Cyanistes caeruleus (blue tit): 111923155
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Entry
111923155 CDS
T05602
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccae03009
]
111923155
Enzymes [BR:
ccae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111923155
Ribosome biogenesis [BR:
ccae03009
]
Eukaryotic type
90S particles
Helicases
111923155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
REV
Motif
Other DBs
NCBI-GeneID:
111923155
NCBI-ProteinID:
XP_023774618
LinkDB
All DBs
Position
1
AA seq
843 aa
AA seq
DB search
MRMRIRMKSGGHNQGQIQSFMTGHVHSDKAGPRSSQEVILQLCVPASGVYGQGFMSVMTH
RPLLLFCYERDEPYRQNTDQFPPVTNEQIKHLQSCHRTLPPDSRSRVLTLALRPSVQERH
GPVGMSPGEAMKDKKECVFSLLRHELIFLGCTPHTPTSLQHPHHLSAPAERGPGRAGPGG
GAARVTRXAGTAAEEEGPVAALVEVTLDRLWSRGQWDPRAGEFVVRRAARRRRRRRRLKQ
VVGKINASEIQRFSDFPLSKKTLKGLQEAQYRVVTEIQRQTIGLALQGKDVLGAAKTGSG
KTLAFIVPALELLYRQQWTSADGLGVLIISPTRELAYQTFKVLRKVGKNHEFSAGLIIGG
KDLKEESERIHHINMLICTPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNA
IIENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLDQNYVVCELQ
QKVNMLYSFLRTHLKKKSIVFFASCKEVQYLFRVFCKLQPGLPVLALHGKQQQMKRMEVY
TCFVRKKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEGGEALLV
LLPSEEKGMVEQLAQRKVPISEIKINPEKLTDIQKRMQAFLAQDQELKEKAQRCFVSYLR
SVYLMKNKEVFDVFKLPLAEYALSLGLAMAPRVRFLQRVQKQLYVNEAANGTDHLEETEQ
NENTLTLVNEETVEKCGTSFSGETSVNKTKEKQRRKETEECSASSGSAEESGESEDESKE
LSGEEEKEIHVPNRLPNSDSMQFFEDDDDDDEDDTEGLDLLTVKQRDVFGVAAKDNPAPV
SAL
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgaggattaggatgaagtctggtggccataatcagggtcagatacagtcattc
atgactgggcatgtccacagtgacaaagcaggaccgagatcaagccaggaagtcattctg
cagctctgtgtcccagccagtggggtctatggccaaggatttatgtctgtcatgactcac
agaccactgctgctgttctgctatgaaagagatgagccctacaggcaaaacacagaccag
tttccccctgtaacgaatgagcaaataaagcatttacagtcttgccacagaactcttcct
cctgattccagatccagagtactcactctagccctgcggccctcagtacaagaaagacat
ggacctgttggaatgagtccaggggaggccatgaaagataagaaagagtgcgtattttcc
ttgctgcggcacgaactcattttcctgggctgtactccacacaccccgacttccctccag
cacccgcaccacctttcagctccggcggagcgcgggccgggccgggcggggcctggtggc
ggcgcggcccgagtgacgcgctnggcgggcacggcggcagaagaggaggggccagttgct
gctttggtggaggtgactttggataggctgtggagccgggggcagtgggaccctcgggcg
ggggagttcgtggtcaggagggcagcgaggaggaggaggaggaggaggaggctgaagcag
gtggtgggaaagataaatgcaagtgaaatccaaagattttcagattttccgttgtcaaag
aagacccttaaaggactgcaggaagctcagtatcgtgtggtaacagagatacagaggcaa
accataggtttggctttacaaggtaaagatgtacttggagctgcaaagactggatcgggc
aaaacgttggcttttattgttccagctttggaactcctgtatcgccagcagtggacttca
gctgatggcctgggggttttgataatatcgcctacccgggagcttgcgtatcaaaccttc
aaggttctgcgtaaagtggggaagaatcatgaattctcagctggccttatcattggagga
aaggatctgaaagaagagtctgaaagaatccatcacataaatatgctaatttgcactcca
ggacggcttttacaacacatggatgaaacttcctatttctatgcatctgatctacaaatg
ttgattcttgatgaagctgacagaattctagacatggggtttgctgatacaatgaatgca
atcatagaaaatctgcctaagaaacgccagaccttgcttttttctgcaacacaaacaaaa
tccgtgaaggatcttgcacggctgagtctgaaagatccagaatatgtttgggttcatgag
aaagccaaattcagtacaccagcaactttggatcagaactatgttgtctgtgagcttcag
caaaaagtaaacatgttatactctttcctgagaactcatttgaaaaagaagagcatcgtg
ttctttgcaagctgtaaagaggttcagtatctgttcagagtgttttgtaagcttcagcct
ggtcttcctgtcctggcactccatggcaagcagcagcagatgaagagaatggaagtctac
acttgttttgttcggaaaaaggcagcagtgcttttcgctacagatattgcagctcgtggc
ctggattttccagcagtgaattgggtcattcagtttgattgtccagaagatgcaaacacg
tatatccacagagtgggaagaacagccaggtacaaagaaggtggtgaagctttgttggta
ttgcttccttcagaagaaaaaggcatggtggaacagctggctcagaggaaggtacctatc
agtgaaatcaaaattaatcctgaaaaacttacagacatccaaaagaggatgcaagcgttc
ttagctcaagatcaggagttaaaagagaaagctcaaaggtgttttgtatcctacttgcgt
tcagtttacttaatgaagaataaggaagtattcgatgttttcaaattgcctctagcagaa
tatgccctatcacttggtcttgcaatggcacctcgtgtgagattccttcaaagagttcag
aagcaactgtatgtgaatgaggcagccaatgggacagaccacttggaggagacagagcaa
aatgagaataccctgaccttggtaaatgaggaaacagtggagaaatgtggaactagtttc
agtggagaaacatctgttaataaaacaaaggaaaagcagagaagaaaagaaactgaggaa
tgttctgcttccagtggaagtgctgaggaaagtggcgagtctgaggatgagtcgaaagag
ctgtctggggaggaggaaaaagagattcatgtacctaacaggctaccaaactcagactcc
atgcagttctttgaagatgatgacgatgatgatgaagatgatactgaaggtcttgatttg
ctgacagtgaaacaacgggatgtttttggagtggcagctaaagataatccggcaccggta
agtgctttatag
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