Cyanistes caeruleus (blue tit): 111922729
Help
Entry
111922729 CDS
T05602
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04510
Focal adhesion
ccae04512
ECM-receptor interaction
ccae04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111922729 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111922729 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
111922729 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccae04147
]
111922729 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
ccae00536
]
111922729 (COL4A2)
Exosome [BR:
ccae04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111922729 (COL4A2)
Glycosaminoglycan binding proteins [BR:
ccae00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111922729 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111922729
NCBI-ProteinID:
XP_023774065
LinkDB
All DBs
Position
1
AA seq
1715 aa
AA seq
DB search
MDISQLPSARIFLCQDTGLLLILMEVVLSAVQVHAGGKKYTGPCGGRDCSGGCQCFPEKG
SRGQPGLLGSQGFTGPPGLMGIPGVQGPKGHKGERGYPGITGPKGEVGQRGVTGFPGADG
IPGHPGQPGPRGKPGHDGCNGTAGDPGDPGTPGLSGFPGSIGVQGPKGQKGEPYIVAPEI
ISRHRGDPGDSGFIGFPGPPGTLGIQGPVGPRGQRGRPGPPGPPGPPGPQGNRGLGFYGE
KGEQGAPGPPGPPGLPTRELMGVPSDKHKGERGDPGPRGEAGIPGVLLFPLEKGEEGVMG
YPGQRGLPGINGFPGLSGERGFPGFDGPPGGHGPRGSKGEPGEMGPPGPDSYFPSRIPRK
GARGDPGFPGVSGLPGDRGEEGDRGLPGDPGFSDGDGDKPGLPGEMGPKGEKGEIGSPAY
FAGPPGLPGKDGSPGLRGPPGPVGAPGPLFGLKGREGAPGRFGLQGFPGPRGQKGPKGEE
GDCTRCLLGEELRRGSTGPRGPPGFPGTPGQPGRKGEPGDQGPHGLPGYPGAKGFSGPAG
FPGRKGEKGDSLHITTKGTKGIRGDPGLPGIRGEDGSPGRDGLDGLPGQPGLPGDTVRGF
PGDPGYPGELGPKGFPGEGGLPGEGFPGPKGFQGPPGDQGQAGNPGPPGLPGLPGEPGQL
DCGQVTEDFPRGDATEPIWSGAGCVRPPKGSQGKPGVPGATGAKGARGFPGDPGPMGFPG
LNGTRGDPGREGFPGPPGFTGPRGDRGPNGLPGLQGHPGLTGKSGAPGAPGPKGLPGDIF
GAAAGSRGDVGLPGFPGLKGAPGDQGVPGARGADGSPGLPGSKGDPGPQGLPGLMGLPGT
PGTHGFPGPPGNRGPDGGPGSQGPLGPPGARGEDGEQGFPGPVGLKGLSGDKGDMGHTGL
PGIRGVTGPPGISGMDGFPGDKGLTGSPGIDGFKGMTGLKGRPGIKGIKGEFGPLGARGD
KGSQGARGFKGDRGDQGPPGEPPKLMPSMMMEVKGEKGDVGERGTKGFFGLKGSKGMPGL
PGKTGTPGSPGHPSYVAGVKGDIGAKGLAGVKGYPGPAGSPGIRGFPGTTGVRGEKGVPG
ISGHFGTPGSHGEIGDRGETINLPGMPGLKGEVGVPGLTGIRGGVGPKGEGGDPGFPGIE
GLKGTQGVPGSVGQEGLPGLVGPPGQQGNPGTPGFPGEKGTPGWPGLPGQAGQPGLRGIS
GLHGLPGTKGLPGSPGPDGYGSAGFPGALGDKGEAGEPSRVEGSRGPPGQKGDRGVPGVP
GPFGIPGQEGFPGPPGISNISGYPGDKGSPGLDGVPGYPGPQGQPGIPAPPGSKGESGQA
GRTGEIGPKGSRGDPGSEGRPGLPGFPGPKGPRGEQGVIGFMGTVGFPGDLGPIGPKGDR
GVTGFQGPPGPPGPPPHPPRLVAEQGSPGPRGNIGPQGSPGDMGPPGPPGDPGFRGSPGE
PGLQGRGGIPAPPGSRGEQGGMGFQGPVGFEGQPGRPGSPGPAGMPGRSVSMGYLLVKHS
QSDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLSRFSTMPFLYCNPGDICY
YASRNDKSYWLSTTAPLPMMPVAEEDIKPYISRCSVCEAPAVAIAVHSQEASIPHCPEGW
RSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWL
TTIDQPFQSKPSGDTLKAGLIRSHISRCQVCMKNL
