Cervus canadensis (wapiti): 122454201
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Entry
122454201 CDS
T07554
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03420
Nucleotide excision repair
ccad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122454201 (ERCC8)
09124 Replication and repair
03420 Nucleotide excision repair
122454201 (ERCC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccad04121
]
122454201 (ERCC8)
03400 DNA repair and recombination proteins [BR:
ccad03400
]
122454201 (ERCC8)
Ubiquitin system [BR:
ccad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122454201 (ERCC8)
DNA repair and recombination proteins [BR:
ccad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
122454201 (ERCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WDR55
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_RIG_1st
Beta-prop_Nup120_160
NBCH_WD40
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
122454201
NCBI-ProteinID:
XP_043344412
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Position
16:17486502..17536039
Genome browser
AA seq
397 aa
AA seq
DB search
MLGFLSARQAGLEDPLRLRRAESTRRVLGLELNKDRDVERIHCSGVNTLDIEPVEGRYML
SGGSDGVIVLYDLENSSRQPYYTCKAVCSVGRSHPDVHKYSVETVQWYPHDTGMFTSSSF
DKTLKVWDTNTLQIADVFNFEETVYSHHMSPVASKHCLVAVGTRGHKVQLCDLKSGSCSH
ILQGHRQEILAVSWSPRYEHILATASADSRAKLWDVRRASGCLITLDQHNGKKSQAAESA
NTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVYNDSRKGLKFTVS
SGCSSEFVFVPYGSTIAVYTIYSGEQITMLKGHYKSVDCCVFQSNFQELYSGSRDCNILA
WVPSLCESVPDDDDETSTRSQLNPAFEDAWSSSDEEG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgctagggttcttgtcagcgcgacaagcgggtttagaagaccctcttcgcctccggaga
gcagagtccacacggagggttttgggactggagttaaacaaagacagagatgttgaaagg
atccattgcagtggagttaacacgcttgacattgagcctgttgaagggagatacatgtta
tcaggtggttcagatggtgtgattgtgctttatgatcttgagaactccagcagacaacct
tattacacgtgtaaagcagtgtgttccgttggcagaagccatcccgatgttcacaaatac
agtgtggagaccgtacagtggtatcctcatgacactggcatgttcacatcaagttcattt
gataagactctgaaagtatgggatacaaatacattacaaattgccgatgtatttaatttt
gaagaaacggtttatagtcatcatatgtctccagtcgccagcaagcactgtttggtagca
gttggtactagaggacacaaagtacaactttgtgacttgaagtctggatcctgttcccac
attctacagggtcacagacaagaaatattggcagtttcctggtcaccacgttatgaacat
atcttggcaactgcaagtgctgacagtagagcaaaattatgggatgtgaggagagcatca
ggatgcttgataactcttgatcagcataatgggaaaaagtcgcaagcagctgaatcagca
aacactgctcataatgggaaggttaacggtttatgttttacaagtgatggtcttcaccta
ctcactgttggcacagataatcgaatgaggctctggaatagttccaatggagaaaataca
ctagtcaactatggaaaagtatataatgatagtagaaaaggattgaaattcactgtctcc
tctggctgcagttcagaatttgtttttgtaccatatggtagcaccattgctgtttataca
atttactctggagaacagataactatgcttaagggacactataaaagtgttgactgctgt
gtatttcagtctaatttccaggaactttacagtggtagcagagactgcaatattcttgct
tgggtaccatccttatgtgaatcagttcctgatgatgatgatgagacttcaaccagatca
cagttaaatccagcatttgaagatgcctggagcagcagtgatgaggaaggatga
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