Cyanistes caeruleus (blue tit): 111922729
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Entry
111922729 CDS
T05602
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04382
Cornified envelope formation
ccae04510
Focal adhesion
ccae04512
ECM-receptor interaction
ccae04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111922729 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111922729 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
111922729 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111922729 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccae04147
]
111922729 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
ccae00536
]
111922729 (COL4A2)
Exosome [BR:
ccae04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111922729 (COL4A2)
Glycosaminoglycan binding proteins [BR:
ccae00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111922729 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111922729
NCBI-ProteinID:
XP_023774065
LinkDB
All DBs
Position
1
AA seq
1715 aa
AA seq
DB search
MDISQLPSARIFLCQDTGLLLILMEVVLSAVQVHAGGKKYTGPCGGRDCSGGCQCFPEKG
SRGQPGLLGSQGFTGPPGLMGIPGVQGPKGHKGERGYPGITGPKGEVGQRGVTGFPGADG
IPGHPGQPGPRGKPGHDGCNGTAGDPGDPGTPGLSGFPGSIGVQGPKGQKGEPYIVAPEI
ISRHRGDPGDSGFIGFPGPPGTLGIQGPVGPRGQRGRPGPPGPPGPPGPQGNRGLGFYGE
KGEQGAPGPPGPPGLPTRELMGVPSDKHKGERGDPGPRGEAGIPGVLLFPLEKGEEGVMG
YPGQRGLPGINGFPGLSGERGFPGFDGPPGGHGPRGSKGEPGEMGPPGPDSYFPSRIPRK
GARGDPGFPGVSGLPGDRGEEGDRGLPGDPGFSDGDGDKPGLPGEMGPKGEKGEIGSPAY
FAGPPGLPGKDGSPGLRGPPGPVGAPGPLFGLKGREGAPGRFGLQGFPGPRGQKGPKGEE
GDCTRCLLGEELRRGSTGPRGPPGFPGTPGQPGRKGEPGDQGPHGLPGYPGAKGFSGPAG
FPGRKGEKGDSLHITTKGTKGIRGDPGLPGIRGEDGSPGRDGLDGLPGQPGLPGDTVRGF
PGDPGYPGELGPKGFPGEGGLPGEGFPGPKGFQGPPGDQGQAGNPGPPGLPGLPGEPGQL
DCGQVTEDFPRGDATEPIWSGAGCVRPPKGSQGKPGVPGATGAKGARGFPGDPGPMGFPG
LNGTRGDPGREGFPGPPGFTGPRGDRGPNGLPGLQGHPGLTGKSGAPGAPGPKGLPGDIF
GAAAGSRGDVGLPGFPGLKGAPGDQGVPGARGADGSPGLPGSKGDPGPQGLPGLMGLPGT
PGTHGFPGPPGNRGPDGGPGSQGPLGPPGARGEDGEQGFPGPVGLKGLSGDKGDMGHTGL
PGIRGVTGPPGISGMDGFPGDKGLTGSPGIDGFKGMTGLKGRPGIKGIKGEFGPLGARGD
KGSQGARGFKGDRGDQGPPGEPPKLMPSMMMEVKGEKGDVGERGTKGFFGLKGSKGMPGL
PGKTGTPGSPGHPSYVAGVKGDIGAKGLAGVKGYPGPAGSPGIRGFPGTTGVRGEKGVPG
ISGHFGTPGSHGEIGDRGETINLPGMPGLKGEVGVPGLTGIRGGVGPKGEGGDPGFPGIE
GLKGTQGVPGSVGQEGLPGLVGPPGQQGNPGTPGFPGEKGTPGWPGLPGQAGQPGLRGIS
GLHGLPGTKGLPGSPGPDGYGSAGFPGALGDKGEAGEPSRVEGSRGPPGQKGDRGVPGVP
GPFGIPGQEGFPGPPGISNISGYPGDKGSPGLDGVPGYPGPQGQPGIPAPPGSKGESGQA
GRTGEIGPKGSRGDPGSEGRPGLPGFPGPKGPRGEQGVIGFMGTVGFPGDLGPIGPKGDR
GVTGFQGPPGPPGPPPHPPRLVAEQGSPGPRGNIGPQGSPGDMGPPGPPGDPGFRGSPGE
PGLQGRGGIPAPPGSRGEQGGMGFQGPVGFEGQPGRPGSPGPAGMPGRSVSMGYLLVKHS
QSDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLSRFSTMPFLYCNPGDICY
YASRNDKSYWLSTTAPLPMMPVAEEDIKPYISRCSVCEAPAVAIAVHSQEASIPHCPEGW
RSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWL
TTIDQPFQSKPSGDTLKAGLIRSHISRCQVCMKNL
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggacatctctcagcttcccagtgcacgtattttcctttgtcaggacacggggcttttg
ctgatcctgatggaagttgtgctgtcggccgtccaagtgcatgctggtggaaagaaatac
acaggaccatgtggaggcagagactgcagtggaggatgtcagtgtttccctgaaaaagga
agccgtggccagccaggactccttggatcacagggattcactggaccaccaggattgatg
gggatcccaggagtgcaaggtcccaaaggtcacaaaggtgaaagaggatacccaggaata
actggacccaaaggagaagtgggacaaagaggagtcactggattccccggagcagatggc
attcctggtcatccaggccagccaggaccaagggggaaaccaggtcatgatggctgtaat
gggacagcaggtgaccctggtgacccgggaactcctggactctctggtttccctggtagc
attggagtccaagggcccaagggccagaagggagagccgtacatagtagcgccggagatc
atcagccgacacaggggagatcctggggattcagggttcattggttttccaggacctcca
ggtacactgggtattcagggacctgttggtccaagaggacagcgaggaagaccaggacca
ccaggacccccagggcccccaggaccacaaggcaacaggggccttggcttctatggagaa
aaaggtgaacagggcgccccaggtcctccaggtccacctgggcttcctacaagagaactg
atgggtgtcccctctgacaaacacaagggtgaaagaggagaccctggaccaagaggggaa
gctggaattccaggtgtacttctctttcctctcgaaaaaggtgaagaaggggtaatgggc
tacccaggacaaaggggactgcctggcataaatggctttccaggactcagtggagaaaga
ggttttccaggatttgatggtccacccggtggccatggtcccagaggaagcaagggggag
cctggtgagatgggtcctccagggccagattcctattttccttcccgcatcccaaggaaa
ggtgcaagaggtgatccaggctttccaggtgtttctggactcccaggagaccgaggagag
gagggagaccgtggattgcctggtgatcctggattttctgatggggatggggataagcca
ggcttacctggagaaatgggaccaaaaggtgaaaagggtgaaataggatctcctgcttat
tttgcggggccacctgggcttccgggtaaggatggctcaccaggacttcgtggtccacct
ggtcccgttggagcccctggtcctctctttggattaaaaggacgagagggagcaccaggt
agatttggtctacaaggtttccctgggccaagaggacaaaaaggacctaaaggtgaagaa
ggggattgcactagatgccttttgggtgaggaactcagaaggggctctactggcccccgt
ggccctcctggctttccaggaacccctggccagcctggaaggaaaggagaacctggtgat
caaggaccacatggtcttcctggctaccctggagcaaaaggattttcgggtccagctgga
tttcctggacggaaaggagaaaagggagactctttacacataaccacgaaaggcaccaaa
ggaatccgaggagatcccgggctgcctggaatcagaggtgaagatggttcaccaggcaga
gacgggttggatggtttaccaggacagcctggccttccgggtgatactgtcagaggcttc
cccggtgatcctggttatccaggtgaattaggcccaaagggctttccaggagaaggaggc
ctgccaggtgaaggatttcctggtccaaaaggcttccagggtcctccaggtgaccaagga
caagctggaaacccaggacccccaggtctgcctggtctgccaggagagcctggccaacta
gattgtgggcaagtcactgaagactttcctagaggagatgcaaccgagccaatatggtca
ggtgcaggctgtgtaaggccaccaaagggatcccaaggaaagccaggagtgccaggagcc
acaggtgcaaaaggtgcaagaggattcccaggtgatccgggtccaatgggtttcccaggg
ctaaatggtacacgaggtgatccaggtcgggaaggattcccaggtcctccaggttttact
ggacccaggggagacagaggcccaaatggtctacctggactgcagggacacccaggcctt
acaggaaaatccggagctccaggagcaccaggaccgaagggccttcctggtgacattttt
ggagcagcagcaggatcccgaggggatgtcggtctccccggcttcccagggttgaaaggt
gcaccaggagatcaaggagtaccaggagctagaggagcggatggtagccctggtttgcca
ggatccaaaggagatccaggtccacaaggtctccctggtttgatgggattaccaggaaca
ccaggaacacatggattcccaggtccaccaggaaaccgtgggccagacggtgggcctggc
