Cervus canadensis (wapiti): 122453008
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Entry
122453008 CDS
T07554
Symbol
VLDLR
Name
(RefSeq) very low-density lipoprotein receptor
KO
K20053
very low-density lipoprotein receptor
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad05017
Spinocerebellar ataxia
ccad05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
122453008 (VLDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
122453008 (VLDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122453008 (VLDLR)
Membrane trafficking [BR:
ccad04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
122453008 (VLDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF
EGF_LRP2
hEGF
Motif
Other DBs
NCBI-GeneID:
122453008
NCBI-ProteinID:
XP_043342746
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All DBs
Position
14:30399927..30430910
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AA seq
845 aa
AA seq
DB search
MGTSARWALWLLLALCWAPRESGATGAGRKAKCEASQFQCTNGRCITLLWKCDGDEDCAD
GSDEKNCVKKTCAESDFVCNNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRTNEISC
GARSTQCIPVSWRCDGENDCDSGEDEENCGNITCSSDEFTCSSGRCISRNFMCNGQDDCS
DGSDELDCAPPTCGPHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQCGRQPVIHTRCP
ASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCDQKQDCRDWSDEPLKECHVNEC
LVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAA
QKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVA
TLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRALVTADIQ
WPNGITLDLIKGRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGLELATLVNNLNDAQDIIVYHELVQPSGKNWCEEDVENGGCEYLCL
PAPQINDHSPKYTCSCPNGYNLEDNGRECQRINVTTAVSEVSVPPKGTSAAWAILPLLLL
AMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKTTEEDLSIDIGRHSASVGHTYPAISVVST
DDDLA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctctggctgctgctcgcgctgtgctgggcgccccgg
gagagcggcgccaccggagccggaagaaaagccaaatgtgaagcctcgcagttccagtgc
acaaatggccgatgtatcacgctgctgtggaagtgtgatggggatgaggactgcgctgat
ggcagtgatgagaagaactgcgtgaagaagacgtgcgccgagtctgactttgtatgcaac
aatggccagtgtgttcctaatcgatggcagtgtgacggggatcccgactgtgaagatggt
tctgatgaaagcccagaacagtgccatatgagaacatgccgcacaaatgaaatcagctgt
ggcgcccgctccactcaatgtatccctgtgtcctggcggtgtgatggtgaaaatgattgt
gacagtggagaagatgaagaaaactgtggcaacataacgtgtagctctgatgagttcacc
tgctccagtggccgctgcatctccaggaatttcatgtgcaatggccaggatgactgcagt
gatggcagcgacgagctggactgcgccccaccaacctgcgggccccacgagttccagtgc
agcacctcctcctgcatccccatcagctgggtgtgcgacgatgacgcagactgctcggac
cagtcggatgagtccctggagcagtgcggccgccagccagtgatccacaccaggtgcccg
gccagcgagatccaatgtggctctggcgagtgcatccacaagaagtggcgatgcgacggg
gatcccgactgcaaggacggcagtgatgaggtcaactgtccttcccgaacctgccgacct
gaccagtttgagtgtgaggacggcagctgcatccatggcagcaggcaatgtaacggcatc
cgagactgcgtggacggttctgatgaagtcaactgcaagaacgtcaaccagtgcttgggt
cccgggaagttcaagtgcagaagtggggaatgcattgatatcagtaaagtgtgcgaccag
aagcaagactgcagggattggagtgacgagcccctgaaagaatgccatgtaaatgaatgc
ttggttaataatggcggatgctcccatatctgcaaagacctagttataggctatgaatgt
gactgtgcagctgggtttgaactcatagataggaaaacctgcggagatattgatgaatgc
caaaatccaggaatctgcagtcaaatttgtatcaacttaaaaggcggttacaagtgtgaa
tgtagtcgtggctatcaaatggatctcgccacgggcgtgtgcaaggcagtaggcaaagag
ccaagtctgatcttcaccaatagacgagacatcaggaagattggcttggagaggaaagaa
tatatccaactagttgaacagctgagaaacactgtggctctcgatgctgacattgccgct
cagaaactattctgggctgatctaagccaaaaagccatcttcagtgcctcaattgatgac
aaagttggtagacatgttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggactgacgcggcttctaagactatttcagtagct
accctagacggaaccaagaggaagttcctgtttaactctgacttgcgagaacctgcctcc
atagctgtggacccgttgtctggctttgtttactggtcagactggggtgaaccagctaaa
attgaaaaagcaggaatgaatgggtttgacagacgggcgctggtgacagcggacatccag
tggcctaatggaattacacttgaccttataaagggccgcctctattggctggattccaaa
ttgcacatgttatccagtgtggacttgaatggccaagatcgcaggatagtcctgaagtct
ctggaattcctagctcatcccctggcactcacaatatttgaggatcgtgtctactggata
gatggggaaaatgaagcagtctatggtgccaataaattcactggcttggagctggccact
ctagttaacaaccttaatgatgcccaggacatcattgtctatcacgaacttgtacaacca
tcaggtaaaaactggtgtgaagaagatgtggagaatggaggatgtgaatacctctgcctg
ccagccccacagattaatgaccactctcccaaatacacctgttcctgtcccaatggatac
aatctagaggacaatggccgagagtgccaaaggatcaatgtgaccacagcagtatcggag
gtcagtgttccccctaaagggacttctgctgcctgggccatccttcccctcttgctctta
gcaatggcagcagtaggtggctacttgatgtggcggaattggcaacataagaacatgaaa
agcatgaactttgacaatcctgtgtacttgaagaccactgaagaggacctatcaatagac
attggtagacacagtgcttctgttggacacacgtacccagcaatatcagttgtaagcaca
gatgatgatctagcctga
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