Cervus canadensis (wapiti): 122453278
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Entry
122453278 CDS
T07554
Name
(RefSeq) LOW QUALITY PROTEIN: histone-binding protein RBBP4-like
KO
K10752
histone-binding protein RBBP4
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03082
ATP-dependent chromatin remodeling
ccad03083
Polycomb repressive complex
ccad04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122453278
03083 Polycomb repressive complex
122453278
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
122453278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccad03036
]
122453278
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
122453278
Histone modification proteins
HAT complexes
HATB complex
122453278
HDAC complexes
Sin3A-HDAC complex
122453278
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
122453278
PRC2.2
122453278
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
122453278
Heterochromatin formation proteins
Other heterochromatin formation proteins
122453278
Chromatin remodeling factors
NuRD complex
122453278
NuRF complex
122453278
NuRF complex (fruit fly)
122453278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_WDHD1_1st
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
122453278
NCBI-ProteinID:
XP_043343173
LinkDB
All DBs
Position
14:complement(25632558..25634007)
Genome browser
AA seq
432 aa
AA seq
DB search
MADREAAFDDIVEECVINEEYKIWKKNTPFLYHLVMTHALEWPSLTAQWLADVTRPEGKE
FSIHRLVLGTHMSDEQNHLVIASVQLPNDDAQFDASHYNSDNGEFGGFGLVSGKTEIEIK
INHEGEVNRACYMTQNPCIIATKTLSSDVLVFDYTKYPSKPDPSGEYNPDLHFCGHQKEG
YGLSWNPNLSGHLLSASDDHTIFLXDISAVPKEGKVVDVRTIFTEHTAVVEGISWHLLHE
SLFGSVADDQKLMIRGTPSNNMSKPSHSVDAHIAEVNCLSFSPYSEFILATDQLHRSADK
TVALWDLRNLKLKLHSFESHKDEIFQVQWLPHNETILASNDIDHRLNVCDLSKIGEEQSL
EDGPPESLFIHGGHTAKIADFFWNPKEPWVICCLSEDNIMQVWQMAENIYNDEDPEGSVN
PEGQGFRSCLHF
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggccgacagggaagcagcctttgatgacatagtagaagaatgtgtgatcaacgaagaa
tacaaaatatggaaaaagaacaccccttttctttaccatttggtgatgacccatgctcta
gagtggcctagcctaactgcacagtggcttgcagatgtaaccagaccagaagggaaagaa
ttcagtattcatcgacttgtcctggggacacacatgtcagatgaacagaaccaccttgtg
atagccagcgtgcagctccctaatgatgatgcacagtttgatgcttcacactacaacagt
gataatggagaatttggaggttttggcttggttagtggaaaaactgaaatagaaatcaag
atcaaccatgaaggagaggtaaacagggcatgctatatgacccagaacccttgcatcatt
gcaacaaagactctatccagtgatgttcttgtttttgactatacaaaatatccttctaaa
ccagacccttctggagagtacaacccagacttgcacttctgtggacatcagaaggaaggc
tatgggctttcttggaacccaaatctcagtgggcacttactgagtgcttcagatgaccac
accatcttcctgtgagacataagtgctgttccaaaggaagggaaagttgtggacgtgagg
accatctttacagagcacacagcagtagtagagggtatctcctggcatctgctccatgag
tccctctttgggtcagttgctgatgatcagaaactcatgatcaggggtactccttcaaac
aatatgtccaaaccaagccactcagttgatgctcacattgctgaagtgaactgcctttct
ttcagtccttatagtgagttcattcttgccacagatcagctccacagatcagctgacaaa
actgtggccctgtgggatctgagaaatctgaaacttaagttgcattcctttgaatcacat
aaggatgaaatattccaggttcagtggttgcctcacaatgagactattttggcttccaat
gatattgatcatagactgaatgtctgcgatttaagtaaaattggagaggaacaatcccta
gaggatgggccgccagagtcattgtttattcacggtggtcacactgccaagatagctgat
ttcttctggaatcccaaagaaccttgggtgatttgttgtctatcagaagataatatcatg
caagtgtggcaaatggcagagaatatttataatgatgaagaccctgaaggaagtgtgaat
ccagaaggacaaggatttagatcatgtctgcacttctga
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