Cyanistes caeruleus (blue tit): 111923538
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Entry
111923538 CDS
T05602
Symbol
COL6A6
Name
(RefSeq) collagen alpha-6(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04510
Focal adhesion
ccae04512
ECM-receptor interaction
ccae04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111923538 (COL6A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111923538 (COL6A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
111923538 (COL6A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccae04147
]
111923538 (COL6A6)
00536 Glycosaminoglycan binding proteins [BR:
ccae00536
]
111923538 (COL6A6)
Exosome [BR:
ccae04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111923538 (COL6A6)
Glycosaminoglycan binding proteins [BR:
ccae00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111923538 (COL6A6)
Hyaluronan
Extracellular matrix or blood plasma proteins
111923538 (COL6A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
Kunitz_BPTI
VWA_2
Motif
Other DBs
NCBI-GeneID:
111923538
NCBI-ProteinID:
XP_023775084
LinkDB
All DBs
Position
2
AA seq
1181 aa
AA seq
DB search
METFSRLGPLRTLGSWRTDTICSLECIIDLSIAIDISRSMQPSSTMLLKQRLQAFLPRLL
LQMKSLPNTSCNAPVDIGFKFQVLAQNKQLIFDSGFEDYNEEIIQKFLDTQSTVDTYMNA
DFLQALEENFFNATSAKVKVLLVFSDGLDDSPEDLKKAADSLRFKGLDALLLVGLDNTQN
LTEFWEIEFGRGFGYNEPLSVGFEDIANILQRNLDTVAERKCCKVICKCLGESGDHGVRG
NPGRKGSSGYRGSPGHPGEEGGIGERGPAGFSGTQGDRGCPGARGHKGARGYRGTQGEHG
ESGFDGTNGEQGERGLPGPSGEKGSRGKWGRKGRRGEPGERGESGLRGDHGDPGANNNVS
GPKGEKGSLAPQGDPGPCGLQGEQGYAGLDGAAGRRGPPGIKGEKGHLGETGYTGETGLP
GPQGPRGPQGIKGPPGPQGMPGPLGSLGTPGSPGSVGKLGARGAKGEPGDPGEKGLAGPP
GQRGIPGMDGRDAYGPEGSKGAKGESGFIGHPGPEGEEGDQGIPGGEGPKGIRGRRGNTG
APGSLGDPGDQGPSGPMGAKGPVGTILMEPCELVNFTRKNCPCSSETCPAYPTEVVFALD
MSDDVTPAAFERMRNIVMLLLKTIKISESNCPTGARVSVISFNTNMHYLIRFSEFQKNNL
LLQAVQRIPLERSSGKRNIGAAMRFVARNVFKRVRQGILTRKVALFFANGPSQDDVAIST
AVLELSALDITPVVIAFSEVPNVRRAFSIDDTRRFQLFVWESQQDENLEGITYCTLCFDK
CNPRTNCEVPFSPLVQMDMDITYIMESSRSISSEEFQRAKDFVSNMLDQFVISSQPNESY
GGIRVALVQQAPRGFLPDRNQTPVALEFDLVTYSNKDLMKKHIQESVHQLEGPSAIASAL
QWTVENVFFKAPRQRKHRVIFTIVGSKTSTWDRERLREISLGAKCQGFTLFTLALGSGVS
DSQLMELSSSPTDQHSLTLGRVSTPEMVYAQRFIRAFLNLLQQEINSYPSPELQEECENL
DQGDIHQEAPMNERIPFPGMSESGSNQVLEDMGKNESRIKKSMKENTKEPLSTMPEMRDD
YEEDEYFTEENAKRKKPQECEKAQEKNKKNLETTVETSGACNDYDACDLVQDSGECQNYI
LKWYYDKEQKMCGQFWYGGCGGNKNRFETQEECGFLCMESS
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggagacattttcaagattaggccctttgaggacactgggcagctggagaacagatacg
atttgcagtttggaatgcatcatagatctttctatagcaattgatatttcaaggagcatg
cagccatcatccacaatgcttctgaaacagagactgcaagcattcctccccagacttcta
ctccagatgaaatcactgccaaataccagctgtaatgctccagttgacattgggtttaag
ttccaagtattggcacagaacaaacaattaatctttgactctggttttgaagactataat
gaagagatcatccagaagttcttagatacgcagagcactgtggacacctacatgaatgca
gactttttgcaggcacttgaggagaacttctttaatgcgacctctgctaaagttaaggtt
ctgttagtattttcagatggactggatgattcaccggaagacctgaagaaagcagcagac
tcacttcgctttaaaggtcttgatgcacttctattagttggcctggacaatacacagaac
ttgactgaattttgggaaatagagtttggcagagggtttggatacaatgaacctctgagt
gttgggtttgaagatattgcaaacatcttgcagagaaaccttgatactgttgcagaaaga
