KEGG   Cervus canadensis (wapiti): 122454803
Entry
122454803         CDS       T07554                                 
Symbol
PNN
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad03013  Nucleocytoplasmic transport
ccad03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122454803 (PNN)
   03015 mRNA surveillance pathway
    122454803 (PNN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccad03019]
    122454803 (PNN)
   03041 Spliceosome [BR:ccad03041]
    122454803 (PNN)
Messenger RNA biogenesis [BR:ccad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     122454803 (PNN)
Spliceosome [BR:ccad03041]
 Complex C
  Other components
   EJC/TREX
    122454803 (PNN)
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 122454803
NCBI-ProteinID: XP_043345348
LinkDB
Position
17:complement(19960319..19967623)
AA seq 721 aa
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVVR
NEEQKSEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEIGIVHSDAEKEQEEEEQK
QEMEVKMEEETEVRESEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMEINQVESIEPSEN
ETSKELEPEMEFEVEPDKECKSVSPAKENASTLEMENEPEEKEEKESEPQPEPMAQPQSL
PQPQPQSQPQSQSQPQQVLQPQPLSQPENLPLAVSQPPPQVVQEQGHLPPERKEFLVESV
KLTEVTEPVLTVHSESKNKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSS
SSGSSSSRSSSSSSSSSSGSSSRDSSSSTTSSSESRSRSRGRGHNRDRKHRRSVDRKRRD
ASGLERSHKSSKGGSGRDAKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKR
R
NT seq 2166 nt   +upstreamnt  +downstreamnt
atggcggtcgcagtgagaactttgcaggagcagctagaaaaggccaaagagagcctaaag
aatgtggatgagaatattcgcaagctcaccgggcgggatccgaatgacgtgaggcccatc
caagccagattgctcgccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggaggggagcgtcggactcgacgagaatcacgccaagaaagc
gacccagaggatgatgatgttaagaagccagctttgcagtcttcagttgtagctacctcc
aaagagcgcacacggagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccggcgaatatttggcttgttgatgggcacccttcagaaatttaaacaagaatcc
actgttgctaccgaaaggcaaaagagacgccaggaaattgaacaaaaacttgaagtgcag
gcagaagaagaaagaaaacaggttgaaaatgagaggagagaactgtttgaagagagacgt
gctaaacagacagaactgcgacttttggaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgagcataatgccaagataataaaatatatcagaactaaaacaaagccccat
ttgttctatattcctggaagaatgtgtcctgctacccaaaaattaatagaggagtctcag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagaacatcaggtggtggtgcgt
aatgaagaacagaagtcggaacaagaagagggtaaggtggctcagcgagaggaagagttg
gaggagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaa
aaggaaattggtatagttcatagtgatgcagagaaggaacaggaggaggaggaacaaaaa
caggaaatggaagtaaagatggaggaggaaactgaggtaagggaaagtgagaagcagcag
gatagtcagcctgaagaagttatggatgtgctagagatggtcgagagtgtcaaaaatgta
attgctgagcaggaggtaatggaaatcaatcaagttgaaagcatagaaccgtcagaaaat
gaaactagcaaagaattggagccagaaatggaatttgaagttgagccagataaagaatgt
aaatctgtttctcctgcaaaagagaatgctagtactctagaaatggaaaatgagcctgag
gaaaaagaagaaaaagaatctgagccccaacctgagcctatggctcaacctcagtccctg
cctcagccccagccccagtcgcaacctcaatcccagtctcagccccaacaagtactccag
ccccagcctctctctcagcctgagaatttgccgttagctgtttcacagccaccacctcag
gttgttcaggagcaagggcatttgccacctgagaggaaggagtttcttgtagagtctgta
aaactcactgaggtgacagagccagtcctgacggtacattcagagagcaagaacaaaacc
aaaactaggagcagaagtagaggtcgagctagaaataagacaagcaagagtagaagtcga
agcagtagcagtagcagttccagtagcagctcaaccagtagcagcagcggcagcagttcc
agcagtggcagcagcagtagccgcagtagctccagtagcagctccagttccagcggcagc
agcagtagagacagtagcagcagcacgactagcagtagtgagagtaggagtcggagtagg
ggccggggacataacagggatagaaagcacaggaggagcgtggatcggaagcgaagggat
gcttcaggactagaaagaagtcacaagtcttcaaaaggaggtagtggtagagatgcgaaa
gggtcaaaggataagaattcccggtctgacagaaagaggtctatatcagagagtagtcga
tcaggcaaaagatcttcaagaagtgaaagagaccgaaaatcagacaggaaagacaagagg
cgttaa

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