Cervus canadensis (wapiti): 122455052
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Entry
122455052 CDS
T07554
Symbol
ACAN
Name
(RefSeq) aggrecan core protein isoform X1
KO
K06792
aggrecan 1
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccad00535
]
122455052 (ACAN)
00536 Glycosaminoglycan binding proteins [BR:
ccad00536
]
122455052 (ACAN)
04091 Lectins [BR:
ccad04091
]
122455052 (ACAN)
Proteoglycans [BR:
ccad00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
122455052 (ACAN)
Glycosaminoglycan binding proteins [BR:
ccad00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
122455052 (ACAN)
Lectins [BR:
ccad04091
]
C-Type lectins
Lecticans
122455052 (ACAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
Sushi
EGF
hEGF
EGF_CA
I-set
ig
Ig_3
EGF_3
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
122455052
NCBI-ProteinID:
XP_043345763
LinkDB
All DBs
Position
17:complement(47471517..47540317)
Genome browser
AA seq
2526 aa
AA seq
DB search
MTTLLLVFVTLRVIAAAISVEVSEPDNSLSVSIPEPSPLRVLLGSSLTIPCYFIDPMHPV
TTAPSTAPLAPRIKWSRISKEKEVVLLVATEGRVRVNSAYQDKVTLPNYPAIPSDATLEI
QNLRSNDSGIYRCEVMHGIEDSQATLEVVVKGIVFHYRAISTRYTLDFDRAQRACLQNSA
IIATPEQLQAAYEDGFHQCDAGWLADQTVRYPIHTPREGCYGDKDEFPGVRTYGIRDTNE
TYDVYCFAEEMEGEVFYATSPEKFTFQEAANECRRLGARLATTGQLYLAWQGGMDMCSAG
WLADRSVRYPISKARPNCGGNLLGVRTVYLHANQTGYPDPSSRYDAICYTGEDFVDIPEN
FFGVGGEEDITIQTVTWPDVELPLPRNITEGEARGNVILTAKPDFEVSPTAPEPEEPFTF
VPEVRATAFPAVENRTGEATRPWAFPGESTPGLEAPTAFTSEDLVVQVTLAPGAAEVPGQ
PRLPGGVVFHYRPGSSRYSLTFEEAKQACLRTGAVIASPEQLQAAYEAGYEQCDAGWLQD
QTVRYPIVSPRTPCVGDKDSSPGVRTYGVRPPSETYDVYCYVDRLEGEVFFATRLEQFTF
REAQEFCESQNATLATTGQLYAAWSRGLDKCYAGWLSDGSLRYPIVTPRPACGGDKPGVR
TVYLYPNQTGLLDPLSRHHAFCFRGVSVAPSPGEEEGSTPTAGPDVEDWIVTQVGPGVAA
VPVGEETTATPGFTIEPENKTEWELAYTPAGTFPLPGIPPTWPPTGAATEEHTEGPSATE
VPSASEKPFPSEEPFPPEEPFPSEKPFPPEELFPSEKPFPSEKPFPSEKPFPSEEPFPSE
KPFPPEELFPSEKPFPSEEPFPSEKPFPPEEPFPSEKPIPSEEPFPSEKPFPSEEPFPSE
EPSTLSAPVPSRTELPSSGEASGVPEVSGDFTGSGEISGHLDFSGQPSGESASGLPSEDL
DSSGLTSTVGSGLPVESGLPSGEEERITWTSAPKVDRLPSGGEGPEVSASGVEDISGLPS
GGEVHLEISASGVEDISGLPSGGEVHLEISASGVEDISGLPSGGEVHLEISASGVEDLSG
LPSGEEGHLEISASGVEDLSVIPSGEGPEVSVSGVEDLSGLPSGEGPEVSVSGVEDLSGL
PSGEGPEVSVSGVEDLSGLPSGEGPEVSVSGVEDLSGLPSGEGPEVSVSGVEDLSGLPSG
EGPEVSVSGVEDLSGLPSGEGPEVSVSGVEDLSGLPSGEGPEVSVSGVEDLSGLPSGEGP
