Cervus canadensis (wapiti): 122455133
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Entry
122455133 CDS
T07554
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccad03036
]
122455133 (CHD2)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122455133 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Myb_DNA-binding
CHDCT2
Motif
Other DBs
NCBI-GeneID:
122455133
NCBI-ProteinID:
XP_043345969
LinkDB
All DBs
Position
17:53411862..53540157
Genome browser
AA seq
1827 aa
AA seq
DB search
MMRNKDKSQEEDSSLHSNASSHSASEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESS
ESQSESESESAGSKSQPVLPEAKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPS
RFNIKEEASSGSESGSPKRRGQRQLKKQEKWKRELSEDEQEQGTSADSEPEQTVRARRPV
PRRTVPKPRVKKQPKTQRGKRKKQDSSDDEDEDDEAPKRQTRRRAAKNVSYKEDDDFETD
SDDLIEMTGEGVDEQQDNSETIEKVLDSRLGKKGATGASTTVYAVEANGDPSSDFDPEKD
EGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVE
YFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLP
YSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQPAYLGGEN
LELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVP
LSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLK
DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLH
FIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEM
SALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQE
ILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSI
KGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARA
HRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLENNSGRSNSN
PFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDELLSQF
KVANFATMEDEEELDERPHKDWDEIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQ
TNDSDSDTESKRQAQRSSASESETDDSDDDKKPKRRGRPRSVRKDLVEGFTDAEIRRFIK
AYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKENASEGKG
PGKKRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYCLSCRVKAAHFDVEW
GVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPMETDKKPQGKQLQTRADYLLKLL
RKSLEKEGAVTGGEEAKLKKRKPRVKKENKAPRLKDEHGIEFSSPRHSDNPSEEGEVKDD
GLEKSPTKKKQKKKENKENKEKQMSSRKDKEGDKERKKSKDKKEKPKGGDAKSSSKSKRS
QGPVHITAGSEPVPIGEDEEDDLDQETFSICKERMRPVKKALKQLDKPDKGLSVQEQLEH
TRNCLLKIGDRIAECLKAYSDQEHVKLWRRNLWIFVSKFTEFDARKLHKLYKMAHKKRSQ
EEEEQKKKEDVIGGKKPFRPEASGSSRDSLMSQSHTPHNLHPQKPHLPASHGPQMHGHPR
DNYNHPNKRHFSTADRGDWQRERKFNYGGGNNNPPWGSDRHHQYEQHWYKDHHYGDRRHM
DAHRSGSYRPNSLSRKRPYDQYSSDRDHRGHRDYYDRHHHDSKRRRSDEFRPQNYHQQDF
RRMSDHRPPMGYHGQGPSDHHRSFHTDKLGEYKQPLPPLHPAVSDPRSPPSQKSPHDSKS
PLDHRSPLERSLEQKNNPDYNWNVRKT
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaataaggacaaaagccaagaggaggacagttcgctacacagcaatgcatcg
agtcattcagcatctgaagaagcttcgggttcagactcaggcagccagtcggagagtgag
cagggcagcgacccaggaagtggccatggcagtgagtcaaatagtagctctgaatcttcg
gagagtcagtcggaatctgagagtgaatcggcaggttccaagtcccagccagttcttcca
