Cervus canadensis (wapiti): 122453565
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Entry
122453565 CDS
T07554
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccad03400
]
122453565 (PMS1)
DNA repair and recombination proteins [BR:
ccad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122453565 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
DUF4452
Motif
Other DBs
NCBI-GeneID:
122453565
NCBI-ProteinID:
XP_043343484
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All DBs
Position
15:67761294..67867231
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AA seq
931 aa
AA seq
DB search
MKQLPPATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEG
IKAIDAPVMAVKYYTSKISSHEDLENLTTYGFRGEALGSICCIAEVSITTKTAADNFSTQ
YVLDGGGHIVSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLISYG
ILKPDVRIVFIHNKAIIWQKTRVSDHKMALMSVLGTAVMGNMESFQYHCEESQIFLSGFL
PKHDADHSCTSLSTPERSFIFINSRPVHQKDILKLIRHYYNLKCLKESTRLYPIFFLKID
VPTADVDVNLTPDKSQVLLQNKESVLTALENLMTTCYGSLPSTNSYESNKTDVSSADMVV
SKTTETDVLLTEMETSGNNYPNVDTSAIPFQNDVRNDKFGENTDYCLNRQVHIGDHYDDH
FNSENSSIDKSDGNTFKEIPKNNSSCEDTQEEYSETCSVDSVEQAQSANGSKGHRDESGK
KEEAAVPEKSLEICVDDWSKGNMLNSRGENIEPVKILVPQKSLVSNVSSNNSNTSPEQKN
LCESSCNKKSNVVDNKSGQLTAYDLISNRVIRKPMSASALFVQDCRAQILTDNPKTSLED
AALQSEELWKTLSEEEKLKYEEKATKDLERYNKQSQRAIEQESQVLKDGKKRMKPTSVWH
LAQKHKLKTSLSNQPKLDELFQAQIEKKKNQNIKIVQVSFSMENLKKNFDTQKKFDLEEK
DEFCLIHNLKFPDAWLITSKTEIMLLNPYRVEEALLFKRLLENHKLPAEPLEKPIILTES
LFNGSHYLEILQKMTAGDQRYSGPIYLSDPRLTANGFKIKLTPGVSIAENYLEIEGMANC
LPFYGVMDLKEILNAILNKNAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDIRDII
YRMKHQFRNEIKGCVHGRPFFHHLTHLPEAT
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttgcctccagcaacagttcgcctactttcaagctctcaaataatcacttca
gtggtcagtgtggtaaaagagctcattgaaaactccttggatgccggtgccacaagcata
gatgttaaactggaaaactatggatttgataaaattgaggtgcgagacaatggtgagggt
atcaaggctatagatgcacctgtaatggcagtgaagtactacacctcaaaaataagtagt
catgaagatcttgaaaatttgacaacgtatggttttcgtggagaagccttggggtcaatt
tgttgtatcgctgaggtttcaattacaacaaagacagctgctgataactttagcacccag
tatgtgttagatggtggtggtcacatagtttctcagaaaccttcacatcttggtcaaggt
accactgtaactgctttacgattatttaagaatctacctgtaagaaagcaattttactca
actgctaaaaaatgtaaagatgaaataaaaaagatccaagatctccttataagctatggt
atacttaaacctgatgtaaggattgtttttatacataacaaggcaattatttggcagaaa
actagagtatcagatcataaaatggctctcatgtctgttctggggactgctgttatgggc
aatatggaatcctttcagtaccactgtgaagaatctcagattttcctaagtggatttctt
ccaaagcatgatgcagaccactcttgcacaagtctttcaaccccagaaaggagtttcatc
tttataaacagtcgaccagtacaccaaaaagatatattgaagctaatccgacattattac
aatctgaaatgtctaaaggaatctactcgtttgtatcccattttctttctgaaaattgac
gttccaacagctgatgtagatgtgaatttaacacctgataaaagtcaagtattgttacag
aataaggaatctgttttaaccgctcttgaaaatctgatgacgacttgttatggatcacta
cctagtacaaattcttatgaaagtaataaaacagatgtttcctcagctgacatggttgtt
agtaaaacaacagaaacagatgtgcttcttactgagatggaaacatctggaaataattat
ccaaatgttgatacttcagccattcctttccaaaatgatgtgcgtaatgataaatttggg
gaaaacactgattattgtttaaatcgtcaggtacatattggtgaccattatgatgatcat
tttaatagtgaaaattctagcattgataagagtgatggaaatacatttaaagaaatccca
aagaataattcatcttgtgaggacacccaagaggagtatagtgaaacttgttctgtggat
tctgttgagcaagcccaatcagcaaatggcagtaaaggccatagagatgagagtgggaaa
aaggaagaagcagcagttcctgagaagtctttggaaatttgtgtagatgactggagcaag
ggaaatatgcttaattctagaggagaaaacattgaacctgtgaaaattttagtgcctcaa
aaaagtttagtgagtaatgtaagtagtaataatagtaatacaagtcctgaacaaaagaat
ctctgtgaaagttcctgtaacaaaaaatcaaacgtggtagataacaaatctggacagctt
acagcttatgatttaattagcaatcgagtaatcaggaagcccatgtcagcaagtgccctt
tttgttcaagattgtcgtgcccagattctcacagacaatcccaagaccagcttggaagat
gcagcattgcaaagtgaagaactgtggaagacattgagtgaagaggaaaaactgaaatat
gaagagaaagctactaaagacttggaaagatacaataagcaaagccagagagccattgaa
caggagtcacaagtattaaaagatggcaaaaaaaggatgaaacccaccagtgtttggcat
ttggcacagaagcacaagttgaaaacttcgctatcgaaccagccaaaacttgatgagctc
tttcaggcccaaattgaaaaaaaaaagaaccaaaacattaaaatagttcaggtctccttc
tctatggaaaacttaaaaaagaattttgatacacagaagaaatttgacttagaagaaaag
gatgaattttgcttgatccacaatctcaagtttcctgatgcatggctaattacatccaaa
acagagataatgttgttaaatccatacagagtggaagaagctctgctatttaaaagactt
cttgagaatcacaaacttcctgcagagccactggaaaaaccaattatattaacagagagt
ctttttaatggatcccattatttagagattttacagaaaatgacagcaggtgaccagaga
tacagtggaccaatttacctgtccgatcctcgtcttacagcaaatggtttcaagataaaa
ttgacaccaggagtttccattgctgaaaactacttggaaatagaaggaatggctaattgc
cttccattctatggagtgatggatttaaaagaaatccttaatgctatattaaacaaaaat
gcaaaggaagtttatgaatgtagacctcgcaaagtgataagttatttagagggagaagca
gtacgtctgtctagacaattacccatgtacttatcaaaagaggacatccgagatattatc
tacagaatgaagcaccagtttagaaatgaaattaaagggtgtgttcatggtcgcccattt
tttcatcatttaacccatcttccagaagctacataa
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