Cervus canadensis (wapiti): 122455319
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Entry
122455319 CDS
T07554
Symbol
MEX3B
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122455319 (MEX3B)
04121 Ubiquitin system [BR:
ccad04121
]
122455319 (MEX3B)
Enzymes [BR:
ccad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122455319 (MEX3B)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122455319 (MEX3B)
Ubiquitin system [BR:
ccad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122455319 (MEX3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
RING_XB3-XBAT31
zf-C3HC4
KH_2
Prok-RING_4
KH_DEAH11_2nd
zf-RING_5
zf-P11
Motif
Other DBs
NCBI-GeneID:
122455319
NCBI-ProteinID:
XP_043346291
LinkDB
All DBs
Position
17:44260679..44265004
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AA seq
581 aa
AA seq
DB search
MPSSLFADLERNGSGGGGGGGGGGGGGGGETLDDQRALQLALDQLSLLGLDSDEGASLYD
SEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGR
KEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRVVGLVV
GPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIALRTGGIIELT
DENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSAS
TDSYFGAGTSGSAATTPRLADYSPPSPALSFAHNGNNNNGNGYTYAAAAAGEASVPSPDG
CPELPPAFDPAPAPPPGAPLLWAQFERSPGGGPAAPASSSCSSSASSSAASSSSVVFPGG
GASAPSSANLGLPVHRRLHPGASCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAY
ANGLGAQLPAGLQPSSSDASGSSSSSSSSSSSSSSSSSSSGLRRKGSRDCSVCFESEVIA
ALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcgctgtttgcagacctggagcgcaacggcagcggcggcggagggggcggc
ggcggaggaggaggaggcggcggcggagagaccctggatgaccaaagagccctgcagctc
gcactcgaccagctctccttgctggggctggacagtgacgagggcgcgtctctatacgac
agcgagccgcgaaagaagagcgtgaacatgaccgagtgcgtgccggtgcccagttccgag
catgtcgccgagatcgtggggcggcaaggttgtaaaatcaaagcgctgcgggcaaagacc
aacacttatatcaagaccccggttcgcggggaggagcctgtctttgttgtgacgggcagg
aaggaggatgtggccatggcccggagggagatcatctccgccgccgagcacttctcaatg
atccgcgcctcgcgcaataagaacacggcgctgaacggcgcagtgcccgggccgcctaac
ctgccagggcagaccaccatccaggtgcgcgtgccctatcgtgtggtggggctcgtggtg
gggcccaagggcgccacgatcaagcgcatccagcagcagacgcacacgtacatcgtgacg
cccagccgcgacaaggagccggtgttcgaggtgacgggcatgccggagaacgtggaccgc
gcccgcgaggagatcgaggcccacatcgccctgcgcaccggcggcatcattgagctcacc
gacgagaacgatttccacgccaacggcacggatgtgggcttcgatctgcatcatgggtcc
ggcgggtccggcccagggagcctctggagcaagcccacccccagcatcacgcccactccg
ggccgcaagcccttctccagctaccgcaacgacagctccagctcgctcggcagcgcctcc
acagactcttacttcggcgcgggcaccagcggcagcgcagccaccaccccgcgcctggcg
gactacagcccccccagccccgcgctcagctttgctcataacggaaacaacaacaacggc
aatggatacacctacgcggcggctgcggcgggggaggcttcggtgccttcccccgacggc
tgccccgagctaccgccagcctttgacccggctcccgctccaccgcccggggcgcccctt
ctctgggcccagttcgagcggtccccgggaggcggacctgcagctcccgcgtcctcttcc
tgctcctcctccgcatcttcgtccgctgcttcgtcctcctcggtggtctttcccgggggc
ggagccagcgcgccctccagcgccaacctggggctgccggtgcaccgccggctgcaccca
ggcgccagctgcccgcgtctgtccccgcccttgcacatggccccgggggcgggcgagcac
cacctggctcgtcgtgtgcgcagcgaccctggcggagggggcctggcctacgccgcctat
gccaatgggctgggggcgcagctgccggcgggccttcagccttcgtcatcggacgcgtcc
ggctcctcgtcctcgtccagctcgtcctccagctcgtcctcttcctcctcctcctcctcc
gggttgcggcgtaagggcagccgagattgctccgtgtgctttgagagcgaagtcatcgcc
gcactggtgccctgcggccacaacctcttctgcatggagtgcgctaaccgcatctgcgag
aagagcgagcccgagtgcccggtctgccacaccgcggtcactcaggccatccgcatcttt
tcgtga
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