gaagccaaagagaaaccagcctctaagaaggaacggatagctgatgtgaagaagatgtgg
gaagaatatcctgatgtttatggggttaggcggtcaaaccgaagcagacaagaaccatca
cgatttaatattaaggaggaggcaagtagcgggtctgagagtgggagcccaaagagaaga
ggccagaggcagctgaaaaaacaagaaaaatggaaacgggagctctcagaagatgaacag
gagcaaggcaccagtgcagacagcgaaccagagcaaacagtgagagccagaagacctgtc
cccagaagaacagtgcccaaacctcgtgttaaaaagcaacctaagactcagcgtggaaag
aggaaaaagcaagactcttctgatgatgaggatgaagatgatgaagctcccaaaaggcag
acgcgccgcagagcagctaaaaatgtgagttataaagaagacgatgactttgagactgac
tcagatgacctcattgaaatgactggagaaggagttgatgaacagcaggataatagtgaa
actattgaaaaggtcttagattcaaggctgggaaagaaaggagccactggagcttctact
actgtgtatgcagtcgaagctaatggagaccctagtagcgactttgaccctgaaaaggac
gaaggcgaagtccagtacctcatcaagtggaagggctggtcatatatccacagcacatgg
gagagtgaagagtccttacagcaacaaaaagtgaagggtctaaaaaaactagagaacttc
aagaagaaagaggatgaaatcaagcaatggttagggaaggtttctcctgaagatgtggaa
tatttcaactgccaacaagagctggcctcggagctgaacaaacagtatcagatcgtagaa
agagtaatagctgtgaagacaagcaaatctacactgggtcaaacagactttccagctcat
agtcggaagccggccccttccaacgaacctgagtatctatgcaagtggatgggactgccc
tattcagagtgcagctgggaagacgaagccctgatcggaaagaaattccagagctgcatt
gacagcttccacagtcgcaacaactcaaaaaccatccccacaagggaatgcaaggccctg
aagcagagaccacgatttgtggctttaaagaaacagccggcatatttaggaggagagaat
ctggagctccgagattatcagctggaaggtctcaactggcttgctcactcctggtgcaaa
agtaacagtgtaatccttgctgatgaaatgggcctaggaaagaccatccagaccatatcg
ttcctctcctacctgttccaccagcaccagctgtatggcccctttcttatagtcgtccct
ttatccaccctcacctcatggcagagggagtttgaaatctgggcaccagagattaacgta
gtggtttacataggtgacctgatgagcagaaatacgatacgagaatatgaatggattcac
tctcaaaccaaaaggctaaagttcaatgcgcttataacaacatatgagatcctcttaaaa
gataagactgtgctgggcagtattaactgggcctttctgggagtggatgaagcccatcgg
ttgaagaatgatgactctttattgtataaaactctgattgatttcaagtccaaccatagg
ctcctgattacggggacccctcttcagaattccctcaaagagctctggtccttgctgcac
tttattatgcctgagaagtttgagttctgggaagattttgaagaagaccatgggaaaggg
agagagaatggctatcagagtcttcataaggtgctagagcctttccttctccgaagagtg
aagaaagatgtggagaaatctcttcctgccaaagtggaacagattctcagagtggagatg
tcagcccttcagaaacagtattataaatggattttgaccaggaattacaaggctcttgcc
aaaggaacaagaggcagcacatctggtttccttaatattgtgatggaactgaagaaatgc
tgcaaccactgttacctgattaaacctcctgaagaaaatgaaagggaaaatggacaggaa
attcttctgtccctgatcaggagcagtgggaagttgattctattagataaactgttgaca
agacttcgagaaagaggaaacagagtccttatcttctctcagatggtgaggatgttggat
atcctggctgagtacctcactattaagcactaccctttccagcgtctggatggttccatc
aagggagaaatcagaaaacaggcgctggaccacttcaacgcagatgggtctgaggacttc
tgtttcctgctctcgacaagggctggtggcctgggaatcaatttggcttccgcggacaca
gttgtcatctttgactctgactggaatccccagaacgacttgcaggcacaagcccgagcc
cacagaattggtcagaagaagcaggtgaatatttaccgcttggttacaaaggggactgtg
gaggaagagatcatagaacgggccaaaaagaagatggtattggaccatctggtgattcag
cgcatggataccactggccgaacggttctggaaaacaactctggaaggtccaattcaaat
