Cervus canadensis (wapiti): 122453365
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Entry
122453365 CDS
T07554
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03082
ATP-dependent chromatin remodeling
ccad04714
Thermogenesis
ccad05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122453365 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
122453365 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
122453365 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccad03021
]
122453365 (SMARCA2)
03036 Chromosome and associated proteins [BR:
ccad03036
]
122453365 (SMARCA2)
Transcription machinery [BR:
ccad03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122453365 (SMARCA2)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
122453365 (SMARCA2)
Chromatin remodeling factors
BAF complex
122453365 (SMARCA2)
PBAF complex
122453365 (SMARCA2)
GBAF(ncBAF) complex
122453365 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
122453365
NCBI-ProteinID:
XP_043343293
LinkDB
All DBs
Position
14:29723890..29899168
Genome browser
AA seq
1572 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPSM
GSADFPQEGLHQMHKPMDGMHDKGVEDIHCGSMKGTAMRPPHPGMGPPQSPMDQHSQGYM
SPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGPLIPGDPQAMNQPSRGPSPFSPVQLHQ
LRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQPPPQPPPQPQPQQPQPQQQALVN
YNRPSGPGPELSGPSPPQKLPVPAPSGRPSPAPPAAAPPPAAAVPGPSVPQPAPGQPSPI
LQLQQKQSRISPVQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATV
ELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKI
EQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERI
EKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKK
RRRKKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLD
AWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQII
ETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSL
YNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPS
VVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKN
HHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFA
MTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILY
RHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNG
VINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDG
TTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQD
RAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQ
AILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEED
ELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEME
EEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYK
DRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN
HKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNE
EEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQDE
NEQSEASGTDDE
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccacagaccctggcgcgatgccccacccggggccttcgccagggccggga
ccctctcctggacccattcttgggcccagtccgggacctggaccatcccccggttccgtc
cacagtatgatggggccaagtcctgggcctcctagtgtctcacaccctatgccgtcgatg
gggtctgctgacttccctcaggaaggcctgcatcagatgcacaagcccatggatggtatg
cacgacaagggggttgaagatatccactgtggatccatgaaaggcactgctatgcgacca
cctcacccaggaatgggccctcctcagagtccgatggatcagcacagccaaggttacatg
tcgccacacccgtctccgctgggagcccccgagcatgtgtccagccctatatcaggaggc
ggcccgaccccaccacagatgccaccaagccagccaggacccctcatcccaggcgacccc
caggcgatgaaccaacccagcaggggtccctctcctttcagtccggtccagctgcatcag
ctccgagcccagattttagcttacaagatgctggcccgcggccagcccctccccgaaaca
ctgcagcttgcagtccaggggaaaaggacgttgcctggcatgcagcaacagccgccgcca
cagcccccaccccagcctcagccgcagcagcctcagccgcagcagcaggcccttgttaac
tacaacagaccatctggcccggggccagagctgagcggcccgagccccccgcagaagctg
ccggtgcccgcgcccagcggccggccctcacccgcgccccccgccgcagcgccaccgccc
gcggctgccgtgcccggaccctccgtaccgcagccggccccggggcagccctcgcccatc
ctccagctgcagcagaagcagagccggatcagcccggtccagaaaccccagggcctggac
cccgtggagattctgcaggagcgggagtacagactccaggctcgcatagcccataggata
