Cervus canadensis (wapiti): 122453200
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Entry
122453200 CDS
T07554
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122453200 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ccad04091
]
122453200 (FREM1)
Lectins [BR:
ccad04091
]
C-Type lectins
Lecticans
122453200 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
122453200
NCBI-ProteinID:
XP_043343028
LinkDB
All DBs
Position
14:complement(42063793..42234892)
Genome browser
AA seq
2180 aa
AA seq
DB search
MSSLSWAGLGALLLLLLLSGWASSTFVRVNQGVRVMKGSSAFLSQDDLKFTIPKEKDACK
VEVVMNEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDTVKLRLYRFTETDTFTE
TFILRVYLLEPDCNIIRMSDNALEVSEFYGLSRVIDKNLLRFDYERMASLECTVRLDPVG
TQLPAHGQLVLVEPQLEEPRGDQPHSFFPESQLGTELKCPGGRCTLGLKKVGSLKASCEE
FLLMGLRYQHLSSPSPNIDYISIQLDLTDSRSEITYKSERAWLPVYIRPGIPNQMPRAAF
MAMFILEVDQFILTSLTTSVLDCEEDETPKPLLVFNITKAPLQGYVTHLWDHTRPVSSFT
WKDLRDMQIAYQPPNSSHSERRLYEVELEVYDFFFEKSAPITVHISIRPADTNAPRVSWN
TGLNLLEGQSRAITWEQFQIVDNDDIHAVQVVTVDGLQRGRLTLRGGKGFLFTVADLQAG
VVRYHHDDSDSTKDFVVFRIFDSQHSIQHKFPINILPKDDSPPFLITNVVIELEEGQTIL
IQGSMLRASDMDSSDDYIFFNITKPPQAGEIMKKPAPGLIGYPVPGFIQRDLFNGVIYYR
HFGGEIFEDSFEFVLWDSHEPPNLSVPQVVTIHITPVDDQLPKEAPGVSRHLVVKETEVA
YITKKHLHFIDTESHDRELLYTITAPPFFSSSHRHLDAGKLFMVDSIPRLTKTPAAPGLK
YFTQHAVNHMKVAYMPPMQDVGPHPRHVQFAFSVSNQHGGTLYGICFNITILPVDNQAPK
VLTKPLRVAEGGQWVLSTEHVLVSDEDTKLDNIHLSLQSPPQHGMVELNGFPLNTGATFS
WGDLQALKLRYQHDGSEELQDDIVLQVTDGTNAAEYVLRIEVFPVNDELPVLKADLIPMM
RCSEGEEVVITSEYIFATDVDSDDLKLMFVIVGEPQHGTVRRAGVTVHQFSQEDVVAGAV
TYKHTGGEIGLMPCFDTITLVVSDREAGPFVNGCCYNGPHPSVPLHESFPVYDLNITVYP
VDNQPPSIAIGTIFVVDEGFSAALTVNHLSAADPDTAADDLEFVLVSPPQFGYLENTLPS
AGFEKSNMGISIASFQWKDMKALHINYVQSRHLGMEPTADKFMLYVTDGKRHSMEIPFYI
IINATNDEAPDFIVQNITVCEGQMRELDSSIISATDRDIPKNPLLFSITHKPHHGLLINR
AFSRNFFQYKQSANPDQKYELVYNFSMELLKNGMRLMYMHDDSESLADDFTIQVSDGKHK
ILKTIFVEVTPVNDEKPMLSKKAEITMNMGETRIISSAVLSAIDEDSPREKIYYLFERLP
QNGQLQLKIGRDWVPLYPGMKCTQEEVDLNLLRYTHTGAMDSKKQDSFTFHLWDGDHRSP
AFDCDITIKDMGKGDIVILAKPLVVSKGDRGFLTTTTLLAVDGTDKPEELLYVITSPPQF
GQVEYVRYPGVPITSFSQMDVAGQTVCYVDKSTTPVHRDMFRFIVSNGLQTKPGVFEITL
ETVDTALPVVTRNKGLRLVEGAMGLLSPDLLQLTDPDTPAEKLTFLLVQLPRHGQLYLRG
MALIPHNFTQLDVDSGHVAYQHLGGDSRTDHFTFMASDGTNNGFLVDGRVWQEPVSFTIQ
VDQLDKAAPRITHLHSPSQVGLLKNGCYGIYITSRVLKASDPDTDDNQIIFKILRGPQHG
HLENSMTGEFIHEKFSQKDLNSKTILYIINPSLEVNSDTMEFQVMDPTGNSATPQSLELK
WSHIEWSRTEYEVCENMGTLPLEITRRGYSMDSAFVSVQVNQVSATLGKDFTMTPSKLVQ
FDPGMSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKTAVKILDSKGGQCHPSY
AFNPNMPRAWEKGIWHLLSPGASSPTTSGSFHLERRPLPASKQLAVTRGDALQDFGSEDL
SPAKLRTQGDGKTVPPSSVYRNRTDSIYNYHGMISLKLEDDSSPTHRRKASVSIISEPQK
ATKVTEPPRADKEESTTGSHFPRQDPLPSFPKNCTLELKGLFHFEESLQKLYKCDGIAWR
SWSPHTKAVEDKSCPAGWHRHSGYCHSLITEQKGTWTTAAQACREHHQGSLVTVISRQHM
RWLWDISGRKPFWIGLNDQVRAGHWEWIGGEPVTFTNWRRGPPQRSKHGKDCVLVQRPGK
WHTKDCRKGKSHNYVCSRKL
NT seq
6543 nt
NT seq
+upstream
nt +downstream
nt
atgagctctctgagctgggctgggcttggtgccctgctcctgctgctgctgctctcaggc
tgggccagctccacctttgtccgtgttaaccaaggggtcagggtgatgaagggcagttct
gccttcctgtctcaagatgacctgaagttcaccatccccaaagagaaagatgcctgcaaa
gtggaagttgtgatgaatgagccaataacccagagggttgggaaactcactccacaggtc
tttgactgccatttccttcccaatgaagtaaaatatactcataacggttgcccaattctc
gatgaagacacagtgaagcttagactttacaggtttactgagacagacaccttcacggaa
acctttatcctgcgggtctacctcctggaaccagactgtaacatcatccgcatgagtgat
aatgcactggaggtgtctgagttctatggcctgtcccgagtcattgataagaacctgctc
agatttgattacgagaggatggccagcctggaatgcacagtcagactggaccctgtggga
actcagctgccagcccacggccagctggttctggtggagccccagctggaggaacctcgt
ggagatcagccacatagtttctttcctgagtctcaattgggaacagagctgaagtgtcca
gggggcaggtgtaccctgggactgaagaaagtcggaagtctcaaagcgagctgtgaggag
ttcctgctgatggggcttcgataccagcacctgagttccccttctcccaacattgattac
atctccatccaactggacctcacagatagcaggagtgaaatcacatacaagtcagagcgc
gcgtggctgcctgtttatatcagacctggaattcctaatcagatgccaagagctgcattc
atggccatgtttattctggaagtggatcagttcatcctgacctcattgactacatcggtt
ctggactgtgaagaggatgagacccccaaacccttgctggtgttcaacattactaaagcc
ccgctccagggctatgtgactcacctgtgggatcacaccagaccagtgtcctccttcacc
tggaaggatctaagagatatgcagattgcctatcagcctccaaacagcagccattctgag
aggagactttatgaggtggagttggaggtctatgacttcttctttgagaagagtgcacct
attaccgtccatatctccatcagaccagcagatacaaatgccccacgagtgtcctggaac
acaggtctgaatctcctggagggacagtctagggccatcacgtgggaacagtttcagatt
gtggacaatgatgacattcatgctgtgcaggtagtcaccgtggatggcttacagcgcgga
cggcttactctgagaggggggaagggatttctcttcactgtggctgaccttcaggctgga
gtcgttcgatatcatcatgatgacagtgactccaccaaagactttgtggtcttcaggata
tttgacagccaacacagcatccagcataagtttcccatcaacatcttgcccaaagatgac
agtccgccattcctcataacaaatgttgtgattgaactggaggaggggcagaccatacta
atccagggttccatgctgagagcttcagacatggactccagtgatgactacatcttcttt
aatatcacaaaacccccacaagctggagagatcatgaagaaaccagcgccagggctgata
ggctatccagtccctggcttcattcagagggatctattcaatggcgtcatttactatcgt
cactttggtggagaaatctttgaagattcatttgaatttgtcctgtgggacagccacgaa
cctccaaatctctcagtgccacaggtggtgacaatccatatcaccccagtagatgatcag
