Cervus canadensis (wapiti): 122452597
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Entry
122452597 CDS
T07554
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04120
Ubiquitin mediated proteolysis
ccad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122452597 (UBE4B)
04120 Ubiquitin mediated proteolysis
122452597 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccad04121
]
122452597 (UBE4B)
Enzymes [BR:
ccad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122452597 (UBE4B)
Ubiquitin system [BR:
ccad04121
]
Ubiquitin ligases (E3)
U-box type E3
122452597 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DUF4568
Motif
Other DBs
NCBI-GeneID:
122452597
NCBI-ProteinID:
XP_043342322
LinkDB
All DBs
Position
13:36084888..36209547
Genome browser
AA seq
1360 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLGDKEPSSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFL
SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAATARSPD
RNLMLTTGSNPGTSPMFCNLGSFGASSLSSLYETSPAPNTSVWSSVPMMSPPLASPSRAA
SQATTPPASSLCPPGAAGTPAGSQPSSPRYRPYTITHPSGSTSSPASRSSGTSILSSSPG
LYAPASSPQAVPTSSSRQRPPGTGPPLLSASPGGSAPSRRPSSLRNSPSMYDSPFSFLFL
ALSGDSSDEDEEDDDDDGDDEGGGGGDEFSCVQFGSSLGASGGASTWDSYSDHFTIETCK
ETDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSL
QQPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDYFK
YPLMALGELCETKFGKTHPVCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAE
DDAKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYMA
AVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCRITLPN
DETRVNATMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRA
IRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRR
CLNFYGLLIQLLLRLLDPAYPDVTLPLNSDVPKVFAALPEFYVEDIAEFLFFIVQYSPQV
LYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLS
TKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQ
FVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERV
SRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPE
KYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIE
KFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHL
LNSPTDPFNRQTLTENMLEPVPELKEQIHAWMREKQNSDH
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgatgagatccgacggaggcgccttgcacgacttgctggtgga
cagacctcccagcctaccacccctctcacttctccccagcgagagaacccccccgggcct
cctatagcagcatcagctccaggcccctcccagagccttggtctcaacgtccacaacatg
acccccgctacctcccccattggtgcatcaggagtagcccatcgaagccagagcagtgag
ggagtcagttctctcagcagctcgccctccaatagccttgaaacgcagtcccagtctctc
tcacgttcccagagcatggatatcgatggagtctcttgtgagaaaagcatgtcccaggtg
gatgtggattcaggaatcgaaaatatggaggttgatgaaaatgaccgaagagaaaaaagg
agcctcggtgataaggagccttcatcaggttctgaagtgtctgaagagcaggccttacag
ctggtctgtaagattttccgtgtctcctggaaggaccgggacagggatgtgatcttcctt
tcttctctttctgcacagtttaagcagaacccaaaagaagtgttctctgattttaaggac
ttgattggccagattttaatggaagtgctaatgatgtcaactcagaccagagatgaaaac
ccatttgccagcctgacagccacctcccagccaattgcagcgacagctcggtcaccagac
agaaacctcatgctgaccaccggctccaacccaggaacgagccccatgttctgcaacctg
ggttccttcggggccagttctttgtctagcctctatgagactagcccagctcccaatacc
agtgtctggagctctgtgccaatgatgagtccgcctctggcctccccctcccgggcagcc
agccaggcgactacgcctcccgcttcttccctctgtcctcctggtgctgcggggacgcct
gcgggaagccagccctcgtctccgcggtaccggccctacactatcacccacccctcgggg