ccttttaataaagaagagctgacagcgattttgaaatttggagcagaggatctcttcaaa
gaacttgaaggggaggaatcagagcctcaggaaatggatatagatgaaattttgcgcttg
gctgaaaccagagagaatgaagtctcaacaagtgcgacagatgaacttctgtcacaattt
aaggttgccaacttcgcaacgatggaggatgaagaagagcttgatgagcgtcctcacaag
gactgggatgagatcatcccagaggagcagaggaagaaagtggaggaggaagagcggcag
aaggagctggaagagatttacatgttgcctcgaattcggagttccactaaaaaggctcag
acaaatgacagtgactctgacacagagtctaagagacaggcccagaggtcctctgcctct
gagagtgagacagatgactctgatgacgacaagaagcccaagcgcagagggcgtccccga
agtgtgcggaaggacctggtggagggattcacggacgctgagattcggaggttcatcaag
gcgtataagaagtttggtctccctcttgaacggctggagtgcatagcacgtgatgctgag
ctggtagataagtctgtggcggatctgaagcgcttgggggaactgattcacaacagctgt
gtgtcagcaatgcaggaatatgaagagcagctgaaagaaaatgccagtgaggggaaagga
ccagggaaaaagagaggcccaactatcaagatatctggggttcaggttaatgtgaaatct
attatccaacatgaagaagagtttgagatgctgcataaatctatccctgtagaccctgaa
gaaaaaaaaaaatattgcttatcctgtcgtgtcaaagctgcacattttgatgtcgagtgg
ggagtagaggatgactctcgtctactgctggggatttatgaacatggctacggaaactgg
gagctaattaaaacggacccagagcttaagttaactgacaaaattctgcccatggagaca
gataaaaagccccaggggaagcagctgcagacccgagcagactacttgctgaagctgctc
aggaagagtctggagaaggagggcgccgtgacgggcggggaagaggccaaattaaagaag
cggaagcctcgagtcaaaaaagaaaacaaagcaccgaggctgaaggacgaacatgggatt
gagttttcatctcctcgacactcggacaatccgtcagaagagggagaagtaaaggatgat
ggcttagaaaaaagtccaacgaaaaagaaacagaagaagaaagagaacaaggagaacaag
gagaaacaaatgagctctaggaaagacaaggaaggggacaaggaaaggaagaaatcgaaa
gacaaaaaagagaagcctaaaggtggtgatgccaaatcttcaagtaaatccaagcgctct
cagggccctgtccacatcacagcaggaagtgaacccgtccccattggagaggatgaggag
gatgatctggaccaggagacattcagcatatgtaaggagaggatgcggcctgtgaagaag
gcgctgaaacagctggacaagcctgacaaggggctcagcgtccaggagcagctggagcac
acccggaactgcctgctgaagatcggggaccggatcgctgagtgcctcaaggcctactca
gaccaggagcacgtcaagctgtggaggaggaacctgtggatttttgtttccaagtttaca
gaatttgatgctcgaaaattgcacaagttatacaagatggctcataagaaaagatctcaa
gaagaagaggagcagaagaagaaagaggatgtgattgggggtaagaaaccatttcgacca
gaggcctcgggttccagccgtgactccctgatgtctcagtcccacaccccgcacaacctt
cacccgcagaagcctcatttgcctgcctctcacggcccacagatgcacggacacccaaga
gacaactacaatcaccccaacaagagacactttagtactgcagaccgaggcgactggcag
agggaaagaaagttcaactatggcggtggcaataacaacccgccctgggggagcgaccgg
caccaccagtacgagcagcactggtacaaggaccaccactacggggaccggcggcacatg
gacgcccaccgctcggggagctaccgccccaacagcctgtcgaggaagaggccgtacgac
cagtacagcagcgaccgagaccaccggggccacagggactactacgaccggcaccatcat
gactctaagcggaggcgatcggatgaatttaggcctcaaaattaccaccagcaggatttc
cgacgaatgtctgatcaccgcccccctatgggctaccacggccaggggccctcggaccac
caccgctctttccacacagacaaattgggggagtataaacagcccctacccccgctgcac
cccgcagtctcagatcctcgctctcccccttctcagaaatctcctcatgattccaagtca
cccctggatcatcggtctcctttggagagatcactagaacagaaaaacaacccagattat
aactggaatgttaggaaaacataa
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integrated database retrieval system
