wapiti): 122452109
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Entry
122452109 CDS
T07554
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122452109 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122452109 (SMG7)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
122452109 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
122452109 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
122452109
NCBI-ProteinID:
XP_043341427
LinkDB
All DBs
Position
13:complement(15658573..15736824)
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AA seq
1216 aa
AA seq
DB search
MRNWMFLQIVIVGENISFKSQMRTGNLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWT
SRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANL
SLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYIC
QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCR
SIAVKFPFPAASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSP
LREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQL
LALFMSFLGILCKCPLQNKSQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWP
WLISLLNSFHPHEEDLSSTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQ
RQIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQDTTI
IESLAADGNPGLKSVLSTGRNLSNNCDTGEKPVVTFKENIKPREVNRDQGRSFPPKEVRR
DCSKGVTVTKNDGKKDTTKRKTETKKCTLEKLQETGEQNVAVQVKSQTELRKTPVSEARK
TPVTQTPSQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSV
PGTFLQPTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPVTQGPQQPQPPSQQPLPPLPAPP
TAQTASQLQVQALAQQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQVQGPLG
KIMPVKQPYYLQTQDPIKLFEPSLQPPVRQQQPLEKTMKPFPMEPYNHTPSEVKIPEFYW
DSSYSAADNRAVMAQQASVDRRGKRSPGVFRPEQDPVPRMPFEDPKGSPLLPPDLLKSLA
ALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTGFSLNQ
ERYPNNSVFNEVYGKNLTTSSKAELNPSMAPQETSLYSLFEGTPWSPSLPASSDHSTPAS
QSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGFGIDYL
SAASSSESGWHQASTPSGSWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQ
QKQKQQRGQGTMNPPH
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattggatgttcttgcagatagtcattgtgggagaaaacatttcatttaagtcc
cagatgaggaccggaaacttgaaatcagaggagcatctgaaatcaagtaatattaggcag
gcagaagtcctgaaggctgacatgacagattctaagctgggtccagccgaagtctggaca
tccaggcaggctctgcaggacctgtaccagaaaatgctagttactgatttggaatacgct
ttagacaagaaagtagaacaggatctctggaatcatgcctttaagaatcagatcacaaca
ctacaaggccaggcaaagaatcgagcaaacccgaatcggagtgaagttcaggcaaacctt
tctctgttcctagaggcagctagtggcttctatactcagttattacaagaactgtgtaca
gtgtttaatgtagatttaccatgccgtgtgaagtcttcccagttgggaattatcagcaat
aaacagacgcataccagcgccatagtgaagccacagtctagctcctgttcctatatctgc
cagcactgcctcgttcaccttggagacattgctcgatacagaaaccagaccagccaggca
gagtcctactataggcatgcggctcagcttgtcccctctaatggtcagccttacaatcag
ttggctatcttagcttcttccaaaggagaccatctgactacaattttctactactgcaga
agcattgctgtgaagttccctttcccagctgcctctactaatctacaaaaagcactttct
aaagcactggaaagccgggatgaggtgaaaaccaaatggggtgtttctgacttcatcaag
gcctttattaaattccacggtcatgtgtacctgagtaagagcttggaaaagttgagccct
cttcgagagaagttggaagaacagtttaagaggctgctattccagaaagctttcaactct
cagcagttagttcacgtcactgtcattaacctgttccagcttcatcaccttcgtgacttt
agcaacgaaacagagcagcatagttacagccaagatgagcagctgtgttggacacagttg
ctggccctctttatgtcttttcttggcatcctgtgcaagtgtcctctccagaacaagtct
caggaggaatcctacaatgcctatcccctccctgccgtcaaggtgtccatggactggctg
agactcagacccagggtgtttcaggaggcagtggtggatgaaagacagtacatttggcca
tggctaatttctcttctgaacagtttccatccccatgaagaagatctttcaagtactaat
gcaacaccacttccagaggagtttgagttacaaggattcttggctttgagaccttctttc
aggaacttggatttttccaaaggtcatcagggtattacaggagacaaagagggtcagcaa
cgacaaatacgacagcagcgtttgatctctataggcaaatggattgcagataatcagcca
aggctgattcagtgtgaaaatgaggtagggaaattgttgtttatcacagaaatcccagag
ttaatactggaagaccccagtgaagccaaagagaacctcattctgcaagacacaaccatc
atagagtccctggctgctgatgggaatccaggactgaaatcagtgctgtctacaggccga
aatctaagcaacaactgtgacacaggagagaaaccagtggtcaccttcaaagagaacatt
aagccacgagaagtgaacagagaccaaggaagaagttttcctcccaaagaggtgagaagg
gactgtagcaaaggagtaactgtaactaagaatgatggaaagaaggacaccaccaagagg
aaaacagaaaccaagaaatgcaccttagaaaagttacaggaaacaggagagcagaatgtg
gcagtgcaggtaaaatctcagacagagttaagaaagactccagtgtctgaagccaggaaa
acacctgtaactcaaaccccaagtcaagcaagtaactcccagttcatccccattcatcac
cctggagccttccctcctcttcccagccggccagggttcccgcccccaacatatgttatc
ccccctcctgtggcattttctatgggctcaggttacaccttcccagctggtgtttctgtc
ccaggaacctttcttcagcctacagctcactctccagcaggaaaccaggtgcaagctggg
aaacagtcccacattccttacagccagcaacggccctccggaccagggccagtgacccag
ggacctcaacagcctcagccaccttcccagcagcccctcccacctctaccagctccgcca
acagcacagactgcaagccagctgcaggttcaagctctagctcagcagcaacagtcccct
acaaaagctgtgccggctttggggaaaagtccgcctcaccactctggattccagcagtat
caacaggcagatgcctccaaacagctgtggaatccccctcaggttcaaggcccattaggg
aaaatcatgcctgtgaaacagccctactaccttcaaacccaagaccccataaaactgttt
gagccgtcgttgcaaccgcctgtaaggcagcagcagcctctggagaaaacaatgaagcct
ttccccatggagccatataaccataccccctcagaagtcaagatcccggagttctactgg
gactcttcctacagcgcggccgataacagagctgtgatggcacagcaagccagtgtggac
cgcaggggcaaacggtccccgggagtcttccgtccagagcaggaccctgtgcccaggatg
ccatttgaggaccccaaaggctcccctctgcttcctccggacctgttaaagagtctggct
gccttggaggaagaggaagagctgattttttctaaccctcctgatctttacccagctctg
ctggggcctctcgcctctcttcctggacgaagcctctttaagtccttactggagaagccc
tcagagctcatgtcacattcatcctctttcctgtccctcaccggattctccctcaatcag
gaacgatacccaaataacagtgtgttcaatgaggtatacgggaaaaacctgacaaccagc
tccaaagcagaacttaatccctcaatggctccccaggaaacatcattgtactcccttttt
gaagggactccgtggtctccatctcttcctgccagttcagatcattcaacaccagccagc
cagtctcctcattcctccaacccaagcagcctgccaagctcccctccaacacacaaccac
aattctgtcccattctccaattttggacccattgggactccagataacagggataggaga
actgcagaccgctggaaaactgataagccagccatgggtgggtttggcatcgattatctc
tcagcagcatcatcctctgagagcggttggcatcaggccagcactccaagcggctcttgg
acaggccacggcccctccatggaggattcttctgctgtcctcatggaaagcctaaagtct
atctggtccagttccatgatgcatcctggaccttccgctttggagcagctgttaatgcag
cagaagcagaaacagcagcggggacaaggcaccatgaaccctccacactga
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integrated database retrieval system