EVSASGVEDLSRLPSGEGPEVSASGVEDLSVLPSGEGHLEISASGVEDLSRLPSGEGPEV
SASGVEDLGVLPSGEGHLETSASGVEDLSRLPSGEGHLEISASGEEDLSRLPSGEGPEVS
ASGVEDLGVLPSGEGHLETSTSGVEDLGVLPSGEGHLETSTSGVEDLSRLPSGEGHLETS
TSEVEDLSRLPSGEGHLETSTSEVEDLSRLPSGEGHLETSTSGVEDLSRLPSGEGPEVSA
SGVEDLGVLPSGEGHLEISASGVEDLSRLPSRGEDHLETSASGVGDLSGLPSGRDGLEIS
ASGAGDLSGLISGKEDLTESASGDLDLGRIPSVTLGSGQAPEASGLPSGFSGEYSGVDLG
SGPSSGLPDFSGLPSGFPTVSLVDTTLVEVVTATTAGELEGRGTIDISGAGETSGLPFSE
LDISGGASGLSSGAELSGQASGSPDISGETSGLFGVSGQPSGFPDISGETSGILEISGQP
SGFSGEISGMTELSGLPSGQPEISGEASGILSGLGPPFGITDLSGEAPGIPDLSGQPSGL
PEFSGTTSGIPDLVSSAMSGSGESSGITFVDTSLVEVTPTTFKEEEGLGSVELSGLPSGE
ADLSGTSGLVDVSGLSSGAIDSSGFTSQPPEFSGLPSGVTEVSGEASRAESGSSLPSGAY
DSSGLPSGFPTVSFVDRTLVESVTQAPTAQEAGEGPSGILELSGAPSGAPDMSGDHLGSL
DQSGLQSGLVEPSREPASTPYFSGDFSGTTDVSGESSAATSTSGEASGLPEVTLITSELV
EGVTEPTVSQELGQRPPVTYTPQLFETSGEASASGDVPRFPGSGIEASSVPESSGEMSAY
PEAEVGASAAPEASGGASGSPDLSETTSTFHEADLEGTSGLGASGSPSAFPQGPTEGLAT
PEVSGESTTTFDVSVEASGSPSTTPLASGDKTDTSGDLSGHTSGLDIVISTTIPESEWTQ
QTQRPAEARLEIESSSPVHSGEESQTADTATSPTDASIPTSAGGTDDSEATTTDIDECLS
SPCLNGATCVDAIDSFTCLCLPSYQGDVCEIDQKLCEEGWTKFQGHCYRHFPDRATWVDA
ESQCRKQQSHLSSIVTPEEQEFVNNNAQDYQWIGLNDKTIEGDFRWSDGHTLQFENWRPN
QPDNFFATGEDCVVMIWHEKGEWNDVPCNYQLPFTCKKGTVACGEPPVVEHARIFGQKKD
RYEINALVRYQCTEGFIQRHVPTIRCQPSGHWEEPRITCTDPATYKRRLQKRSSRTLRRS
RPSTAH
NT seq
7581 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttactcttggtgtttgtgactctgagggtcatcgcagcagccatctcagta
gaagtttcagaacctgacaactcgctgagtgtcagcatccctgaaccgtccccgctgcgg
gtcctcctggggagctccctcaccatcccctgctacttcatcgaccccatgcaccccgtg
accaccgccccctccactgcccccctcgccccgagaatcaagtggagccgcatttccaag
gagaaggaggtggtgctgctggtggccactgaagggcgggtgcgggtcaacagcgcctac
caagacaaggtcacgctgcccaactaccccgccatccccagcgatgccaccctggaaatc
cagaacctgcgctccaatgactccgggatctatcgctgcgaggtgatgcacggcatcgag
gacagccaggccaccctggaggttgtggtgaaaggcatcgtgttccattacagagccatc
tccacgcgctacaccctggactttgacagggctcagcgggcctgcctgcagaacagcgcc
atcatcgccacacccgagcagctgcaggccgcctatgaggacggcttccaccagtgcgac
gcaggctggctggccgatcagactgtcaggtaccccatccacactccaagggaaggttgc
tatggagacaaggatgagtttcctggtgtgagaacctatggcatccgtgacaccaatgaa
acctatgatgtgtactgcttcgcggaggagatggagggcgaggtcttctatgcaacatcc
ccggagaagttcacctttcaggaggcagccaacgagtgccggaggctgggcgcccggctg
gccaccacgggccaactctacctggcctggcaaggcggcatggacatgtgcagcgccggc
