Cervus canadensis (wapiti): 122454803
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Entry
122454803 CDS
T07554
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03013
Nucleocytoplasmic transport
ccad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122454803 (PNN)
03015 mRNA surveillance pathway
122454803 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122454803 (PNN)
03041 Spliceosome [BR:
ccad03041
]
122454803 (PNN)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122454803 (PNN)
Spliceosome [BR:
ccad03041
]
Complex C
Other components
EJC/TREX
122454803 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
122454803
NCBI-ProteinID:
XP_043345348
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All DBs
Position
17:complement(19960319..19967623)
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AA seq
721 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVVR
NEEQKSEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEIGIVHSDAEKEQEEEEQK
QEMEVKMEEETEVRESEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMEINQVESIEPSEN
ETSKELEPEMEFEVEPDKECKSVSPAKENASTLEMENEPEEKEEKESEPQPEPMAQPQSL
PQPQPQSQPQSQSQPQQVLQPQPLSQPENLPLAVSQPPPQVVQEQGHLPPERKEFLVESV
KLTEVTEPVLTVHSESKNKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSS
SSGSSSSRSSSSSSSSSSGSSSRDSSSSTTSSSESRSRSRGRGHNRDRKHRRSVDRKRRD
ASGLERSHKSSKGGSGRDAKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKR
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcagtgagaactttgcaggagcagctagaaaaggccaaagagagcctaaag
aatgtggatgagaatattcgcaagctcaccgggcgggatccgaatgacgtgaggcccatc
caagccagattgctcgccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggaggggagcgtcggactcgacgagaatcacgccaagaaagc
gacccagaggatgatgatgttaagaagccagctttgcagtcttcagttgtagctacctcc
aaagagcgcacacggagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccggcgaatatttggcttgttgatgggcacccttcagaaatttaaacaagaatcc
actgttgctaccgaaaggcaaaagagacgccaggaaattgaacaaaaacttgaagtgcag
gcagaagaagaaagaaaacaggttgaaaatgagaggagagaactgtttgaagagagacgt
gctaaacagacagaactgcgacttttggaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgagcataatgccaagataataaaatatatcagaactaaaacaaagccccat
ttgttctatattcctggaagaatgtgtcctgctacccaaaaattaatagaggagtctcag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagaacatcaggtggtggtgcgt
aatgaagaacagaagtcggaacaagaagagggtaaggtggctcagcgagaggaagagttg
gaggagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaa
aaggaaattggtatagttcatagtgatgcagagaaggaacaggaggaggaggaacaaaaa
caggaaatggaagtaaagatggaggaggaaactgaggtaagggaaagtgagaagcagcag
gatagtcagcctgaagaagttatggatgtgctagagatggtcgagagtgtcaaaaatgta
attgctgagcaggaggtaatggaaatcaatcaagttgaaagcatagaaccgtcagaaaat
gaaactagcaaagaattggagccagaaatggaatttgaagttgagccagataaagaatgt
aaatctgtttctcctgcaaaagagaatgctagtactctagaaatggaaaatgagcctgag
gaaaaagaagaaaaagaatctgagccccaacctgagcctatggctcaacctcagtccctg
cctcagccccagccccagtcgcaacctcaatcccagtctcagccccaacaagtactccag
ccccagcctctctctcagcctgagaatttgccgttagctgtttcacagccaccacctcag
gttgttcaggagcaagggcatttgccacctgagaggaaggagtttcttgtagagtctgta
aaactcactgaggtgacagagccagtcctgacggtacattcagagagcaagaacaaaacc
aaaactaggagcagaagtagaggtcgagctagaaataagacaagcaagagtagaagtcga
agcagtagcagtagcagttccagtagcagctcaaccagtagcagcagcggcagcagttcc
agcagtggcagcagcagtagccgcagtagctccagtagcagctccagttccagcggcagc
agcagtagagacagtagcagcagcacgactagcagtagtgagagtaggagtcggagtagg
ggccggggacataacagggatagaaagcacaggaggagcgtggatcggaagcgaagggat
gcttcaggactagaaagaagtcacaagtcttcaaaaggaggtagtggtagagatgcgaaa
gggtcaaaggataagaattcccggtctgacagaaagaggtctatatcagagagtagtcga
tcaggcaaaagatcttcaagaagtgaaagagaccgaaaatcagacaggaaagacaagagg
cgttaa
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