aaatgctgtaaggttatttgtaagtgtcttggagaaagtggtgatcatggtgtccgggga
aatcctggaaggaagggaagttcaggttacagagggtctcctggccatcctggtgaggaa
ggtgggattggggagagaggcccagctggtttcagtgggactcaaggagacaggggatgt
ccaggtgccagaggccataagggggccagaggctatagaggaacccagggtgaacatggt
gagagtggatttgatggtactaatggagagcagggagaacgtggacttcctggaccttct
ggagagaaaggcagcagaggaaaatggggcagaaaaggccgcagaggagaaccaggtgaa
cgaggagaatctggtctaagaggagatcatggagatcctggggctaacaataatgttagt
ggccctaagggtgaaaagggaagcctagcaccacagggagacccaggcccatgtggactc
caaggagagcagggttatgctggcctagatggtgcagcaggtcgaagaggccctccaggt
ataaagggtgagaaaggacatctgggagaaacaggttacacaggagaaactggtcttcca
ggcccacaggggccaaggggaccacaagggatcaaaggacctccaggaccacaaggcatg
ccaggacctctgggtagtctggggacacctggttcacctggctctgttggaaagttaggt
gcaagaggagcaaagggtgaacctggtgaccctggagagaagggcttagctggaccacct
ggacagagaggcattcctggcatggatggcagagacgcctatggtcctgaaggaagcaaa
ggagcaaagggagaatctggattcataggacatcctggtccagagggagaagaaggagat
cagggcattccaggaggggaaggacccaaaggaattaggggtagaagaggtaatactgga
gcaccaggttccctgggagatccaggtgaccaaggaccatcaggacctatgggtgccaag
ggaccagtgggcaccattttaatggaaccttgtgaacttgtgaatttcacccgaaaaaac
tgcccatgctcatcagaaacatgcccagcttatccaactgaagtggtttttgccttggat
atgtctgacgatgttacaccagctgcatttgaaagaatgaggaacattgttatgttattg
ctgaagaccattaagatcagtgaaagcaattgcccaacaggagctcgtgtctcagttatt
tctttcaataccaacatgcactacctcattcgattctctgaatttcaaaaaaacaacttg
ctgctacaagcagtccagagaatcccgctagagagatccagtggaaaacgaaatattggg
gcagccatgagatttgttgcaagaaatgtcttcaaacgtgttcgtcagggcatcctcaca
agaaaagttgccctattttttgccaatggtccatcgcaggatgatgttgccatcagtact
gctgtgcttgagttgagtgccttggatatcactccagtggttattgccttcagtgaagtg
ccaaatgtcagacgtgccttctctattgatgacacaagaagatttcaattatttgtctgg
gaaagtcaacaggatgaaaatttggagggcatcacatattgtactctttgctttgataaa
tgcaacccaagaaccaactgtgaggtgcctttttctcccctggttcagatggatatggat
ataacatacatcatggagagctctcgcagcattagcagtgaagaatttcagagagccaaa
gactttgtgagcaacatgttggatcagtttgtcatttcctcacagccaaatgagtcatac
ggaggcatcagagtggcattggtgcagcaggctcccaggggcttcctgcctgacagaaac
cagacacctgtggccttggagtttgacctagtcacatacagcaataaagatttgatgaag
aaacacatccaagagtctgttcaccagctggaagggccatcagccattgcttctgctcta
cagtggacagttgaaaacgtattctttaaagcccccagacaaagaaaacacagggtgata
tttacaatagtcggaagcaaaacaagcacgtgggacagagaaaggctgagagagatttca
ctaggagccaagtgccaaggattcaccttgttcactcttgcacttggcagtggtgtgagt
gacagtcagttgatggagctgtcaagctcccccacagaccagcactcactgacactgggc
agggtttccacaccggagatggtgtatgctcagaggtttatccgggcattcctaaatctt
ctacaacaagaaattaacagttatccttcacctgagctacaagaagaatgtgaaaacttg
gatcagggagacatacatcaggaagcacccatgaatgaaaggataccttttcctggaatg
tctgaaagtggttccaatcaagttttagaagacatggggaaaaatgaaagtagaatcaag
aagagtatgaaagagaacaccaaagaacctctatctacaatgccagaaatgagagatgat
tatgaggaggatgagtatttcacagaggaaaatgctaaaaggaaaaagcctcaagagtgt
gaaaaagctcaggagaagaacaagaaaaacttagagacaacagtagaaactagtggtgcc
tgtaatgattatgatgcatgtgaccttgttcaagatagtggagaatgtcagaattacatt
ttgaagtggtactacgacaaagagcagaaaatgtgtggtcagttctggtatgggggctgt
ggaggcaataaaaatagatttgaaacacaagaagaatgtggattcttgtgtatggagtcc
tcctaa
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integrated database retrieval system