tggctagctgaccgcagcgtgcgataccccatctccaaggcccggccgaactgcgggggc
aacctcctgggagtgaggaccgtctacctgcacgccaaccagacaggctaccctgaccct
tcatcccgctacgacgccatctgctacacaggtgaagactttgtagacatcccagaaaac
tttttcggggtgggcggcgaggaggacatcactatccagacggtgacctggcctgacgtg
gagctgcccctgccccgaaacataaccgagggtgaagcccgaggcaacgtgatcctcacg
gcgaagcccgactttgaagtctctcccaccgccccggaacccgaagagcctttcacgttt
gtccctgaagtaagggccactgcattccccgcagtggagaacaggactggagaggccacc
cggccctgggcctttcccggagagtccacgcccggcctggaagcccccacggccttcacc
agcgaggacctcgtcgtgcaggtgaccttagccccaggtgcagccgaggtccctgggcag
ccacgactgccagggggagtcgtgttccactaccgcccgggctcctcccgctactcactg
acctttgaggaggccaagcaggcctgcctgcgcaccggggccgtcattgcttcgccagag
cagctccaggccgcctatgaagcaggctacgagcagtgtgacgccggctggctgcaggac
cagacagtcagataccccattgtgagcccgcggaccccctgtgtgggtgacaaggacagc
agcccaggggtcaggacctacggcgtgcggccaccatcagaaacctacgatgtctactgc
tacgtggacagactcgagggggaggtgttctttgccacacgcctggagcagttcaccttc
cgggaagcccaggagttctgtgaatcccaaaacgccacgctggccaccacgggccagctc
tacgctgcctggagccgcggtctggacaagtgctacgccggctggctgtccgacggcagc
ctccgctaccccattgtcaccccgaggcccgcctgcggcggcgacaaaccaggcgtgaga
accgtctacctctaccccaaccagacgggcctcctggatccgctgtcccggcaccacgcc
ttctgcttccgaggtgtttcagtggcgccctctccaggagaagaggagggtagcacaccc
accgcaggccctgacgtggaggattggatcgtgacccaagtggggcctggcgtggctgct
gtccccgtcggggaggagacgactgcaaccccaggcttcaccattgagccagaaaacaag
acggaatgggaactcgcctacaccccagcgggcactttcccactaccagggatccctcct
acatggcctcccactggcgcagcaacagaagagcacacagaaggcccttctgcaacggaa
gtgccctcagcctcagagaagccgttcccctcagaggaaccattccccccagaggaacca
ttcccctcagagaaaccattccccccagaggaactgttcccttcagagaagccgttcccc
tcagagaagccattcccctcagagaagccgttcccctcagaggaaccattcccctcagaa
aaaccattccccccagaggaactgttcccctcagagaagccattcccctcagaggagcca
ttcccctcagagaagccattccccccagaggaaccattcccctcagagaaaccaatcccc
tcagaggagcctttcccctcagagaagccattcccctcagaggagccattcccctcagag
gagccatccacactttcagccccagtgcccagcaggactgagctgccaagctctggggag
gcatccggggtgcccgaagtcagtggtgacttcacaggcagtggagaaatttcaggacac
ctagacttcagtgggcagccctcaggggaaagtgcaagtggactgccctctgaagacctt
gactccagtgggctcacctctacagtgggctcaggcctgcctgtggaaagtggactgcct
tcaggggaagaagagagaattacatggaccagtgctcctaaagttgacaggttgccctct
gggggtgagggcccagaagtttctgcttctggagtagaggacatcagtggacttccttct
ggaggagaggttcatctagagatctctgcctctggagtagaggacatcagtggacttcct
tctggaggagaggttcatctagaaatctctgcctctggagtagaggacatcagtggactt
