Cervus canadensis (wapiti): 122453791
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Entry
122453791 CDS
T07554
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
KO
K11138
telomere-associated protein RIF1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
122453791 (RIF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccad03032
]
122453791 (RIF1)
DNA replication proteins [BR:
ccad03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
122453791 (RIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rif1_N
NICE-1
Motif
Other DBs
NCBI-GeneID:
122453791
NCBI-ProteinID:
XP_043343910
LinkDB
All DBs
Position
15:32328172..32387357
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AA seq
2464 aa
AA seq
DB search
MTAADQSPLAPLLETLEDPSASVGEQTDAYLTLTSRMTGEDGKEIIAEIEKKLPQLFKVL
ETHIASQNSELSSAALQALGFCLYNPKIASGLSEIDIQELLSKLNDIVKSSDKNVRTRAL
WVISKQTFPTEVVGKVVSSIIDSLEIVFNRGEMHSAVVDYEALNVIIRLIEQAPVQMGEE
SVRWAKLVIPLVVHSAQKVHLRGASALEMGMPLLLQKQQEIASITEQLMTTKLLSELQKL
FMSKNETYVLKLWPLFVKLLGKTLHRSGSFINSLLQLEELGFRSGAPMIKKIAFIAWKSL
IDNFALNPEILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPHLPANFEQV
CVPLIQSTISIDSNVSPQGSSSRVATTPGLNPMTPVHKGASPYGTPVTPRMNLNSNFGMA
TIPSIQLLGLEMLLHFLLGPEVVSFAKQNKLILSLEPLEHPLISSSSFFSKHSNTLITAV
HDSFVAVGKDASDVVINAIWKELISLVKSVIESGNKKERPGSEVLTLLLKSLESIVNSEV
FPVLKTLVLMEITIKGLPQKVLGSPAYQVANMDILNGTPALFLIQLIFNNNLLECGVEDE
RFFLNLETLVGCVLSGPTSPLAFSDSVLNVINQNAKQLDNKEHLWRMWSIIVTPLTELIN
QTNEVNQGDALEHNFSAIYGALILPINHIFPAQKIPVVTMKTLLKTWSELYRAFARCAAL
VATAEENLCCEELSSKIMSSLEDEGLSNLLFLDRITHIITVMVDCIDFSPYNIKYQPKTK
SPQRPSDWSKKKKEPLGKLASLFKLIVRVIYSFHTLSLKEVHSDTLLTIGNSITSILSSV
LGRISLPSMIRKIFAALTRPLALFYENSKFDEVPKVYSCMNNKLEKLLGEIIACLHVSYT
GTYDNELLEQISPLLCIIFSHKNKQIRKQSAQFWNATFAKVTMLIYPEELKPILKQAKQK
SLLLLPGLENVEIMEESSGLYSDTTENSQLNMKISGMERKSSGKRDSFLAAQTKDTKDSV
KPPAKLKLESSTPKSEMPLEEEKSTDFVFIPPEGKETKERILTEHQKEVLKTKRCDIPAM
YNNLDVSQDTLFSQYSQEESTEISTSIEKSKDSKMIFKEEQKENDVVVPQHVMENCGMDE
HLEKASLLNNECGSIEETSPKILSSNNDTRKKALIASKKPTEYASTTENPFGVSSSSVSS
ATISGAPLQPTSRRQSFITLEKFDGSENRPFSPSPLNNMSSTVIVKNNPEGMAKTDNPSK
ANKREVALSKSDSEKIMHGTKRSSRRSSKLEPIGSKKSKPLMRSEQEKSTGESVDGTIAL
DNSPPGLLNQTECVLDNQVHLSESTMEYEDTMLKSTVENTVLLENNTVEERTLEINLESK
ENTPPAIITDQTVNEDSHIQVTPNQKTLRRSLRRRSETVEPTTDSQDKENNHQKRERRKE
EEKTPQKSPLHEKDDVLPKQKLISEQCVQENLVDKGNNIHEKAFGDTSANAEIDENRRKP
DLENTKSEGDGVQDIADKSSEKPVRGRTRYQTRRASQGLLSSIENSESDSSEAKEEGSKK
KRSGKGKNKSSDSVDIEDQEEKMVNQECMKVENQAHDYKENSEVDKDIESQVCEKRDESN
TVTLQDSIVSPDLLQVSDDVLNTSEGKSKTNKDAEHSFANPSVPESYLRTRNANKRLHKR
DSMENSVGESSKIGTPDISLLSEKTLQTVECQHKRSRRVRRSKGCDCCGEKSQPQEKSFI
GLKNTENYDVKVNETKKTDMETPVSISETSKADLDSEVKLLDEHHSVNFHLDLKEENDTT
NDSLIVSETELKENTTQSFLPSEMVKFKETSGRDSEEAIFLESQEPSNKKCKTVDPHLDV
SKDISLECFTLETKEEKSEATPKEKLNTENTVNVESNAESNPEVDAVELNVENDQSEAGF
