Cervus canadensis (wapiti): 122455308
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Entry
122455308 CDS
T07554
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04350
TGF-beta signaling pathway
ccad04919
Thyroid hormone signaling pathway
ccad05016
Huntington disease
ccad05169
Epstein-Barr virus infection
ccad05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122455308 (SIN3A)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
122455308 (SIN3A)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
122455308 (SIN3A)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
122455308 (SIN3A)
09164 Neurodegenerative disease
05016 Huntington disease
122455308 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccad03036
]
122455308 (SIN3A)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
122455308 (SIN3A)
REST complex
122455308 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
122455308 (SIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
122455308
NCBI-ProteinID:
XP_043346263
LinkDB
All DBs
Position
17:complement(35067301..35133100)
Genome browser
AA seq
1274 aa
AA seq
DB search
MKRRLDDQESPVYAAQQRRIPGSAEAFPHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP
SYQVSAVPQSSSSHGPAIAAVHSSHHHPTAVQPHGGQVVQSHAHPAPPVAPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGIQPQPQPPPQHPSQPSAQSAPAPAQ
PAPQPPPAKVSKPSQLQAHTPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPPLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRP
SQNGCQIRRHSGTGATPPVKKKPKLLSLKDSSMADASKHGVGTESLFFDKVRKALRSAEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESVHLETFPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPVGPHLSL
AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFAQRGDLSDVEEEEE
EEMDVDEATGAAKKHNGVGGSPPKSKLLFSNTAAQKLRGMDEVYNLFYVNNNWYIFMRLH
QILCLRLLRICSQAERQIEEENREREWEREVLGIKRDKSDSPAIQLRLKEPMDVDVEDYY
PAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLAENNNGATGGQLNTQTSRSLLESTYQRKAEQLMSDENCFKLMFIQSQGQVQLTI
ELLDTEEENSDDPVEAERWSDYVERYMNSDTTSPELREHLARKPVFLPRNLRRIRKCQRG
REQQEKEGKEGNSKKTMENADSLDKLECRFKLNSYKMVYVIKSEDYMYRRTALLRAHQSH
ERVSKRLHQRFQAWVDKWTKEHVPREMAAETSKWLMGEGLEGLVPCTTTCDTETLHFVSI
NKYRVKYGTVFKTP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgacgtttggatgaccaggagtcaccggtgtatgcggcccagcagcgtcggatt
cctggtagtgcagaggcttttcctcaccagcaccgggtgcttgcccctgcccctcccgtg
tatgaagcggtgtctgagaccatgcagtcagccacagggattcagtactctgtgactccc
agttatcaggtttcagcagtgccgcagagctctagcagtcatgggcccgccatcgcagcg
gtgcatagcagccatcatcaccccacagccgtgcagccccatggaggccaggtggtccag
agtcacgctcatccagctccaccagttgcaccagtgcagggacagcagcagtttcagaga
ctcaaggtagaggatgcactctcctaccttgaccaagtgaagctgcagtttggtagtcag
cctcaggtctacaatgacttccttgacatcatgaaggagtttaaatctcagagcatcgac
actccaggagtgattagtcgtgtgtcccagctgttcaaaggccaccctgacctaatcatg
ggcttcaataccttcttgccccctggctacaagattgaggtgcaaaccaatgacatggtg
aatgtgacaactcctggccaggttcatcagatcccaacccatggcatccagccccagcct
cagccaccaccccaacatccttcccagccttcagcccagtcagccccagcacctgcccag
ccagctcctcagcccccacctgccaaagtcagcaagccttcccaactacaagcacatact
ccagccagtcagcagactcccccactcccaccatacgcgtccccacgttctccacctgtc
