Cyanistes caeruleus (blue tit): 111923381
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Entry
111923381 CDS
T05602
Symbol
DIS3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111923381 (DIS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111923381 (DIS3)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
111923381 (DIS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Dis3l2_C_term
Toxin_R_bind_C
ASPRs
Motif
Other DBs
NCBI-GeneID:
111923381
NCBI-ProteinID:
XP_023775252
LinkDB
All DBs
Position
1
AA seq
893 aa
AA seq
DB search
TILINFHFVPQIDILEDPVIKNVIVLQTVLQEVRNRSAPVYKRIRDVIQNPEKHFYSFTN
EHHRETYIEQERGETSNDRNDRAIRVAVKWYNEHLKKIEEEEKIQVIFLTNDRINKEKAL
EEGITAYTCEEYIKSLTANPELVDRLACVSDEGKEIEGGKIIFPEHIPLSKLQQGIKSGI
YLQGTYRANRENYLEATVWVHGDAEENKEIIVQGLKHLNRAIHEDVVAVELLAKDEWVAP
SSVVLQDDGQNEEDIENEEEKENILKTSINKDMMRPTGRVVGIIKRNWRPYCGMLSKSQI
KEARRHLFTPADRRIPRIRIETRQADTLEGQRIIVAIDGWPRNSRYPNGHFVKNLGSAGD
KETETEVLLLEHDVPHQAFSQAVLSFLPKMPWSITEEDMKHREDLRHLNVCSVDPPGCTD
IDDALHCREIGNGNLEVGVHIADVSHFIRPGNALDEESVKRGTTVYLCEKRIDMVPELLS
SNLCSLRSNVDRLAFSCIWEMNHEAEILKTRFTKSVINSKASLTYAEAQMRIDSATMNDD
ITNSLRGLNRLAKILKKKRIDNGALTLASPEVRFHMDSETHDPIDLQTKELKETNSMVEE
FMLLANISVAQKIYDEFPEFALLRKHPAPPPSNYDILVKAAKSKNLEIKTDSAKALAESL
DKAESPAFPYLNTLLRILTTRCMMQAVYFCSGMDNDFHHYGLASPIYTHFTSPIRRYADI
IVHRLLAVAIGADSTYPELTDKHKLAEMCKNLNYRHKMAQYAQRASVAFHTQLFFKTKGV
VNEDAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPAPKLEYNSEVPSLTVEDTTLHMFD
KVKVNIMLDDSNIQHQKMRMVLVEPKINDVPAHLSAEASSKDEPEKKKKKLQK
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
acaattttgattaatttccattttgtccctcagattgatatccttgaagatcctgttatt
aagaatgtcattgtgctgcagacagtccttcaagaagtcaggaatcggagcgcgccagtg
tacaagcgaattagggacgtgattcaaaacccagaaaaacatttctattctttcaccaat
gagcaccacagagaaacgtacatagagcaagagcggggagaaacttctaatgaccgcaat
gacagagccattcgggtagcagtgaaatggtacaatgaacacttgaagaaaatagaggaa
gaggaaaagattcaagttatcttcttaacaaatgacagaattaataaagagaaagctttg
gaggaaggaataactgcttatacgtgtgaggagtatataaaaagcttgacagcaaatcct
gagcttgtagatcgtcttgcttgtgtatctgatgaagggaaagaaatagaaggtggaaaa
atcatattcccagaacatattcctcttagcaaattgcagcaaggaataaaatctggtatt
tacctccaaggaacttacagggcaaacagagagaattatcttgaagctactgtttgggtt
catggagatgctgaagaaaacaaagagataattgtacagggactgaaacacttgaatcga
gcaattcatgaagatgttgtagctgtggagctgttggcaaaagatgaatgggtggcacca
tcctcagtggtcttgcaagatgatggccagaatgaagaggacattgaaaatgaagaggaa
aaagaaaacattctgaagacttccattaacaaggatatgatgaggcccacaggaagagta
gtgggcattataaaacgaaactggcggccgtactgtgggatgctttccaagtcacagatt
aaagaggcaaggcgccatttatttacaccagctgatcgcagaattcctcgaattcgaata
gaaaccagacaagcagatacactggaagggcaaagaatcattgttgctattgatggttgg
cccaggaattccaggtatcctaatggtcattttgtaaagaatttgggaagcgctggagat
aaagagacagagacagaagttcttctgcttgaacatgatgtccctcaccaggctttttcc
caggctgtccttagtttcctaccaaaaatgccatggagcattacagaagaggatatgaaa
cacagggaggacttaaggcatctgaatgtttgtagtgttgatcctcctggttgtacagat
attgatgatgcattacattgtagagaaataggaaatggaaatctagaggttggtgtacat
attgcagatgtcagtcattttattcgcccaggaaatgctttggatgaggagtcagtaaaa
agaggaacaacagtgtatctgtgtgaaaaaaggattgatatggttccagagctccttagt
tccaacttgtgctctctgagatctaatgtggacaggcttgcattttcatgcatatgggaa
atgaatcatgaggctgaaattctaaaaaccagatttacaaagagtgttattaattccaag
gcttctcttacctatgctgaagcacagatgagaatagattcagcaactatgaatgatgat
attactaacagcctacgtggactaaacagattagcaaaaatcttgaagaagaaaagaatt
gataatggagccttgacacttgcatcaccagaggttcgtttccacatggacagtgaaact
catgatcctattgacctgcagacaaaggagctcaaagagacaaattccatggttgaagag
ttcatgttgcttgccaatatttctgtagcacaaaaaatttatgatgagttcccagagttt
gccttgctccggaaacatcccgctcctcccccatcaaattatgacatccttgtgaaggct
gctaagtccaagaatttggaaattaagacagattcagcaaaggctttagctgaatcatta
gacaaagctgaatctcctgcattcccctacctaaacacactgctgcgaattttgaccact
cgctgcatgatgcaagctgtttacttctgctcgggaatggataatgattttcatcactat
ggtttagcttcacctatttatactcactttacctcacctattagaaggtatgctgatatc
atagtccatcggcttttggcagtggccataggagcagacagtacttacccagaactcaca
gataaacacaaactggcagagatgtgtaaaaatctcaattatcgacataaaatggcacag
tatgcacaaagagcctctgtggcattccatacgcagctgttcttcaaaaccaagggagta
gtaaatgaagatgcatatatattatttgtaagaaaaaatgcgattgtggttctgattccc
aagtatgggttagaaggaacagtcttctttgaagaaaaagacaaaccagcaccaaaactg
gagtacaacagtgaggtgccatcacttactgtggaagacacaacattacatatgtttgat
aaagttaaagtgaacattatgttagatgattccaacatccaacatcagaaaatgcggatg
gtcttggtagaacccaagataaatgatgtgcctgcacatctctctgcagaggcaagcagc
aaggatgaaccagagaaaaagaaaaagaaactacaaaaatag
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