cttccaaaagaggctcctggagtttctcggcatttagttgtcaaggaaacggaggtggcc
tacatcactaagaaacatctacattttatagatacagaatcacatgaccgggagctgctc
tacacaataaccgctcctccatttttctcctccagccacagacacttagatgctgggaaa
ttattcatggtggacagcataccaaggctaaccaagactcctgcagctccagggttaaaa
tattttactcagcatgctgtgaaccatatgaaagtggcctatatgccacccatgcaagat
gtaggtccccatccaagacacgtccagtttgccttttctgtcagtaaccagcacggtggg
acgctatatgggatctgctttaacatcacgattcttccggtggacaatcaggccccaaag
gtgttgaccaaacctctgagagtggctgagggaggtcagtgggtcctcagcacagagcat
gtcctggtttctgacgaggacaccaaactggacaacatccacctctccttgcagagtccg
cctcagcatggaatggtggagctaaatggattcccgctaaacacgggggctacgttttcc
tggggagacctccaggccttaaaacttagatatcagcatgatggatctgaggaacttcag
gatgacatagtactgcaggtcacagatggcacaaatgcagctgaatatgttctacgcatt
gaggtgttccctgtaaatgatgagctaccagtgctaaaggcggacctcattcccatgatg
cgttgctccgagggtgaagaggtggtcatcacttctgaatacatttttgctactgatgtg
gacagcgatgatttgaagctgatgttcgtgattgttggagaacctcagcatgggactgtg
aggcgagctggggtcacggtacatcaattctctcaggaagatgttgtcgcaggggctgtg
acatacaaacacacaggtggtgagattggcctgatgccttgtttcgacaccattacattg
gtggtttcggacagagaagctggtccttttgtgaatggctgctgttacaatggacctcat
ccatctgttcctcttcatgagtcctttccagtgtatgatctcaacatcacagtgtatcca
gtggacaaccaaccaccttcaattgcaataggtaccatattcgttgtagatgagggtttc
tcagcagcccttaccgttaaccatttgtctgccgctgaccctgacactgcagcagatgac
ttggagtttgttttggtttctcctccccagtttggctaccttgaaaacacactcccttct
gcaggttttgaaaagagcaatatgggcatcagcatagcttcgtttcagtggaaagacatg
aaggctttacatattaactatgtgcagtccaggcatctggggatggaaccaacggctgac
aagtttatgttgtatgtcaccgatgggaagcgacactccatggagataccattttacatt
ataatcaacgctacaaatgatgaagctcctgattttatagtgcagaatattactgtgtgt
gagggtcagatgagagagctggattcttccatcatcagtgctactgaccgggacattccc
aagaaccccttgctcttcagtatcactcacaaaccacatcatggcctcctcatcaacagg
gcatttagcagaaacttttttcaatataagcaatcagccaaccctgaccagaagtatgaa
cttgtctacaacttttccatggaacttctcaagaatggaatgaggttgatgtacatgcat
gatgattcagagagtcttgctgatgactttacaatccaggtgtcagatgggaaacataaa
atacttaaaaccatttttgtagaggtcaccccagttaatgatgaaaaaccaatgctgagc
aagaaggctgaaattacaatgaacatgggtgaaactcgtattatttctagtgctgttctc
tcagccatagatgaagactcacccagggagaagatttactatttatttgaaagacttccc
caaaatgggcaacttcaacttaagatagggagggactgggtccctctgtaccctggcatg
aaatgcactcaggaagaagtggatttgaacttgctgagatatacacacaccggggccatg
gactccaagaagcaagacagcttcaccttccacctctgggatggtgaccataggtcaccg
gcctttgactgtgacatcaccatcaaggatatggggaaaggtgatattgtcatcctggca
aaacctcttgtggtgtctaagggtgacagaggtttcctgacgaccaccactctccttgct