SEQNSVKTGISEKEVTEENSERMDSPEKLKAGEAVTEEFNSATDYSDNPTPVKVSAQVEI
SEQVAVGELGRGSDESDPGSFEEMNAEIKNCEKTVVGEVTTESDHVSETEDEDLTTKAAL
PIEAETKELDVEVDSFVPDTLEMITEEGKVDLNKTETNTEPNKLEETQLDDNQMVVESNE
TLPEVHHTSEKVEEIPQPLTSETGVSELISEDSNTSPQKLKDIDPLFMSANESPSGLHTR
CVWSPLASPSTSILKRGLKRPQEDEISSPVHKVRRVSFADPIYQAGLADDIDRRCPIVRC
HSSNSSFMVKSVKTSPTVQSKHNTTSAKGFLSPGSRSSKFKSSKKCLIAEMSKESVPCPT
ESVYPALVNCVAPVDIILPQITSNMWARGLGQLIRAKNIKTIGDLSTLTASEIKTLPIRS
PKVSNVKKALRIYHEQQVKSRGLEEIPVFDISEKTINGMENKSISPDEERLASDLIDPVT
LEAPLSKNLVAQISALALQLDSEDLHNYSGSQLFEMHEKLGSMANCIIKNLQSRWRSPAH
ENSF
NT seq
7395 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgcggaccagagccccctggcgccgctgttggagactttggaagacccttcc
gcctccgttggagagcagacggacgcttacctgaccctgaccagtcgtatgactggagaa
gatggaaaagaaatcattgcagaaattgagaaaaaacttcctcagctatttaaagtttta
gagactcacattgccagtcaaaactcagagctcagtagtgctgctctacaggccttgggg
ttttgcttatataatcccaaaattgcctctggattatcagagatagatattcaagaactg
ctttcaaaactgaatgatattgttaaaagttcagataaaaatgtacgtactagggcactt
tgggtgatatccaagcagacatttcccactgaagttgttggcaaagtagtatctagtata
attgactcattagaaatagtatttaatagaggagagatgcattctgctgttgtggattat
gaagcattaaatgtcatcataagactaattgaacaagccccagttcaaatgggagaagag
tcagttaggtgggcaaaattggtcatacctttagtggttcattcagcccaaaaagtacat
ttgcggggagccagtgctttagagatgggaatgcctttgttgcttcagaaacaacaagaa
atagcatctatcacagagcagcttatgactaccaaattactttcagaactccagaaacta
tttatgagtaaaaatgagacttacgtgttaaaattatggcctttatttgtcaaacttctt
gggaagaccttgcatcgaagtgggagtttcatcaattctctattacagctggaagaactg
ggatttcgtagtggagcacccatgattaaaaaaatagcttttattgcttggaagagttta
atagataattttgctttaaatccagaaatactgtgtagtgcaaaaagactgaagttgttg
atgcaacctttgagttctattcatgtgagaacagaaactctagcgctgacaaaactagaa
gtctggtggtatttgttgatgagactaggacctcatcttcctgctaattttgaacaggtt
tgtgtgcctctgattcaaagcacaataagcattgattctaatgtttcacctcaggggagt
tcatctcgtgtagctactactccaggtttaaaccctatgaccccagtacacaaaggtgct
tctccatatggaactcccgtaacccctcggatgaacttgaattcaaattttggaatggcc
acaatcccctctatacaacttttggggcttgaaatgttgcttcattttttgttgggtcca
gaagttgtgagttttgctaagcaaaacaaacttatactgagcctagagccacttgaacat
ccattaatcagcagctcttcttttttttccaaacactcaaatacacttatcactgctgtt
catgatagctttgttgcagttggaaaagatgcttctgatgtagttatcaatgctatttgg
aaggagttaattagcttggtgaagtcagttattgaatcaggtaacaaaaaagagagacca
ggttctgaagttttgacccttttattaaaatctttggaaagcatagtgaattcagaagta
tttcctgtattgaaaacactggttctcatggaaattacaattaaaggacttcctcagaaa
gtattaggttctccagcatatcaggttgctaatatggatattcttaatggaacccctgct
ttgttcttaattcagttaattttcaataataatctattggaatgtggtgtggaagatgaa
aggttttttctcaacctggaaacacttgttggctgtgttctttctggtccaacctcacca
ctagctttcagtgactctgtcttaaatgttattaatcaaaatgcaaagcagctggacaac
aaggagcatctctggagaatgtggagtattatagtcaccccattaacagaattgattaat
cagaccaatgaagtgaatcaaggtgatgccttagaacataatttcagtgctatctatggt
gcactgattttgccaataaaccatatttttccagcacaaaaaattccagtggtcaccatg