tctacatcttctcctgcctcgcgatcctcgggcacctccatcctgtctagctccccaggc
ttgtacgccccggccagtagccctcaagccgtgcccaccagctcctcccgacagaggccc
cctggcacaggaccacctttactctccgcctcccccggtgggagtgcccccagcagacgg
ccctcctccctaaggaactctcctagtatgtacgacagtcctttctccttcctcttcctc
gcactttctggggacagtagtgacgaagatgaagaagatgatgatgatgatggtgatgat
gaaggtggtggtggtggtgatgagttttcttgtgtccagtttgggtccagtctgggagcc
tctggtggggcaagtacttgggattcctacagcgaccatttcaccattgaaacgtgcaag
gagacagacatgctgaactacctcatcgagtgttttgaccgagttggaatagaggaaaaa
aaagcaccaaagatgtgcagccagccagcagtcagccagcttctgagcaacatccgctca
cagtgcatatcccacactgcattagtactccaggggtccctcacacagccaaggtccctg
cagcagccgtccttcctagtgccgtacatgttgtgtaggaacctaccatatggcttcatc
caggagctggtgagaaccactcaccaggatgaagaagtgttcaagcagatctttatcccc
attttacaaggcctggctcttgctgccaaagagtgctccctcgatagtgactactttaaa
taccccctcatggctttaggtgagctctgtgaaaccaagtttggaaagacacaccctgtg
tgcaatttggtcgcttctttgccgttgtggttgcctaagtctttaagccctggctctggg
cgggagctgcagagactctcatacttgggggctttcttcagcttctccgtctttgcagaa
gatgatgcaaaagtggtggaaaaatatttctcagggcccgccattaccctggaaaacact
cgagtggtgagccagtctctgcagcattacttggagctgggaaggcaagagctcttcaag
atcctgcatagtatcttgttaaatggggaaacccgtgaggccgctcttagttacatggca
gctgtcgtcaatgccaatatgaagaaagcacagatgcagacagacgataggttggtgtca
acggacggattcatgctgaatttcctttgggtactgcagcaacttagtacaaagatcaag
ttagagacagtcgaccccacgtacatattccacccaaggtgtcggatcacgcttcccaac
gacgagaccagagtgaatgcgacgatggaagatgtgaatgactggctgactgaactttat
ggagatcagcctccattttctgagccgaaattccctacggaatgcttctttctcaccctg
cacgcccaccacctctcaattctgcccagctgccgtcgctacatccgcagactgcgggcc
atccgggagctcaatagaactgtggaagatctgaaaaataatgaaagccaatggaaagac
tccccactggcaaccagacaccgtgagatgctgaaacgctgcaaaacccagcttaagaaa
ctggtacgatgcaaggcctgtgctgatgctggcttgcttgatgagagctttctgagaaga
tgtctgaacttctacggccttctcattcagctgctgctccgcctcctggaccctgcctac
ccggatgtaacactgcctttaaattcagatgtccccaaggtatttgcagcattgcctgag
ttttatgtagaagatattgctgaatttttattttttattgtacaatactctcctcaggtg
ctttacgagccctgcactcaggatattgtgatgttcctcgtcgtgatgttgtgtaaccag
aactacatccgaaatccgtatctggtggccaaactggtagaagtcatgttcatgaccaac
cctgctgttcagccaaggacccagaagttttttgaaatgatcgagaaccatcccctctcc
accaagttgttggtcccttccctgatgaagttttatacagacgttgagcacaccggcgcc
accagtgagttctatgacaagttcaccattcgctatcacatcagcaccatctttaaaagc
ctttggcagaacatagctcaccatggcacctttatggaggagttcaattctgggaagcag
tttgtccgctatataaacatgctgataaacgacacgacgttcttgctcgatgagagtctg
gagtctctgaagcggatccacgaagtgcaggaagagatgaagaacaaagaacagtgggac
cagctgccccgggatcagcagcaagctcgccagtcccagctcgctcaggatgagcgcgtt
tcacgctcctatcttgccctggcgacagagaccgtggacatgttccatatcctcaccaag
caggtccagaagccattcctgagacccgaacttggaccccgattggccgcgatgctgaac
ttcaatcttcagcaactctgtggcccgaagtgccgtgacctgaaagttgaaaaccccgag
aaatatggctttgaaccaaagaagctgttggaccaactgaccgatatttacttgcagctg
gactgtgcccggttcgcgaaagccatcgctgacgaccagagatcctacagcaaagagttg
tttgaagaagttatttcaaaaatgcggaaggcgggaatcaaatccaccatagcgatagag
aaatttaagcttctggccgagaaagtagaggagattgtggctaagaatgcacgtgcagaa
attgactacagtgacgccccagacgagttcagagaccctctaatggacaccctgatgact
gaccccgtgcgactgccctccggcaccatcatggaccgctccatcatcctgcggcacttg
ctgaactctcccacggaccccttcaaccgacagacgctgacggagaacatgctggaacca
gtgccagaactgaaagaacagattcacgcctggatgagagagaaacagaacagtgatcac
taa
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