gtggatggaacagacaagcctgaggaacttctctacgtcatcacctccccaccgcaattt
ggccaggttgagtacgtccgttatcctggggtccccattacaagcttcagccaaatggat
gtagcaggacagacagtctgctatgtagataagagcacgacacctgtccacagagacatg
ttcagattcatcgtcagcaatggacttcagaccaagcctggggtttttgagatcacactg
gagactgtggacactgccttacctgtggtgaccaggaacaaggggttgagactggttgaa
ggggccatgggcctgctctcccctgacctcctgcagctgactgaccctgacactccagcc
gagaagctcacctttcttctggtccagctcccacggcatggccagctctacctgcggggg
atggcgctgatcccacacaatttcactcagctggacgtggacagcgggcatgtggcctat
cagcacttgggaggggattctcggactgaccacttcacttttatggcctcagatgggaca
aacaatggctttcttgtggatgggagagtgtggcaagaacctgtatcattcaccatccag
gtggaccagttggacaaagcggccccccgcatcacacacttgcattccccttctcaagta
gggctcctgaaaaatggttgttacgggatttacatcacttcccgcgtgttgaaggcatca
gaccctgacactgatgacaatcagatcatctttaagattttacgaggcccccaacatggg
catctggagaactcaatgacaggtgaatttatccatgagaaatttagccaaaaggactta
aatagtaagaccattctttacatcataaacccatctttggaagtaaattcagataccatg
gaatttcaagtcatggatcccacagggaactctgccactccccaaagtttggaactgaag
tggtctcatattgaatggtcgaggactgaatatgaggtctgtgagaatatgggcacgttg
cccttggaaatcaccagaaggggatattccatggactcagcctttgtgagtgtacaggtc
aaccaagtgtcagctacacttggaaaggatttcaccatgactccatcgaagctggttcag
tttgacccaggaatgtcaactaagatgtggaatatagcaattacctatgacggattagag
gaagatgatgaggtctttgaagtaattctgaactcccctgtgaatgcggttcttggcaca
aagacaaaaactgcagtgaaaattttggactcaaaaggagggcagtgccatccttcatat
gccttcaatccaaacatgccccgtgcatgggagaagggcatttggcacctgctctcccca
ggggcttcctcacccaccacttctggttcctttcatctggaaagaagaccccttccagct
tctaagcagctagcagtcaccaggggtgatgccctgcaggactttggttctgaagatctt
tctccagcgaagcttaggacccaaggggatggcaaaacagtgcctccatcctctgtttat
agaaatagaacagacagcatctataactatcatgggatgatttccctgaaactggaggat
gacagctccccaactcacagacggaaggccagcgtatccattattagtgagccccaaaag
gcaaccaaagtgacagaaccgcctcgagccgataaggaggaatccacaaccggctcacac
ttccccagacaggacccattgccttcattcccaaagaactgcacactggaattaaaggga
ctcttccactttgaagaaagcctccaaaaactgtacaagtgcgatggaattgcctggaga
tcctggagcccccacaccaaggcagtggaagataaatcctgtccagctgggtggcaccgt
cattcaggctattgccactccttgatcacagagcagaaaggcacgtggactacagctgcc
caagcttgcagggaacatcaccagggcagccttgtaactgtcatctccaggcagcacatg
cgatggctttgggacatcagcggaagaaagcccttttggataggtttgaatgaccaagtg
cgtgctggccactgggagtggattggcggcgaacctgtgaccttcaccaactggaggaga
gggcccccgcaacgttcaaagcatggcaaagactgtgttttggttcaaaggccaggaaaa
tggcacacaaaggactgtagaaagggaaaatctcacaattatgtgtgctctaggaaactc
taa
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