aagaccttacttaaaacttggtcagaattatatagagcatttgctcgctgtgcagctttg
gtggcaactgcagaagagaatttatgctgtgaggaactttcttccaagataatgtccagt
ttggaagatgaaggcctttcaaatttactgttcttggataggatcactcatattattact
gtaatggttgattgtattgacttttcaccatataatattaaatatcaacccaaaactaaa
tcaccacagagaccttcagattggtccaaaaagaagaaggaacctttagggaagctggct
tctttatttaaacttattgtgagagtgatctattcttttcacacactgagcctcaaggaa
gtacattctgataccctcctcactattggcaactcgatcaccagcattctttccagtgta
cttggacgtatttctctgccttctatgatccggaaaatatttgcagctttaacaagacct
ctggcattattttatgaaaactcaaagtttgatgaagttcctaaagtgtatagttgtatg
aacaacaagttagaaaagctactaggagaaattattgcttgtctacatgtcagctacact
ggaacttatgacaatgaacttcttgaacagatctcgccattattatgcataatattttca
cacaagaataaacagataagaaaacaaagtgctcagttctggaatgccacatttgctaaa
gtgacgatgttgatttatcctgaggagttaaagccaatactaaaacaagccaaacaaaaa
tctctgcttttattgcctggtttggaaaatgttgaaattatggaggaatccagtggacta
tattcagatacaacagaaaattcacaattaaatatgaagataagtggcatggaaagaaaa
tcaagtggaaaaagagattcttttttggcggcacaaacaaaggatacaaaagacagtgtg
aaaccaccagctaaattgaaactagagtcttcaactccgaagagtgaaatgcctttggaa
gaagaaaagtctactgactttgtgtttatacctccagaaggaaaagaaacaaaggaaaga
atactaactgaacaccagaaagaagtactcaaaacaaagaggtgtgatattcctgccatg
tataataatctggatgtttcacaagatactttattttctcagtatagtcaggaagaatct
acggaaatttctacttcaattgaaaaatcaaaagactccaagatgatatttaaggaggaa
caaaaggagaatgacgttgtcgttcctcaacatgtcatggaaaactgcggtatggatgaa
catcttgaaaaggcttcccttttgaataatgagtgtggttctattgaggaaaccagtcca
aaaatactgagcagtaataatgataccagaaagaaagctttaattgcttcaaagaaacca
actgaatatgcatctactacagaaaatccatttggtgtcagcagtagttcggtttctagt
gccaccatttctggagctcccttacagcctacaagtcgaaggcaatcctttattactttg
gaaaagtttgatggttcagaaaatagaccttttagtccctcacccttgaataacatgtca
tcaactgtaatagtgaaaaataacccggaaggcatggctaaaacagataatccatcaaaa
gcaaacaaaagagaagtggctctttccaaatctgactctgaaaaaataatgcatgggact
aagagatcaagccgaaggtcaagtaaacttgaaccaatagggagtaaaaagtctaaaccc
ttaatgagatctgaacaagagaaaagtactggagaatctgttgatggcacgatagcctta
gataatagcccacctggcttgcttaatcagacagaatgtgtgttagataatcaggttcat
ctctctgaatctacaatggagtatgaggatacaatgcttaaatcaacagtggagaatact
gtattattagaaaacaatactgtagaagagagaaccttagaaattaacttggaatccaaa
gaaaatacacccccagccataataacagatcagacagtaaatgaggatagtcatattcag
gtaactccaaatcagaaaacccttaggcgatctttaaggcgccgttcagaaacagtagaa
ccaaccactgatagccaagataaagaaaataatcatcaaaaaagggaaagacgtaaagaa
gaagaaaagactccgcagaagagtccattacatgaaaaagatgatgttttacctaagcaa
aaattgatttctgaacaatgtgtacaggaaaacttagttgacaaaggaaataatatacat
gagaaggcttttggggataccagtgctaatgctgaaattgatgaaaatagaagaaagcca
gatcttgagaatactaaatctgagggagatggtgtgcaggacattgcagataaatcctcc
gagaaaccagtaaggggacgaacacgatatcaaacgagaagagcatcccagggtttactt
tccagcattgaaaactcagaatctgatagttctgaggcaaaagaagaaggttctaaaaag
aaaagatctggaaaagggaagaacaaaagcagcgacagtgttgacattgaagatcaagaa
gagaaaatggtaaatcaggaatgtatgaaagttgaaaatcaggcacatgattacaaagag
