Cervus canadensis (wapiti): 122453353
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Entry
122453353 CDS
T07554
Name
(RefSeq) LOW QUALITY PROTEIN: transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04137
Mitophagy - animal
ccad04141
Protein processing in endoplasmic reticulum
ccad05014
Amyotrophic lateral sclerosis
ccad05022
Pathways of neurodegeneration - multiple diseases
ccad05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122453353
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122453353
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
122453353
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122453353
05022 Pathways of neurodegeneration - multiple diseases
122453353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122453353
03009 Ribosome biogenesis [BR:
ccad03009
]
122453353
04131 Membrane trafficking [BR:
ccad04131
]
122453353
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccad04147
]
122453353
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122453353
Ribosome biogenesis [BR:
ccad03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
122453353
Membrane trafficking [BR:
ccad04131
]
SNARE
SNARE associated proteins
Others
122453353
Autophagy
Aggrephagy
Other aggrephagy associated proteins
122453353
Exosome [BR:
ccad04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122453353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
122453353
NCBI-ProteinID:
XP_043343279
LinkDB
All DBs
Position
14:14056054..14070311
Genome browser
AA seq
806 aa
AA seq
DB search
MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGSGGGTGGSVYTEDNDDDLYG
NT seq
2422 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggagctgattcaaaaggcgatgatttatcaacagccattcttaaacagaaa
aaccgtcccaatcggttaattgttgatgaagccatcaatgaggacaacagtgtggtatcc
ttgtcccagcccaagatggatgagctgcagttgttccgaggggacacagtgttgctgaaa
ggaaagaagaggcgggaagctgtgtgcattgtgctttctgatgacacatgttctgatgag
aagattcgaatgaatagagttgttcggaataaccttcgcgtacacctgggggatgtcatc
agcatccagccttgccctgatgtgaagtacggcaaacgcatccatgtactacccatcgat
gacacggttggaaggcatcactggcaatctctttgaggtttaccttaagccatactttct
ggaagcttatcgacccatccggaaaggagacattttccttgtccggggtggaatgcgtgc
cgtagagttcaaagtagtggagacagatcccagtccttactgcattgttgctccagacac
agtgatccactgtgaaggggaacctatcaaacgagaggatgaggaggagtccttgaatga
agtgggctatgatgacattggtggctgcaggaaacagttagctcagataaaggagatggt
ggagttgcccctgagacatcctgccctctttaaggccattggtgtgaagcctcctcgggg
aatcctgctctatggacctcctgggactgggaagaccttgattgctcgagctgtggcaaa
tgagactggcgccttcttctttttgatcaatggtcctgagatcatgagcaagttggctgg
tgagtccgagagcaaccttcgtaaagcctttgaagaggctgagaagaatgctcctgctat
cattttcattgatgagttggatgccattgctcccaaaagagaaaaaacccatggggaggt
ggagcggcgtattgtatcacagttgttgaccctcatggatggcctaaagcagagagcaca
tgtcattgttatggcagcaaccaacagacccaacagcattgacccagccctacggcgatt
tggtcgctttgacagagaggtggatattggaatccctgatgctacaggacgcttggaaat
tcttcagatccacaccaagaacatgaagctggcagatgatgtggaccttgaacaggtagc
caatgagactcatgggcacgtgggagctgacttagcagccctgtgctctgaggctgctct
gcaagccatccgcaagaagatggacctcattgacctagaagacgagaccattgatgctga
ggtcatgaactccctggcagttactatggatgacttccgatgggccctgagccagagcaa
cccatcagcactgcgggaaactgtggtagaggtgccacaggtgacctgggaggacattgg
gggcttggaggatgtcaaacgtgagcttcaggagctggtccagtatcctgtggagcaccc
agacaaattcctcaagtttggcatgacaccctccaagggagtactgttctatggacctcc
tggctgtgggaaaaccttgctggccaaagccattgctaatgagtgccaggccaacttcat
ctccatcaagggtcctgaactgctcaccatgtggtttggggagtctgaggccaatgtgag
ggaaatcttcgacaaggcacgccaagctgccccctgtgtactgttctttgatgagctgga
ttcgattgccaaggcccgtggtggcaacattggagatggtggtggggctgccgaccgagt
catcaaccagatcctgacagaaatggatggcatgtccacaaagaaaaatgtatttatcat
tggcgctaccaaccgacctgacatcattgatcctgccatcctgcgacctggccgccttga
tcagctcatctatatcccgcttcccgatgagaagtcccgtgttgcaatcctcaaggccaa
cctgcgcaagtccccagttgccaaggatgtggatttagagttcctggctaagatgactaa
tggcttctctggagctgacttgacagagatttgccaacgtgcttgcaagttggccattcg
tgaatcgatcgagagtgaaatcaggcgagaacgggagcggcagaccaacccatcagccat
ggaagtagaagaggatgatccagtgcctgagatccgccgagatcactttgaggaagccat
gcgctttgcccgccgttctgtcagtgataatgacatccggaaatacgaaatgtttgctca
gacccttcagcagagtcggggctttggcagcttcagattcccttcaggaaaccagggcgg
agctggccccagtcagggcagcggcggtggcacgggtggcagtgtgtacacggaagataa
cgatgacgacctgtatggctaa
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