tctcaaggacctctcggtccacctggtgctagaggagaagatggtgagcaaggttttcct
ggccctgtgggcctgaagggtctgtctggtgacaaaggtgacatgggtcacacgggatta
ccgggtatacgtggtgtgaccgggccccctggcataagtggaatggatggctttccagga
gataaaggtttgacaggttcacctggcattgatggtttcaaaggcatgacaggcctaaaa
ggaagaccaggcatcaagggaatcaaaggagaatttggcccacttggggctcgaggagat
aaaggctcacagggtgcacgtggtttcaaaggtgaccgtggagatcaaggccccccagga
gaacctccaaagctcatgcccagcatgatgatggaagttaaaggtgaaaaaggagatgtt
ggagaaaggggcacgaagggattctttggcttaaaaggtagcaagggaatgccaggcctt
cccggaaagacaggaaccccaggctcccctgggcatcccagctatgtggctggtgtgaaa
ggagacatcggtgcgaaagggctggcaggtgtgaaaggatatcctggtcccgctggttct
cctggcatcagaggcttccctggcaccacaggagtcagaggagaaaagggcgttccagga
atttcaggccattttggtactcctggctcacatggagaaataggtgatcggggagagact
ataaacttaccaggaatgccaggccttaaaggagaagttggtgtgccaggcttaacaggc
ataagaggaggtgtgggaccaaaaggagaaggtggtgatcctggtttccctggcattgaa
ggtctcaagggcacgcagggtgtccctggctctgtgggacaggaaggtttgccaggactg
gttggccccccagggcaacaaggaaaccctgggacacctggatttccaggtgaaaaggga
actcccggctggccaggcttaccaggacaagcaggccagcctggcttaagaggaatcagt
ggactgcatggtttaccaggcactaagggcttaccaggatcaccaggtccagatgggtac
ggctctgcaggtttcccaggtgcactgggtgacaaaggagaagcgggagagccaagcaga
gtagaaggcagccgaggacctccaggacagaagggagacagaggtgttccaggagtccca
ggaccctttggtattcctgggcaggaaggatttccagggcctcctgggatttcaaatata
tcaggatatcctggtgataaaggctccccaggtctagatggagttccaggctatccagga
ccacaggggcagcctggaatacctgctccaccaggaagcaaaggagaaagtggacaagca
ggtaggactggagaaattggcccaaaaggaagcagaggtgaccctggatcagaaggaaga
cctggcctgcctggattccctggaccaaaaggtcctaggggtgaacaaggtgtcattggc
tttatgggcacagtaggatttccaggtgatctgggacccatcggacccaagggagataga
ggagtaactggcttccagggacctccaggccctcctgggccaccccctcatcctccaagg
ctggttgctgagcaaggttcaccaggtccccgtggaaatataggacctcagggaagccca
ggagatatgggacctccaggcccaccaggagatccaggtttcagaggctcacctggagag
cctggactccaaggcaggggtggcattccagctcctcctggctccagaggggaacaagga
ggaatgggatttcagggtccggtgggatttgaaggtcagccgggccgccccggtagccct
gggccagcaggcatgccgggccgcagtgtcagcatgggctacctgctggtgaagcacagc
cagtccgaccaagagccaatgtgcccagttggcatgaacaaactctggagtggatacagc
ctactgtattttgaaggacaagagaaagcacacaaccaggatctagggctggctggctcg
tgtttgtcccgttttagcaccatgccattcctctactgtaaccctggggacatttgttat
tatgcaagtcgaaatgataaatcctactggctctcaaccacagcacctctcccaatgatg
cccgtggcagaagaagacattaagccgtatatcagtcgctgctccgtttgtgaggcccca
gctgtggcaattgctgtccacagccaagaagcttctattcctcactgccctgaaggctgg
cgcagtttgtggatcggatattccttcctcatgcacactgctgctggtgatgaaggtgga
ggacagtcactggtttctcctggaagctgcctggaagatttcagggcgactcctttcatc
gaatgcaacggcgcacgcggaacctgtcactactttgcaaacaaatacagcttctggctc
accacgatcgaccagcccttccaaagcaagccctcgggagacacactcaaggcaggactc
atccgaagccatatcagcagatgtcaagtctgtatgaaaaacttatag
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integrated database retrieval system