ccttctggaggagaggttcatctagagatctctgcctctggagtagaggacctcagtgga
cttccttctggagaagaaggtcatctagagatctctgcctctggagtagaagacctcagc
gtaattccttctggagaaggtcctgaagtctctgtttctggagtagaggacctcagtgga
cttccttctggagaaggtccagaagtctctgtttctggagtagaggacctcagcggactt
ccttctggagaaggtcctgaagtctctgtttctggagtagaggacctcagcggacttcct
tctggagaaggtccagaagtctctgtttctggagtagaggacctcagcggacttccttct
ggagaaggtccagaagtctctgtttctggagtagaggacctcagcggacttccttctgga
gaaggtccagaagtctctgtttctggagtagaggacctcagcggacttccttctggagaa
ggtccagaagtctctgtttctggagtagaggacctcagcggacttccttctggagaaggt
ccagaagtctctgtttctggagtagaggacctcagcggacttccttctggagaaggtcca
gaagtctctgcctctggagtagaggacctcagcagacttccttctggagaaggtccagaa
gtctctgcctctggagtagaggacctcagtgttcttccttctggagaaggtcatctagag
atctcagcctctggagtagaggacctcagtagacttccttctggagaaggtccagaagtc
tctgcctctggagtagaggaccttggtgttcttccttctggagaaggtcatctagagacc
tctgcttctggagtagaggacctcagtagacttccttctggagaaggtcatctagagatc
tctgcctctggagaagaggacctcagtagacttccttctggagaaggtccagaagtctct
gcctctggagtagaggacctcggtgttcttccttctggagaaggtcatctagagacctct
acctctggagtagaggacctcggtgttcttccttctggagaaggtcatctagagacctct
acctctggagtagaggacctcagtagacttccttctggagaaggtcatctagagacctct
acctctgaagtagaagacctcagtagacttccttctggagaaggtcatctagagacctct
acctctgaagtagaggacctcagtagacttccttctggagaaggtcatctagagacctct
acctctggagtagaggacctcagtagacttccttctggagaaggtccagaagtctctgcc
tctggagtagaggaccttggtgttcttccttctggagaaggtcatctagagatctctgcc
tctggtgtagaggacctcagtagacttccttctagaggagaggatcatctagagacttct
gcttctggagtaggggaccttagtggacttccttctggaagggacggtctggagatctct
gcttctggagctggggatcttagtgggttgatttctggaaaagaagacttgactgagtca
gcttctggagacttggaccttggcagaataccttctgtaactctaggaagtgggcaagct
ccagaagcaagtggtcttccttctggatttagtggtgagtattctggggtggaccttgga
agtggcccatcatctggccttcctgacttcagtggacttccatctgggttcccaactgtc
tccctagtggatactacattggtggaagttgtcacagccaccacagcaggtgaactagaa
ggaaggggaaccattgacatcagcggtgctggagaaacatctgggctgcccttcagtgag
ttggacattagtggaggagcaagcggactctcttcaggagctgaactcagtggccaagca
tccgggtcacctgacatcagtggggaaacctctggactctttggtgtcagtggacagccc
tcagggtttcctgacattagtggggaaacttccgggattcttgagatcagtgggcagcca
tcagggttttctggagaaatatctggcatgactgagcttagtggactgccctctggacaa
ccagaaatcagtggagaagcttctggaattctttctggccttggtccaccatttggcata
actgacctgagtggagaagcacctgggatccctgatctcagtgggcaaccatcaggtttg
