Cervus canadensis (wapiti): 122453805
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Entry
122453805 CDS
T07554
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccad03036
]
122453805 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccad04812
]
122453805 (CLASP1)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
122453805 (CLASP1)
Cytoskeleton proteins [BR:
ccad04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
122453805 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Cnd1
HEAT_2
HEAT_DAAF5
MMS19_N
ParcG
MMS19_C
TAN
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
122453805
NCBI-ProteinID:
XP_043343963
LinkDB
All DBs
Position
15:5452526..5715971
Genome browser
AA seq
1545 aa
AA seq
DB search
MEPRMEACLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQALLLKIMD
QAANPQYVWDRMLGGFKHKNFRTREGTCLCLVATLNASGAHTLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN
FDDEDSVDGNRPSSASSTSSKAPASSRRNVGMGTTRRLGSSSLGSKSSAAKEGAGAVDEE
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQTHL
KSSDSVVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSASTAGSLQRSRS
DIDVNAAASAKSKISSAAGTAPFSSAAALPPGSYASLESRHTRGDTEPLGLDSGRIRTRR
QSSGSATNVASTPDSRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYSGLAGGS
SRGPPVTPSSEKRSKIPRSQGCSRETSPSRVGLARSSRIPRPSTSQGCSRDASRESSRDT
SPARGFTPLASRRHSRSTSALATADSVGPSDRFGLGQAGRIPGSVNAMRVLSTSTDLEAA
VADALLLGDSRSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTE
DVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFS
MFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQ
FNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPK
SSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNT
IGRTPSRHPSSRTSPLTSPTNCSHGGLSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSF
RSQEDLNEPIKRDGRKDCDIVSRDGGIASPATEGRGGSEVVEGGRTALDNKTSLLNTQPP
RAFPGPRARDYSPYPYSDTISAYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSN
HNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREI
LRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIVQT
ADYPINLAAIKMQTKVVERIAKESLLQLLADIIPGLLQGYDNTESSVRKASVFCLVAIYS
VIGEELKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcgcatggaggcctgcctcgcacaggtgctgcagaaggatgtggggaagcga
ctgcaggttggccaagagctgatagactatttctcagacaaacagaagtctgccgacctc
gagcatgaccagaccatgttagacaaacttgtggatggactcgctacctcttgggtgaac
tccagcaattataaggtggttctcctgggcatggacatcctgtccgcgttggtcacccgg
ctgcaggatcggttcaaggcgcagatcggtacagtgctgccaagtttaatagacagactg
ggagatgctaaagactctgtgagggagcaagaccaggccctgctgctgaagatcatggat
caggctgctaatccccagtacgtgtgggaccggatgctgggcggcttcaagcacaagaac
ttccgcacccgggaaggcacgtgtctctgcctcgtggccaccctcaacgcctctggagca
catacgttaacactaagcaagatcgtgccacatatatgtaacctactaggagatcccaac
agccaggttcgagatgcagcaataaacagcttagtggaaatttacagacatgtaggagaa
cgtgtgagggcagatctcagtaaaaaaggattgccacagtcccggttgaatgtaattttt
acaaaatttgatgaagtccaaaaatctggaaacatgatacaatctgcgaatgataaaaat
tttgatgatgaagattctgtggatggtaatagaccttcttccgccagctctacgtcgtcc
aaagctccagcaagctcacggagaaacgttggaatgggcaccacccggaggctcggctcc
tcctctctgggatccaagtcttcagctgcaaaagaaggagctggtgctgttgatgaagag
gattttattaaagcatttgacgatgtgcctgtagtccagatttattccagccgagacctt
gaggagtccataaacaagattagggaaatactatctgatgacaagcatgattgggagcaa
agagtaaatgctctaaaaaagattagatctttactcttggctggtgctgccgagtatgat
aacttcttccagcacttacggcttttggacggagcctttaaactgtcggctaaggaccta
cggtctcaggttgtgcgggaggcttgtatcacgctggggcacctgtcgtcagtactgggg
aataagtttgaccacggcgctgaagccatcatgccaacgatctttaatttaatcccaaac
agtgccaaaatcatggccacctcgggggttgtagctgtcaggctaatcattcggcacaca