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggacatctctcagcttcccagtgcacgtattttcctttgtcaggacacggggcttttg
ctgatcctgatggaagttgtgctgtcggccgtccaagtgcatgctggtggaaagaaatac
acaggaccatgtggaggcagagactgcagtggaggatgtcagtgtttccctgaaaaagga
agccgtggccagccaggactccttggatcacagggattcactggaccaccaggattgatg
gggatcccaggagtgcaaggtcccaaaggtcacaaaggtgaaagaggatacccaggaata
actggacccaaaggagaagtgggacaaagaggagtcactggattccccggagcagatggc
attcctggtcatccaggccagccaggaccaagggggaaaccaggtcatgatggctgtaat
gggacagcaggtgaccctggtgacccgggaactcctggactctctggtttccctggtagc
attggagtccaagggcccaagggccagaagggagagccgtacatagtagcgccggagatc
atcagccgacacaggggagatcctggggattcagggttcattggttttccaggacctcca
ggtacactgggtattcagggacctgttggtccaagaggacagcgaggaagaccaggacca
ccaggacccccagggcccccaggaccacaaggcaacaggggccttggcttctatggagaa
aaaggtgaacagggcgccccaggtcctccaggtccacctgggcttcctacaagagaactg
atgggtgtcccctctgacaaacacaagggtgaaagaggagaccctggaccaagaggggaa
gctggaattccaggtgtacttctctttcctctcgaaaaaggtgaagaaggggtaatgggc
tacccaggacaaaggggactgcctggcataaatggctttccaggactcagtggagaaaga
ggttttccaggatttgatggtccacccggtggccatggtcccagaggaagcaagggggag
cctggtgagatgggtcctccagggccagattcctattttccttcccgcatcccaaggaaa
ggtgcaagaggtgatccaggctttccaggtgtttctggactcccaggagaccgaggagag
gagggagaccgtggattgcctggtgatcctggattttctgatggggatggggataagcca
ggcttacctggagaaatgggaccaaaaggtgaaaagggtgaaataggatctcctgcttat
tttgcggggccacctgggcttccgggtaaggatggctcaccaggacttcgtggtccacct
ggtcccgttggagcccctggtcctctctttggattaaaaggacgagagggagcaccaggt
agatttggtctacaaggtttccctgggccaagaggacaaaaaggacctaaaggtgaagaa
ggggattgcactagatgccttttgggtgaggaactcagaaggggctctactggcccccgt
ggccctcctggctttccaggaacccctggccagcctggaaggaaaggagaacctggtgat
caaggaccacatggtcttcctggctaccctggagcaaaaggattttcgggtccagctgga
tttcctggacggaaaggagaaaagggagactctttacacataaccacgaaaggcaccaaa
ggaatccgaggagatcccgggctgcctggaatcagaggtgaagatggttcaccaggcaga
gacgggttggatggtttaccaggacagcctggccttccgggtgatactgtcagaggcttc
cccggtgatcctggttatccaggtgaattaggcccaaagggctttccaggagaaggaggc
ctgccaggtgaaggatttcctggtccaaaaggcttccagggtcctccaggtgaccaagga
caagctggaaacccaggacccccaggtctgcctggtctgccaggagagcctggccaacta
gattgtgggcaagtcactgaagactttcctagaggagatgcaaccgagccaatatggtca
ggtgcaggctgtgtaaggccaccaaagggatcccaaggaaagccaggagtgccaggagcc
acaggtgcaaaaggtgcaagaggattcccaggtgatccgggtccaatgggtttcccaggg
ctaaatggtacacgaggtgatccaggtcgggaaggattcccaggtcctccaggttttact
ggacccaggggagacagaggcccaaatggtctacctggactgcagggacacccaggcctt
acaggaaaatccggagctccaggagcaccaggaccgaagggccttcctggtgacattttt
ggagcagcagcaggatcccgaggggatgtcggtctccccggcttcccagggttgaaaggt
gcaccaggagatcaaggagtaccaggagctagaggagcggatggtagccctggtttgcca
ggatccaaaggagatccaggtccacaaggtctccctggtttgatgggattaccaggaaca
ccaggaacacatggattcccaggtccaccaggaaaccgtgggccagacggtgggcctggc