caggagctggaaaatctgcctggctctttgccaccagacttacgaaccaaggcaaccgtg
gaactgaaagcacttcggttactcaatttccaacgtcagctgcgacaggaggtggtggcc
tgcatgcgacgggacacgaccctggagacggccctcaactccaaggcgtacaagcggagc
aagcgccagaccctgagggaagcccgcatgacggagaagctggagaagcagcagaagatc
gagcaggagcggaagcgaaggcagaagcaccaggaatacctgaacagtattttgcaacat
gcaaaagactttaaggagtatcatcggtctgtggctggcaagatccagaagctttccaaa
gcagtggccacctggcatgccaacacggaacgggagcagaaaaaagagacggagcggatt
gagaaggagaggatgcggaggctgatggctgaagatgaagagggctatagaaaactgatc
gatcaaaagaaagacaggcgtttagcatacctcttgcagcagactgatgagtatgtggcc
aacctgactaacctggtttgggagcacaagcaagcccaggcggccaaagagaagaagaag
agaaggaggaagaagaagaaggctgaagagaacgctgaaggaggagagtctgccctggga
ccggacggagagcccatagatgagagcagccagatgagtgacctccccgtcaaagtgact
cacacagaaactggcaaggtcctgtttggcccagaagcacccaaagcaagtcagctggac
gcctggttggaaatgaatcctggttacgaagttgcccctagatcggacagtgaagagagt
gattctgattatgaggaagaggatgaggaggaagagtccagcaggcaggagactgaagag
aaaatacttctggatccaaacagtgaggaggtttcggagaaggacgccaagcagatcatt
gagacggcgaagcaagacgtggacgacgagtacagcatgcagtacagtgccagaggctcc
cagtcctactacacggtggcccacgccatctccgagagggtggagaagcagtcagccctc
ctcattaacggaaccctgaagcattatcagctccagggcctggaatggatggtttctctg
tataataacaatttgaacggaatcttagctgatgaaatggggctgggaaagaccatacag
accattgcactcatcacttatctgatggagcacaaacgactcaatggcccctatctcatc
attgttcccctttcgactctgtctaactggacatatgaatttgacaaatgggctccttct
gtggtgaaaatttcttacaagggcacccctgccatgcgtcgctctcttgtcccccagcta
cggagtggcaaattcaacgtcctcctgactacttatgagtacattataaaagacaagcac
attcttgcaaagatccggtggaaatacatgatagtggacgaaggccaccggatgaagaat
caccactgcaagctgactcaggtcctcaacacgcactacgtggcccccagaaggatcctc
ctgaccgggaccccactgcagaacaagctcccggaactctgggccctcctcaacttcctc
ctccccaccatttttaagagctgcagcacattcgagcagtggtttaatgcaccatttgcc
atgactggagagagggtggacttaaatgaagaagaaactatattgatcatcaggcgtctg
cataaggtgttgagacccttcttactgaggagactgaagaaagaagttgaatctcagctt
ccagaaaaggttgagtatgtgatcaagtgtgacatgtcagctctgcagaagattctgtat
cgccacatgcaagccaaagggatcctcctcacagatggttcagagaaagataagaagggg
aaaggaggtgctaagacactaatgaacactatcatgcagttgagaaagatctgcaatcac
ccatatatgtttcagcacattgaggaatcctttgctgaacacctgggctattcaaatggg
gtcatcaatggggctgagctgtatcgggcctcgggaaagtttgagctacttgatcgtatt
ctgccaaaattgagagcgactaaccaccgcgtgctgcttttctgccagatgacgtccctc
atgaccatcatggaggattactttgcttttcggaacttcctttatctgcgccttgatggc
accaccaagtctgaagatcgtgctgctttgctaaagaaattcaacgaacctgggtcccag
tatttcattttcttgctgagtacaagagctggaggcctgggcttgaatctccaggctgct
gatactgtggtcatcttcgacagcgactggaatcctcatcaggacctgcaggcgcaggac
cgcgctcaccgcattggccagcaaaacgaggtccgcgtgctgaggctctgcaccgtcaac
agcgtggaggagaagatcctcgccgccgccaagtacaagctgaatgtggatcagaaggtg
atccaggcgggcatgtttgatcagaagtcttccagccacgagcggagggccttcctgcag
gccatactggagcacgaagaggaaaatgaggaagaagatgaagtgcccgacgatgagact
ctgaaccaaatgattgctcgacgagaggaggaatttgatctttttatgcgcatggacatg
gaccggcggagagaggatgcccggaacccgaaacgcaagccccgcctgatggaggaagac
gagctgccctcgtggattattaaagatgacgccgaggtggaacggctgacatgtgaagag
gaggaggagaagatcttcgggagggggtcccgccagcgccgggacgtggactacagcgat
gccctcacggagaagcagtggctgagggccattgaagacggcaatttggaagaaatggaa
gaggaagtccggcttaagaagcgaaaaagacgaagaaacgtggataaggatcctgcaaaa
gaagatgtggagaaggccaagaagaggagaggtcgccctccagctgagaagctgtcacca
aatccccctaaactgacgaagcagatgaatgctatcattgacactgtgataaactacaaa
gacaggtgtaacgtggagaaggtgcccagtaattctcagttggaaatagaaggaaacagt
tcagggagacagctcagtgaggtcttcattcagttaccgtcaagaaaagaattgccagaa
tattatgaattaatcaggaaaccagtggatttcaaaaaaataaaggaaagaattcgtaat
cataagtaccggagcctgggtgacctggagaaagacgtcatgctcctctgtcacaatgct
cagacattcaacttggagggatcccagatctatgaagactccatcgtcttacagtcagta
tttaagagcgctcggcagaaaattgccaaagaggaagagagtgaggacgaaagcaatgaa
gaggaggaagaggaagatgaagaagagtcggagtcagaggcaaaatctgttaaggtgaaa
atcaagctcaataaaaaggatgagaaaggccgggacaaaggaaaaggcaagaaaaggcca
aatcgaggaaaagccaagcctgtggtgagcgattttgacagtgatgaagagcaggatgaa
aatgaacaatcagaagccagtgggactgatgatgagtga
DBGET
integrated database retrieval system