ccagagttcagtgggacaacatctgggatccctgacctggtttccagtgccatgagtggc
agtggtgaatcttctggcattacgttcgtggacaccagtttggttgaagtgaccccaacg
acatttaaagaagaagaaggcttaggatctgtggaactcagtggcctcccttcaggagag
gcagatctctcaggcacatctgggctagtggatgtcagtggactgtcttctggagcaatt
gactccagtgggtttacgtcccagcctccagaattcagtggcctgccaagtggagtaact
gaggtcagtggagaagcctccagagctgagagtgggagcagcctgccctccggagcatat
gacagcagtggacttccgtctggtttccccactgtctcttttgtagacaggactttggtg
gaatctgtaacccaggctccaactgcccaagaagcaggagaagggccttcaggcattctg
gaacttagtggtgccccttctggagcaccagacatgtctggagaccatttgggatctttg
gaccaaagtgggcttcagtctgggctagtggagcccagtagggagcctgcaagtactcca
tattttagtggggacttttctggcaccactgatgtaagtggggaatcctctgcagccacg
agcaccagtggggaggcctccggacttccagaagttacgttaatcacatctgagttggtg
gagggtgttactgaaccaaccgtttcccaggaactgggccagagaccccccgtaacatac
accccccagctttttgaaaccagtggtgaagcctctgcatctggggatgtgccaaggttc
cctggatctgggatagaagcatcatcagtcccagaatccagcggtgagatgtcggcctat
cccgaggctgaggtgggagcgtctgctgcccccgaggcaagcggaggagcttccgggtcc
cctgacctgagtgaaaccacctccaccttccatgaagctgatctggagggaacctcaggc
ctgggagcaagcggcagcccctcagcctttccgcaaggccccacggagggcttggccacc
ccggaagtgagtggagagtcaaccaccacctttgacgtgagcgtagaggcatcaggctca
ccttccaccactcccctggcttctggagacaagactgacaccagcggagacctgtctggc
cacacctcagggctggatattgtcatcagcaccaccatcccagaatccgagtggactcag
caaacccagcgccctgcagaggcacgtctagaaatcgaatcctcaagccccgtgcactca
ggagaagagagccaaacagctgacacagccacctccccaactgatgcttctatcccaacc
tctgcaggagggacagatgattcagaggcaaccacaacagacattgacgagtgcctctca
agcccttgtctgaatggagccacctgcgtggatgccatcgactctttcacatgcttatgc
cttcccagctaccaaggggacgtgtgtgagattgaccagaagctgtgcgaggagggctgg
accaagttccagggccactgttaccgccacttccccgaccgggcaacctgggtggacgcc
gagagccagtgccggaagcagcagtcacacctcagcagcatcgtcacccccgaggagcag
gagtttgtcaacaacaatgcccaggactaccagtggatcggcctgaatgacaagaccatc
gaaggggacttccgctggtcagatggacacaccttgcaatttgagaactggcgccccaac
cagcctgacaacttctttgccactggggaggactgcgtggtgatgatctggcatgagaag
ggcgagtggaacgatgtcccatgcaattaccagctgcccttcacctgtaaaaagggcaca
gtggcctgcggagagccccccgtggtggagcacgccagaatcttcggacagaagaaggac
cggtacgagatcaatgccctggtgcggtaccagtgcaccgagggcttcatccagcgccac
gtgcccaccatccggtgccagcccagcgggcactgggaggagcctcggatcacctgcacg
gaccccgccacctacaagcgcagactacagaagcggagctcacggaccctaaggaggagc
cgccccagcacggcccactga
DBGET
integrated database retrieval system