tctcaaggacctctcggtccacctggtgctagaggagaagatggtgagcaaggttttcct
ggccctgtgggcctgaagggtctgtctggtgacaaaggtgacatgggtcacacgggatta
ccgggtatacgtggtgtgaccgggccccctggcataagtggaatggatggctttccagga
gataaaggtttgacaggttcacctggcattgatggtttcaaaggcatgacaggcctaaaa
ggaagaccaggcatcaagggaatcaaaggagaatttggcccacttggggctcgaggagat
aaaggctcacagggtgcacgtggtttcaaaggtgaccgtggagatcaaggccccccagga
gaacctccaaagctcatgcccagcatgatgatggaagttaaaggtgaaaaaggagatgtt
ggagaaaggggcacgaagggattctttggcttaaaaggtagcaagggaatgccaggcctt
cccggaaagacaggaaccccaggctcccctgggcatcccagctatgtggctggtgtgaaa
ggagacatcggtgcgaaagggctggcaggtgtgaaaggatatcctggtcccgctggttct
cctggcatcagaggcttccctggcaccacaggagtcagaggagaaaagggcgttccagga
atttcaggccattttggtactcctggctcacatggagaaataggtgatcggggagagact
ataaacttaccaggaatgccaggccttaaaggagaagttggtgtgccaggcttaacaggc
ataagaggaggtgtgggaccaaaaggagaaggtggtgatcctggtttccctggcattgaa
ggtctcaagggcacgcagggtgtccctggctctgtgggacaggaaggtttgccaggactg
gttggccccccagggcaacaaggaaaccctgggacacctggatttccaggtgaaaaggga
actcccggctggccaggcttaccaggacaagcaggccagcctggcttaagaggaatcagt
ggactgcatggtttaccaggcactaagggcttaccaggatcaccaggtccagatgggtac
ggctctgcaggtttcccaggtgcactgggtgacaaaggagaagcgggagagccaagcaga
gtagaaggcagccgaggacctccaggacagaagggagacagaggtgttccaggagtccca
ggaccctttggtattcctgggcaggaaggatttccagggcctcctgggatttcaaatata
tcaggatatcctggtgataaaggctccccaggtctagatggagttccaggctatccagga
ccacaggggcagcctggaatacctgctccaccaggaagcaaaggagaaagtggacaagca
ggtaggactggagaaattggcccaaaaggaagcagaggtgaccctggatcagaaggaaga
cctggcctgcctggattccctggaccaaaaggtcctaggggtgaacaaggtgtcattggc
tttatgggcacagtaggatttccaggtgatctgggacccatcggacccaagggagataga
ggagtaactggcttccagggacctccaggccctcctgggccaccccctcatcctccaagg
ctggttgctgagcaaggttcaccaggtccccgtggaaatataggacctcagggaagccca
ggagatatgggacctccaggcccaccaggagatccaggtttcagaggctcacctggagag
cctggactccaaggcaggggtggcattccagctcctcctggctccagaggggaacaagga
ggaatgggatttcagggtccggtgggatttgaaggtcagccgggccgccccggtagccct
gggccagcaggcatgccgggccgcagtgtcagcatgggctacctgctggtgaagcacagc
cagtccgaccaagagccaatgtgcccagttggcatgaacaaactctggagtggatacagc
ctactgtattttgaaggacaagagaaagcacacaaccaggatctagggctggctggctcg
tgtttgtcccgttttagcaccatgccattcctctactgtaaccctggggacatttgttat
tatgcaagtcgaaatgataaatcctactggctctcaaccacagcacctctcccaatgatg
cccgtggcagaagaagacattaagccgtatatcagtcgctgctccgtttgtgaggcccca
gctgtggcaattgctgtccacagccaagaagcttctattcctcactgccctgaaggctgg
cgcagtttgtggatcggatattccttcctcatgcacactgctgctggtgatgaaggtgga
ggacagtcactggtttctcctggaagctgcctggaagatttcagggcgactcctttcatc
gaatgcaacggcgcacgcggaacctgtcactactttgcaaacaaatacagcttctggctc
accacgatcgaccagcccttccaaagcaagccctcgggagacacactcaaggcaggactc
atccgaagccatatcagcagatgtcaagtctgtatgaaaaacttatag
DBGET
integrated database retrieval system