cagcctcatacaccagtgacaatctcgttgggaacagccccgcccttgcagaacaatcag
cctgtggagtttaaccatgccatcaactatgttaataagatcaagaacaggttccagggc
caaccagacatctacaaagcgttcctggagattttgcacacatatcagaaagagcagcga
aatgccaaggaagctggaggaaactacactccagcgttgactgagcaggaggtgtatgcc
caggtggctcgtctttttaaaaatcaggaagatctgttgtcagaatttggacagttccta
ccagatgccaacagctctgtgcttttaagcaaaacaactgctgagaaggtcgattccgtg
agaaatgaccacggaggcacggtgaagaaacctcagctgaacaacaagccgcagaggccc
agccagaatggctgccagattcgcaggcactctggaacgggggccacccctccagtgaag
aagaaacccaaattgctcagcctcaaagattcttctatggcagatgccagcaagcatggt
gtaggaacagaatcattattttttgataaggtccgaaaggctctgcggagtgcagaggcc
tatgaaaatttcctgcgctgtcttgttatctttaaccaggaggtgatctctcgggcagag
cttgttcagttagtctctccattcctggggaaattcccagaattgtttaattggtttaaa
aacttcctgggctataaggagtctgtacatctggaaacctttccaaaggaacgggccaca
gagggcattgccatggagatagattatgcctcttgtaaacggttgggctccagctatcga
gccctaccaaagagttaccagcagcccaaatgtacaggacggactcctctctgtaaagag
gttttaaatgatacctgggtttccttcccctcctggtctgaggactccacctttgttagt
tccaagaaaactcagtatgaagaacatatctatcgttgtgaagatgaacgttttgagctt
gatgtagttttagagaccaatctggcaactatccgggttctggaagcaatacagaagaaa
ctttcccgcttgtctgctgaagaacaagccaaatttcgcttggacaacaccctcgggggc
acatcggaagtcatccaccgaaaagcactccaaaggatatatgctgacaaagcagctgac
atcattgatggtctgaggaagaacccttccattgccgtcccaattgtccttaaaaggttg
aagatgaaagaggaagaatggcgagaagctcagagaggctttaacaaggtgtggagagag
caaaatgagaaatactacttgaaatctctggaccaccaaggcatcaactttaaacaaaat
gacaccaaggtcctaaggtccaagagcttactcaacgagattgagagtatctatgatgag
aggcaagagcaggctacagaagaaaatgctggtgtacctgttggcccacacctttcactt
gcctatgaagacaaacagattctggaagatgctgctgctctgattatccaccacgtgaag
aggcagacaggcattcagaaggaagacaaatataaaatcaagcaaatcatgcatcatttt
attccagatctgctctttgctcagagaggtgatctctcagatgtggaggaagaggaagaa
gaagagatggatgtagatgaagccacaggggcggctaagaagcacaatggtgttgggggc
agtccccctaagtccaagctactgtttagtaacacagcagctcagaagttaagagggatg
gatgaagtgtacaacctcttctatgttaataataactggtatatctttatgcggctgcac
cagatactctgcttgaggctgctgcggatctgttcccaagctgaacggcaaattgaagaa
gaaaaccgagaaagagagtgggaacgggaagtgctgggcatcaagcgagacaagagtgac
agccctgccatccagctgcgtctcaaagaacctatggatgttgatgtagaagattattac
ccagctttcctggacatggtgcggagcctgctggatggcaacatagactcgtcccagtat
gaagattcgctgagagagatgttcaccattcatgcctacattgcctttaccatggacaaa
ctcatccagagcattgtcagacagctgcagcatatcgtgagtgatgagatctgtgtacaa
gtgactgacctgtacctggcagaaaacaataatggggccacaggaggccagctgaacaca
cagacttcaaggagcctcctggagtcaacatatcagcggaaagctgagcagctcatgtca
gatgaaaattgctttaagcttatgttcattcagagccaaggccaggttcagctgaccatt
gagcttctggacacagaagaggagaactcggatgaccctgtagaagcagagcgctggtca
gactacgtggagcgatacatgaattctgatactacctctcctgagcttcgtgagcacctg
gcacggaagccagtgtttctcccacggaatctgcggcggatccggaagtgtcagcgtggt
cgagagcagcaggaaaaggaagggaaggaaggaaacagcaagaagaccatggagaatgca
gacagcctggataaactggagtgtagattcaagctgaattcctacaagatggtatatgtg
atcaagtcagaggactacatgtatcggaggaccgccttgctgcgggctcatcagtcccat
gagcgtgtaagcaagcggctacatcagaggttccaggcctgggtagataaatggaccaag
gagcatgtgccccgtgaaatggcagcggagaccagcaagtggcttatgggtgaggggctg
gagggcctggtgccctgcaccaccacctgtgacacagagaccctgcacttcgtgagcatt
aacaagtaccgtgtcaaatatggcacagtgttcaaaaccccataa
DBGET
integrated database retrieval system