cacatcccgaggctaatccccgtcataacaagcaactgcacctccaagtctgttgcagtt
agaaggcgctgctttgaatttttagatctacttttacaagaatggcagacacattcattg
gaacgacacatatcagtattagctgaaacgataaagaagggaatacatgatgctgattca
gaagcaaggatagaagccagaaagtgttactggggtttccacagtcacttcagcagggag
gcagagcacctgtaccacacgctggagtcctcctaccagaaggccctgcagacccacctc
aagagctcggacagcgtggtgtcgctgccgcagtcggaccgctcgtcctccagctcccag
gagagcctcaatcggccgctctctgccaaaagaagtcctactggcagcaccacctccaga
gcttccacggtcagcaccaagtccgcatccaccgcggggtccctgcagcggtctcgaagc
gacatcgacgtgaacgcggccgccagcgccaaatccaagatctcctcggctgccggcaca
gcgcccttcagctcggccgcggccttacctccgggctcgtatgcgtccttagagtccaga
cacacaaggggagacacggagcccctaggcctcgactcaggccggatccgcacgcgacgg
cagagctccgggagcgccaccaacgtcgcctctacaccggacagtcggggccgcagtcgc
gccaaagtggtctcacagtcccagcgatccagatctgctaatcctgctggtgctggcagc
cgatccagttccccagggaaattgttgggaagtggttatagtggccttgctgggggttcc
tcaagaggcccacctgtgacgccctcttcagaaaaacgaagcaagattcccaggagtcag
gggtgtagtcgagaaacaagtccaagccgcgtaggattagcacggagcagccgtatccct
cgacccagcacgagtcaggggtgcagccgcgatgccagccgtgagagcagccgggatacg
agccctgctcggggcttcacgccgctcgcctctcgacgtcattccaggtccactagtgct
ctcgccacggctgactctgtggggccgtcagaccgctttgggctcggccaggcaggaaga
attcctggttctgtgaacgccatgcgggttctgagcaccagtacagatctggaagctgct
gttgctgatgctttgctgttaggagactccaggagcaagaagaagcctgtgaggaggaga
tacgagccctacgggatgtactctgatgatgacgccaacagtgacgcctctagcgtgtgc
tctgagcgctcctacggctcccggaacgggggtatcccccactacctgcgccagactgag
gatgtggccgaggtgctcaaccactgtgccagctccaactggtctgagaggaaggaaggg
cttctgggtctgcagaacctgctcaagagccagaggacgctgagtcgagtagaattgaaa
cgattgtgtgagattttcacccgaatgtttgctgaccctcacagcaagagagttttcagt
atgtttttggagactcttgtggattttataataattcataaggatgacttgcaagactgg
ctttttgttcttctcacacaattactgaagaaaatgggagcggatttacttggatctgtg
caagcaaaagttcagaaggctcttgatgtcacaagggactcctttccatttgatcaacaa
tttaacattttgatgcgatttattgtggatcagactcaaactcctaacctcaaggtcaaa
gttgcaatcctgaagtacattgagtctctcgccaggcagatggacccaacagatttcgta
aactctagtgagacaaggcttgctgtttctagaattataacctggacaacagaaccaaag
agttcagacgtgagaaaggcagcacaaattgtgctcatctctctgtttgaattgaacact
cctgaatttaccatgttacttggtgccttgccaaaaacattccaggatggtgccaccaaa
ctcctgcataaccacctcaagaattccagtaacaccagtgtgggctctccaagcaacacc
attggccggactccctcccgacaccccagcagccggaccagccccctgacctcacccacc
aactgctcccacggcggcctgtctccaagcatgctggactatgatacagaaaatctgaac
tctgaagaaatctatagttctttgcgtggagtgacagaagccattgagaagtttagtttt
cgaagccaagaggatctgaatgagcccattaaaagagatggcagaaaggactgcgatatt
gtgtcccgtgatggtggcatcgcctcccctgccacggagggccggggcggcagcgaggtg
gtggaaggaggccggacggctctggacaacaagacctccctcctcaacacgcagccccct
cgcgccttcccggggccgcgggcgcgggactacagcccctacccctactcggacaccatc
agcgcctacgacaagaccgccctgaaggaggccgtgttcgacgacgacatggagcagctg
cgagatgtgcccattgaccactcggacctggtggcagacctcctgaaggagctgtccaac
cacaacgagcgcgtggaggagcggaagggcgcgctgctggagctgctcaagatcacgcgc
gaggacagcctgggcgtctgggaggagcacttcaagaccatcctgctgctgctgctcgag
accctcggggacaaggaccattccatccgagcactggctctcagagtgttgcgggaaatc
ctgagaaaccagccagcgaggtttaaaaactacgcggagctgacgatcatgaagaccctg
gaggcccacaaagactcccacaaggaggtggtgagggctgccgaagaagccgcatccacg
ctggccagttccatccacccagagcagtgcatcaaagtgctgtgccccatcgtccagaca
gccgactaccccatcaacctggccgccatcaagatgcagaccaaagtcgtcgagaggatc
gccaaggagtccctgctgcagctcctcgcagacatcatcccaggcctgctgcagggctac
gacaacacggaaagcagcgtgcgcaaggccagcgtgttctgcctggtggcgatctactct
gtgatcggggaggagctgaaacctcacctggcgcagctcacggggagcaagatgaagctg
ctcaacttgtacataaagagggcgcagaccaccaacagcaacagcagctcctcgtccgac
gtctcgacccacagctaa
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