aattctgaagtagacaaagatatagaatctcaagtctgtgaaaaaagagatgaaagtaat
actgtaactcttcaagattctatagtatctccagatttattacaagtttctgatgatgta
ttgaatacttctgagggaaaaagtaaaactaacaaagatgcagaacattcctttgcaaat
ccttctgtaccagaatcatatctaaggactagaaatgccaataagaggttacataagcga
gattctatggaaaatagcgtgggggaatcctcaaaaatagggacaccagacatttctttg
ctttctgaaaaaactcttcagacagtagaatgccaacacaagagaagtagaagggtgagg
cgatctaaaggttgtgattgttgtggagaaaaatcacagcctcaggaaaagtcatttatt
gggttaaaaaatacagaaaattacgatgtaaaagtcaatgaaacaaaaaagacagatatg
gaaacacctgtatctatttcagaaacttcaaaagctgatctggactcagaggtaaaactt
ttagatgagcatcacagtgtgaattttcatttggatctcaaggaagagaatgatactact
aatgactcattaattgtatctgaaactgagttgaaagaaaatactactcaaagctttctt
ccttctgaaatggtaaaatttaaagaaacttctggtagggattctgaggaagcaatattt
ctagaaagccaggagccatctaataagaaatgtaaaactgttgacccacatttagatgtt
tccaaagatatttcactggaatgttttactttggagaccaaagaagaaaagtcagaggcc
accccaaaagagaaattgaatacagagaacactgttaatgttgaatcaaatgcagaatca
aatccagaagtagatgctgtggaattgaatgtagaaaatgatcagtctgaagctggcttc
tctgaacaaaacagtgtcaaaactggtatttcagaaaaagaagtaacagaggaaaacagt
gaaagaatggattcacctgaaaaactgaaagccggtgaagcagtaactgaggaatttaat
tcagctactgattattctgataatccgacacctgtaaaagtgagtgctcaggtagagatc
tctgaacaagtagcagttggggagctaggcagaggaagtgatgaatctgatccaggctca
tttgaagaaatgaacgctgaaataaaaaattgtgaaaaaacagtggttggtgaggtgact
actgaatctgaccatgtctctgaaacagaagatgaagatttaactaccaaagctgctctg
cctatagaagctgaaacaaaggagttagatgtagaagttgatagctttgttcccgacaca
cttgagatgatcactgaagaaggaaaggttgaccttaataaaactgaaacgaatactgaa
cctaataaattggaggaaacacaactagatgacaatcaaatggtagtggaaagtaatgaa
actttaccggaagttcaccatacttcagagaaagtagaggagataccacaacctctgaca
tctgaaacaggtgtttctgaactgatatcagaagacagtaatacatctcctcaaaaacta
aaggatattgatcctctattcatgtcagcaaatgagagtcctagtggcttgcacacacgt
tgtgtctggtctcctttggcttctccatccaccagcattttaaagagaggactaaaaaga
ccccaagaagatgaaatctcgtcacctgttcacaaggttcgccgtgtctcctttgcagat
cctatataccaagcaggattggcagatgacattgataggcgatgccctattgttaggtgc
cattcttcaaatagttctttcatggtaaaaagtgttaaaacttcacctactgtgcaatct
aagcataataccacttcagccaaaggatttctgtccccaggatcacgtagctctaaattt
aagagctcaaagaagtgtttaattgcagaaatgtctaaggaatctgtgccatgcccaaca
gaaagtgtttaccctgctttggtgaactgtgtagcaccagttgacatcattttacctcag
attacatccaacatgtgggcaagaggactgggacagctcattagagccaagaatataaaa
acaattggcgatttgagtacccttacagcatctgaaataaaaactcttcctatccgttct
ccaaaagtgtctaacgtgaaaaaggctctcagaatatatcatgagcaacaggtgaagtct
cgtggactagaagagattccagtttttgatatttctgaaaaaacaataaatggaatggaa
aataaatctatctctcctgatgaagaaagacttgcctcagatttaattgatcctgttact
ttagaagctccgttatctaaaaatcttgttgcacagattagtgcacttgctcttcaacta
gattcagaagatctccataattattcagggagccagctgtttgaaatgcatgagaaactt
ggtagcatggcaaactgtataattaaaaatctgcagtcacgttggaggtcaccagcccat
gaaaattctttttag
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