Cyanistes caeruleus (blue tit): 111922702
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Entry
111922702 CDS
T05602
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03013
Nucleocytoplasmic transport
ccae03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111922702 (UPF3A)
03015 mRNA surveillance pathway
111922702 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111922702 (UPF3A)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111922702 (UPF3A)
mRNA cycle factors
P-body specific factors
111922702 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
DUF5427
Motif
Other DBs
NCBI-GeneID:
111922702
NCBI-ProteinID:
XP_023774009
LinkDB
All DBs
Position
1
AA seq
362 aa
AA seq
DB search
MIILSFALLIPGLEYPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRKFLDNYCADEE
KICANPEILLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKKRL
REEEKRKRREEERRKRKEVEKQKKISEKEIRIKLLKKPEKGDELASEKHKEKGEEADTEE
NKWDKSPGSGSIKCKSLESSLKELKEKSQNDSDKEQRDLERRFREKEPERQRYRLDDGRK
HRTHYEFDKFMRRSEEELKWGKGYNQDKGKKGNYNYSFTVEAVDKLGKEDKCDDMASKKE
RIRNKDRPAMQLYQPGARIRTHVGPTSKTYDCSGKSFEDAFDKKCEADNSAGGSSEKVEE
AE
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgattattttgagttttgcactgctgatcccaggtttggaatatcctgcagtggttgag
tttgctccattccagaagatttcaaaaaaaaagctgaagaagaaagatgccaaagctggg
agcattgaagatgatccagaatataggaaatttttagacaattattgtgctgatgaagag
aagatctgtgccaatcctgagattcttttgggagagattgaggccaaaacaagggaactc
attgctagaagaacaacaccccttttggaatatattaaaaatagaaaattagaaaagcag
agaatacgagaagagaaaagagaagaacgaaggcggagagaattggagaagaagcgtttg
cgggaggaagagaaaaggaagcgcagagaagaagaaagacgtaaaagaaaagaagtggag
aagcaaaagaagatttctgaaaaagaaataaggatcaagcttctcaagaagcctgaaaaa
ggagatgaactggccagtgaaaagcacaaagaaaaaggtgaagaagctgacactgaggaa
aacaaatgggataagtcacctggatctgggagtataaaatgcaaatctttggagagttca
ctaaaagaacttaaggaaaagtcacaaaatgatagtgacaaagagcaaagagatttggag
agaagatttcgagaaaaagaacctgaaagacaaaggtatcgattggatgatggcagaaag
catagaactcactatgagtttgacaagtttatgaggaggagtgaagaagagctgaaatgg
gggaaaggatacaaccaagacaaaggaaagaaagggaactacaactacagcttcactgtg
gaggcagtagacaaactgggtaaagaggacaagtgtgatgacatggcatccaaaaaggag
cgcataagaaataaggatcgtccagccatgcagttgtaccagccaggagctcgcatccga
acacatgtgggacctacaagtaaaacctatgactgcagtgggaaatcctttgaagatgct
tttgataaaaagtgtgaggcagataattcagccggaggtagttctgaaaaggttgaagaa
gcagaataa
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integrated database retrieval system
